FFCP PHASE1:Hg19::chrX:110539476..110539484,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1641 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=2714 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-4bp_to_AK002120_5end | |||
|cluster_id=chrX:110539476..110539484,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_15_at_DCX_5end | |||
|id=chrX:110539476..110539484,- | |||
|ontology_enrichment_celltype=CL:0000540!2.21e-13!6;CL:0000031!2.21e-13!6;CL:0000404!2.21e-13!6;CL:0000047!3.62e-10!8 | |||
|ontology_enrichment_celltype_v019=CL:0000540;8.01e-23;6!CL:0000404;8.01e-23;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,8.47e-23,6;CL:0000031,8.47e-23,6;CL:0000404,8.47e-23,6;CL:0000047,2.19e-17,8 | |||
|ontology_enrichment_development_v019=CL:0000031;8.01e-23;6 | |||
|ontology_enrichment_disease=DOID:171!6.52e-08!10;DOID:4362!1.12e-07!5 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000349!3.47e-15!5;UBERON:0001869!3.85e-15!32;UBERON:0002791!1.15e-14!33;UBERON:0002020!3.23e-14!34;UBERON:0003528!3.23e-14!34;UBERON:0001893!3.23e-14!34;UBERON:0002619!9.37e-13!22;UBERON:0001017!2.93e-12!82;UBERON:0000073!3.13e-12!94;UBERON:0001016!3.13e-12!94;UBERON:0002780!1.12e-11!41;UBERON:0001890!1.12e-11!41;UBERON:0006240!1.12e-11!41;UBERON:0005743!1.31e-11!86;UBERON:0003080!2.22e-11!42;UBERON:0000956!3.14e-11!25;UBERON:0000203!3.14e-11!25;UBERON:0000924!1.16e-10!173;UBERON:0006601!1.16e-10!173;UBERON:0001950!5.59e-10!20;UBERON:0001871!6.13e-10!7;UBERON:0001874!1.25e-09!1;UBERON:0001882!2.67e-09!1;UBERON:0005403!2.67e-09!1;UBERON:0000369!4.59e-09!4;UBERON:0002435!4.59e-09!4;UBERON:0000204!4.59e-09!4;UBERON:0010082!4.59e-09!4;UBERON:0002420!1.03e-08!9;UBERON:0007245!1.03e-08!9;UBERON:0010009!1.03e-08!9;UBERON:0010011!1.03e-08!9;UBERON:0000454!1.03e-08!9;UBERON:0004121!3.11e-08!169;UBERON:0001049!3.62e-08!57;UBERON:0005068!3.62e-08!57;UBERON:0006241!3.62e-08!57;UBERON:0007135!3.62e-08!57;UBERON:0000955!3.67e-08!69;UBERON:0006238!3.67e-08!69;UBERON:0002616!7.34e-08!59;UBERON:0003056!1.42e-07!61;UBERON:0002346!1.43e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;5.40e-15;20!UBERON:0002619;9.23e-14;22!UBERON:0000922;1.56e-12;49!UBERON:0000956;2.90e-12;25!UBERON:0000203;2.90e-12;25!UBERON:0002114;3.06e-12;2!UBERON:0002791;2.43e-09;32!UBERON:0001869;3.97e-09;32!UBERON:0003528;8.28e-09;34!UBERON:0002020;8.28e-09;34!UBERON:0002021;5.35e-08;5!UBERON:0001872;5.73e-08;5!UBERON:0002108;7.25e-08;4!UBERON:0001893;1.60e-07;34!UBERON:0002780;2.04e-07;41!UBERON:0001890;2.04e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,5.40e-15,20;UBERON:0002619,9.23e-14,22;UBERON:0002114,2.89e-12,2;UBERON:0000956,2.90e-12,25;UBERON:0000203,2.90e-12,25;UBERON:0001017,2.04e-10,81;UBERON:0002791,8.02e-10,32;UBERON:0001869,8.02e-10,32;UBERON:0001016,1.94e-09,89;UBERON:0003528,2.65e-09,34;UBERON:0002020,2.65e-09,34;UBERON:0001893,2.65e-09,34;UBERON:0002021,5.35e-08,5;UBERON:0001872,5.73e-08,5;UBERON:0002108,7.01e-08,4;UBERON:0002780,7.23e-08,41;UBERON:0001890,7.23e-08,41;UBERON:0003080,7.23e-08,41;UBERON:0006240,7.23e-08,41 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31986643833309,0,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.0607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0.160753148465019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0.212574920101683,0.123935764259002,0,0,0,0,0,0,0.0642292250964595,0,0,0,7.31007919042983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.56369770821863,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74540276136151,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p15@DCX | |||
}} |
Latest revision as of 01:37, 19 September 2015
Short description: | p15@DCX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_DCX_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -4bp_to_AK002120_5end |
EntrezGene: | DCX |
HGNC: | 2714 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 8.47e-23 | 6 |
neuroblast | 8.47e-23 | 6 |
electrically signaling cell | 8.47e-23 | 6 |
neuronal stem cell | 2.19e-17 | 8 |
Ontology term | p-value | n |
---|---|---|
neocortex | 5.40e-15 | 20 |
regional part of cerebral cortex | 9.23e-14 | 22 |
duodenum | 2.89e-12 | 2 |
cerebral cortex | 2.90e-12 | 25 |
pallium | 2.90e-12 | 25 |
central nervous system | 2.04e-10 | 81 |
regional part of telencephalon | 8.02e-10 | 32 |
cerebral hemisphere | 8.02e-10 | 32 |
nervous system | 1.94e-09 | 89 |
brain grey matter | 2.65e-09 | 34 |
gray matter | 2.65e-09 | 34 |
telencephalon | 2.65e-09 | 34 |
occipital lobe | 5.35e-08 | 5 |
parietal lobe | 5.73e-08 | 5 |
small intestine | 7.01e-08 | 4 |
regional part of forebrain | 7.23e-08 | 41 |
forebrain | 7.23e-08 | 41 |
anterior neural tube | 7.23e-08 | 41 |
future forebrain | 7.23e-08 | 41 |