FFCP PHASE1:Mm9::chr6:125215605..125215616,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=73870|HGNC=|MCL_coexpression_id=68|UniProt=|association_with_transcript=62bp_to_NR_015527,uc009duh.1_5end|description=CAGE_peak_3_at_4930417O13Rik_5end|id=chr6:125215605..125215616,+|ontology_enrichment_celltype=CL:0000791!4.68e-28!9;CL:0000789!4.68e-28!9;CL:0002420!4.68e-28!9;CL:0002419!4.68e-28!9;CL:0000790!4.68e-28!9;CL:0000624!3.74e-25!8;CL:0000838!3.78e-25!12;CL:0000542!4.62e-23!13;CL:0000051!4.62e-23!13;CL:0000084!1.20e-22!11;CL:0000827!1.20e-22!11;CL:0000893!2.73e-19!6;CL:0002489!2.73e-19!6;CL:0000898!2.73e-19!6;CL:0000809!2.73e-19!6;CL:0000810!2.73e-19!6;CL:0000895!2.73e-19!6;CL:0000808!2.73e-19!6;CL:0000894!2.73e-19!6;CL:0000806!2.73e-19!6;CL:0000807!2.73e-19!6;CL:0000805!2.73e-19!6;CL:0002425!2.73e-19!6;CL:0002436!2.73e-19!6;CL:0002427!2.73e-19!6;CL:0002428!2.73e-19!6;CL:0002429!2.73e-19!6;CL:0002433!2.73e-19!6;CL:0002431!2.73e-19!6;CL:0002432!2.73e-19!6;CL:0000738!3.65e-17!17;CL:0002087!3.65e-17!17;CL:0002031!4.94e-11!25;CL:0000988!3.44e-08!32;CL:0002032!3.44e-08!32;CL:0000037!3.44e-08!32;CL:0000566!3.44e-08!32;CL:0000837!3.44e-08!32|ontology_enrichment_celltype_v019_2=CL:0000791,4.97e-77,9;CL:0000789,4.97e-77,9;CL:0002420,4.97e-77,9;CL:0002419,4.97e-77,9;CL:0000790,4.97e-77,9;CL:0000624,1.15e-66,8;CL:0000084,4.29e-63,11;CL:0000827,4.29e-63,11;CL:0000838,7.26e-58,12;CL:0000542,1.94e-53,13;CL:0000051,1.94e-53,13;CL:0000893,6.32e-46,6;CL:0002489,6.32e-46,6;CL:0000898,6.32e-46,6;CL:0000809,6.32e-46,6;CL:0000810,6.32e-46,6;CL:0000895,6.32e-46,6;CL:0000808,6.32e-46,6;CL:0000894,6.32e-46,6;CL:0000806,6.32e-46,6;CL:0000807,6.32e-46,6;CL:0000805,6.32e-46,6;CL:0002425,6.32e-46,6;CL:0002436,6.32e-46,6;CL:0002427,6.32e-46,6;CL:0002428,6.32e-46,6;CL:0002429,6.32e-46,6;CL:0002433,6.32e-46,6;CL:0002431,6.32e-46,6;CL:0002432,6.32e-46,6;CL:0000738,6.20e-41,17;CL:0002087,6.20e-41,17;CL:0002031,6.66e-28,25;CL:0000988,7.89e-22,32;CL:0002032,7.89e-22,32;CL:0000037,7.89e-22,32;CL:0000837,7.89e-22,32;CL:0002320,3.33e-15,46;CL:0000134,3.33e-15,46;CL:0000219,5.97e-13,54;CL:0000815,4.30e-12,1;CL:0000792,4.30e-12,1;CL:0000625,5.53e-12,1;CL:0000723,1.22e-07,91;CL:0000048,1.22e-07,91;CL:0000034,3.71e-07,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!1.10e-34!23;UBERON:0000974!1.10e-34!23;UBERON:0004807!1.10e-34!23;UBERON:0005058!1.10e-34!23;UBERON:0003351!1.10e-34!23;UBERON:0009113!1.10e-34!23;UBERON:0003295!1.10e-34!23;UBERON:0009722!1.10e-34!23;UBERON:0005562!1.10e-34!23;UBERON:0007690!1.10e-34!23;UBERON:0006562!4.39e-33!24;UBERON:0003408!4.39e-33!24;UBERON:0001557!4.39e-33!24;UBERON:0001042!4.39e-33!24;UBERON:0008814!4.39e-33!24;UBERON:0009145!4.39e-33!24;UBERON:0004177!5.80e-30!29;UBERON:0000072!5.38e-29!27;UBERON:0000063!1.62e-21!35;UBERON:0002193!1.09e-18!48;UBERON:0002390!6.47e-18!45;UBERON:0003061!6.47e-18!45;UBERON:0000065!7.99e-18!41;UBERON:0001004!2.60e-17!42;UBERON:0005057!2.40e-15!51;UBERON:0002368!1.59e-12!60;UBERON:0003929!2.41e-12!55;UBERON:0002405!1.61e-11!70;UBERON:0002530!2.91e-11!65;UBERON:0000490!4.47e-11!66;UBERON:0003081!1.51e-10!88;UBERON:0000949!8.63e-10!72;UBERON:0000153!1.16e-09!94;UBERON:0005911!4.26e-09!69;UBERON:0007811!1.31e-08!86;UBERON:0000064!5.81e-07!99;UBERON:0001041!8.55e-07!92|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.33e-15,46;UBERON:0002370,3.02e-12,23;UBERON:0000974,3.02e-12,23;UBERON:0004807,3.02e-12,23;UBERON:0005058,3.02e-12,23;UBERON:0003351,3.02e-12,23;UBERON:0009113,3.02e-12,23;UBERON:0003295,3.02e-12,23;UBERON:0009722,3.02e-12,23;UBERON:0005562,3.02e-12,23;UBERON:0007690,3.02e-12,23;UBERON:0006562,9.57e-12,24;UBERON:0003408,9.57e-12,24;UBERON:0001557,9.57e-12,24;UBERON:0001042,9.57e-12,24;UBERON:0008814,9.57e-12,24;UBERON:0009145,9.57e-12,24;UBERON:0000072,1.83e-10,27;UBERON:0004177,9.33e-10,29;UBERON:0005057,9.33e-10,29;UBERON:0000077,4.11e-08,35;UBERON:0007811,6.85e-08,36;UBERON:0000065,6.07e-07,41;UBERON:0001004,8.83e-07,42|phase1_expression=0,0,0,0,0,0,0,2.84071311571468,17.317012824655,17.0867104215055,17.8066686954525,9.49288692044503,1.19840510951844,0.874204024189974,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,3.62681071005672,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0,0,0.139951452323658,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0,0,0.179026695667481,0.39736270956253,0.360586348559907,0.295379054349154,0.302899349844443,0.228620419965,0.504130925684203,0.682205165178267,0.673482891482306,0.467507608726276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p3@4930417O13Rik}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=73870 | |||
|HGNC= | |||
|MCL_coexpression_id=68 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=62bp_to_NR_015527,uc009duh.1_5end | |||
|cluster_id=chr6:125215605..125215616,+ | |||
|description=CAGE_peak_3_at_4930417O13Rik_5end | |||
|id=chr6:125215605..125215616,+ | |||
|ontology_enrichment_celltype=CL:0000791!4.68e-28!9;CL:0000789!4.68e-28!9;CL:0002420!4.68e-28!9;CL:0002419!4.68e-28!9;CL:0000790!4.68e-28!9;CL:0000624!3.74e-25!8;CL:0000838!3.78e-25!12;CL:0000542!4.62e-23!13;CL:0000051!4.62e-23!13;CL:0000084!1.20e-22!11;CL:0000827!1.20e-22!11;CL:0000893!2.73e-19!6;CL:0002489!2.73e-19!6;CL:0000898!2.73e-19!6;CL:0000809!2.73e-19!6;CL:0000810!2.73e-19!6;CL:0000895!2.73e-19!6;CL:0000808!2.73e-19!6;CL:0000894!2.73e-19!6;CL:0000806!2.73e-19!6;CL:0000807!2.73e-19!6;CL:0000805!2.73e-19!6;CL:0002425!2.73e-19!6;CL:0002436!2.73e-19!6;CL:0002427!2.73e-19!6;CL:0002428!2.73e-19!6;CL:0002429!2.73e-19!6;CL:0002433!2.73e-19!6;CL:0002431!2.73e-19!6;CL:0002432!2.73e-19!6;CL:0000738!3.65e-17!17;CL:0002087!3.65e-17!17;CL:0002031!4.94e-11!25;CL:0000988!3.44e-08!32;CL:0002032!3.44e-08!32;CL:0000037!3.44e-08!32;CL:0000566!3.44e-08!32;CL:0000837!3.44e-08!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.97e-77,9;CL:0000789,4.97e-77,9;CL:0002420,4.97e-77,9;CL:0002419,4.97e-77,9;CL:0000790,4.97e-77,9;CL:0000624,1.15e-66,8;CL:0000084,4.29e-63,11;CL:0000827,4.29e-63,11;CL:0000838,7.26e-58,12;CL:0000542,1.94e-53,13;CL:0000051,1.94e-53,13;CL:0000893,6.32e-46,6;CL:0002489,6.32e-46,6;CL:0000898,6.32e-46,6;CL:0000809,6.32e-46,6;CL:0000810,6.32e-46,6;CL:0000895,6.32e-46,6;CL:0000808,6.32e-46,6;CL:0000894,6.32e-46,6;CL:0000806,6.32e-46,6;CL:0000807,6.32e-46,6;CL:0000805,6.32e-46,6;CL:0002425,6.32e-46,6;CL:0002436,6.32e-46,6;CL:0002427,6.32e-46,6;CL:0002428,6.32e-46,6;CL:0002429,6.32e-46,6;CL:0002433,6.32e-46,6;CL:0002431,6.32e-46,6;CL:0002432,6.32e-46,6;CL:0000738,6.20e-41,17;CL:0002087,6.20e-41,17;CL:0002031,6.66e-28,25;CL:0000988,7.89e-22,32;CL:0002032,7.89e-22,32;CL:0000037,7.89e-22,32;CL:0000837,7.89e-22,32;CL:0002320,3.33e-15,46;CL:0000134,3.33e-15,46;CL:0000219,5.97e-13,54;CL:0000815,4.30e-12,1;CL:0000792,4.30e-12,1;CL:0000625,5.53e-12,1;CL:0000723,1.22e-07,91;CL:0000048,1.22e-07,91;CL:0000034,3.71e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!1.10e-34!23;UBERON:0000974!1.10e-34!23;UBERON:0004807!1.10e-34!23;UBERON:0005058!1.10e-34!23;UBERON:0003351!1.10e-34!23;UBERON:0009113!1.10e-34!23;UBERON:0003295!1.10e-34!23;UBERON:0009722!1.10e-34!23;UBERON:0005562!1.10e-34!23;UBERON:0007690!1.10e-34!23;UBERON:0006562!4.39e-33!24;UBERON:0003408!4.39e-33!24;UBERON:0001557!4.39e-33!24;UBERON:0001042!4.39e-33!24;UBERON:0008814!4.39e-33!24;UBERON:0009145!4.39e-33!24;UBERON:0004177!5.80e-30!29;UBERON:0000072!5.38e-29!27;UBERON:0000063!1.62e-21!35;UBERON:0002193!1.09e-18!48;UBERON:0002390!6.47e-18!45;UBERON:0003061!6.47e-18!45;UBERON:0000065!7.99e-18!41;UBERON:0001004!2.60e-17!42;UBERON:0005057!2.40e-15!51;UBERON:0002368!1.59e-12!60;UBERON:0003929!2.41e-12!55;UBERON:0002405!1.61e-11!70;UBERON:0002530!2.91e-11!65;UBERON:0000490!4.47e-11!66;UBERON:0003081!1.51e-10!88;UBERON:0000949!8.63e-10!72;UBERON:0000153!1.16e-09!94;UBERON:0005911!4.26e-09!69;UBERON:0007811!1.31e-08!86;UBERON:0000064!5.81e-07!99;UBERON:0001041!8.55e-07!92 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.33e-15,46;UBERON:0002370,3.02e-12,23;UBERON:0000974,3.02e-12,23;UBERON:0004807,3.02e-12,23;UBERON:0005058,3.02e-12,23;UBERON:0003351,3.02e-12,23;UBERON:0009113,3.02e-12,23;UBERON:0003295,3.02e-12,23;UBERON:0009722,3.02e-12,23;UBERON:0005562,3.02e-12,23;UBERON:0007690,3.02e-12,23;UBERON:0006562,9.57e-12,24;UBERON:0003408,9.57e-12,24;UBERON:0001557,9.57e-12,24;UBERON:0001042,9.57e-12,24;UBERON:0008814,9.57e-12,24;UBERON:0009145,9.57e-12,24;UBERON:0000072,1.83e-10,27;UBERON:0004177,9.33e-10,29;UBERON:0005057,9.33e-10,29;UBERON:0000077,4.11e-08,35;UBERON:0007811,6.85e-08,36;UBERON:0000065,6.07e-07,41;UBERON:0001004,8.83e-07,42 | |||
|phase1_expression=0,0,0,0,0,0,0,2.84071311571468,17.317012824655,17.0867104215055,17.8066686954525,9.49288692044503,1.19840510951844,0.874204024189974,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,3.62681071005672,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0,0,0.139951452323658,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0,0,0.179026695667481,0.39736270956253,0.360586348559907,0.295379054349154,0.302899349844443,0.228620419965,0.504130925684203,0.682205165178267,0.673482891482306,0.467507608726276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@4930417O13Rik | |||
}} |
Latest revision as of 17:03, 26 September 2015
Short description: | p3@4930417O13Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_4930417O13Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:68 |
Association with transcript: | 62bp_to_NR_015527, uc009duh.1_5end |
EntrezGene: | 4930417O13Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 3.33e-15 | 46 |
thymus | 3.02e-12 | 23 |
neck | 3.02e-12 | 23 |
respiratory system epithelium | 3.02e-12 | 23 |
hemolymphoid system gland | 3.02e-12 | 23 |
pharyngeal epithelium | 3.02e-12 | 23 |
thymic region | 3.02e-12 | 23 |
pharyngeal gland | 3.02e-12 | 23 |
entire pharyngeal arch endoderm | 3.02e-12 | 23 |
thymus primordium | 3.02e-12 | 23 |
early pharyngeal endoderm | 3.02e-12 | 23 |
pharynx | 9.57e-12 | 24 |
gland of gut | 9.57e-12 | 24 |
upper respiratory tract | 9.57e-12 | 24 |
chordate pharynx | 9.57e-12 | 24 |
pharyngeal arch system | 9.57e-12 | 24 |
pharyngeal region of foregut | 9.57e-12 | 24 |
segment of respiratory tract | 1.83e-10 | 27 |
hemopoietic organ | 9.33e-10 | 29 |
immune organ | 9.33e-10 | 29 |
mixed endoderm/mesoderm-derived structure | 4.11e-08 | 35 |
craniocervical region | 6.85e-08 | 36 |
respiratory tract | 6.07e-07 | 41 |
respiratory system | 8.83e-07 | 42 |