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FFCP PHASE1:Mm9::chr7:148513574..148513593,-: Difference between revisions

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{{FFCP|EntrezGene=54006|HGNC=|UniProt=Q9Z1T5,Q8BUW3|association_with_transcript=30bp_to_ENSMUST00000080553,NM_016874,NR_027769,uc009kkn.2,uc009kko.2,uc012fwv.1,uc012fww.1_5end|description=CAGE_peak_5_at_Deaf1_5end|id=chr7:148513574..148513593,-|ontology_enrichment_celltype=CL:0000117!4.56e-08!23;CL:0000337!4.56e-08!23|ontology_enrichment_celltype_v019_2=CL:0000117,6.89e-09,23;CL:0000337,6.89e-09,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!2.89e-10!34;UBERON:0002791!3.20e-09!29;UBERON:0003528!3.20e-09!29;UBERON:0001893!3.20e-09!29;UBERON:0004121!4.53e-09!102;UBERON:0000924!4.53e-09!102;UBERON:0006601!4.53e-09!102;UBERON:0000033!1.59e-08!63;UBERON:0000956!3.46e-08!21;UBERON:0001869!3.46e-08!21;UBERON:0000203!3.46e-08!21;UBERON:0001049!7.44e-08!52;UBERON:0005068!7.44e-08!52;UBERON:0006241!7.44e-08!52;UBERON:0007135!7.44e-08!52;UBERON:0000955!1.55e-07!50;UBERON:0006238!1.55e-07!50;UBERON:0001017!1.94e-07!73;UBERON:0005743!1.94e-07!73;UBERON:0002616!1.97e-07!49;UBERON:0000073!2.61e-07!75;UBERON:0001016!2.61e-07!75;UBERON:0003056!3.77e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0004121,4.88e-12,95;UBERON:0000924,4.88e-12,95;UBERON:0006601,4.88e-12,95;UBERON:0002020,6.29e-11,34;UBERON:0010371,7.37e-11,73;UBERON:0003528,1.13e-09,29;UBERON:0002791,1.13e-09,29;UBERON:0001893,1.13e-09,29;UBERON:0002346,2.91e-09,64;UBERON:0003075,2.91e-09,64;UBERON:0007284,2.91e-09,64;UBERON:0000956,8.24e-09,21;UBERON:0001869,8.24e-09,21;UBERON:0000203,8.24e-09,21;UBERON:0000073,1.22e-08,54;UBERON:0001049,4.71e-08,52;UBERON:0005068,4.71e-08,52;UBERON:0006241,4.71e-08,52;UBERON:0007135,4.71e-08,52;UBERON:0001017,6.72e-08,73;UBERON:0001016,6.90e-08,75;UBERON:0003056,1.53e-07,49;UBERON:0000955,2.22e-07,47;UBERON:0006238,2.22e-07,47;UBERON:0002616,2.93e-07,46|phase1_expression=0.640595388419176,2.09385244583617,1.36499771816861,1.20985684522732,4.50806156951712,0.671517087647559,0.934450562382103,1.29123323441576,0.140788722151667,0,0.34243593645101,0.638177271962691,0,0.786783621770977,1.33243904726265,0.202475267389826,0,0.157731082679119,0.411343300817216,0.84877930359606,1.78590909317247,0.695036658406197,0.261199789138935,0.47997726838022,0.45881856213434,0.57423196411502,2.15380998079537,1.07735616342945,0.380046838912748,0.504060259519861,0.443461021310609,0.635030673459631,1.23012957516914,0,0.288851619751275,1.16364251750945,0.408338712524738,1.25559489221072,1.5626706890476,0,0.588231488031014,0.683045484958446,2.42755176515577,1.25896817975577,0.506884656097573,0.550640256485045,3.12956537739216,1.09012578190223,1.75748946187577,0.777719596297134,1.39986421625363,0,0.335565212115473,0.725362142011344,0.336093799142464,0.771778308107841,0.85960031981627,1.54701627683233,5.46254444320914,4.7609188134483,6.33831403506179,1.0165335962074,1.77858959222228,1.3498495759221,0.988866362566974,0,0.898800331555214,1.53687322128622,3.31806759387129,3.37514845829227,3.15487442027073,1.42825492201902,1.32521124570968,2.44981598429908,2.39613677545591,1.83843757322004,4.40463523997555,1.14918604276669,0.921639199537461,3.03338461779446,2.28719109006024,1.56274011167028,1.3959149950069,0.56276261003168,1.22238598221448,1.76777151284201,1.28134512719193,1.86399445825301,0.37863096666592,1.73814588245607,0.869593466105033,1.72084775396277,0,1.07940638327563,0.649776417447669,1.34408066129201,1.68533304158102,1.02258193546835,0.779358013808606,0,0.704217098883403,1.28326477414318,0,0,0.865964164044856,0.253359865475099,0.505524445014783,0.91347103775248,1.29468941823586,1.1875371125186,0.520455980298408,0.608930956624282,0.461230994512117,0.452167921657868,0.23517741427141,0.502666365318702,1.23597483867187,2.02439099687876,1.76922110389975,0.808834249737046,0.441683036920787,0.484875253135222,0,4.09893115816166,3.35114730901528,1.02182822083437,0.359445373517761,0.599902730993408,0.254140454146129,2.54644086988199,0.915001205637253,5.90575454930463,3.82413504423008,4.09144731728529,1.24672826735736,0.811206315338788,0.611036183101898,0.622034853050465,0.505445516867349,1.68353484709179,0.780722657776222,1.14951052216736,1.80062129805349,1.50704817835715,1.56483948048054,1.40925092313335,2.52994656311268,2.06962696591213,1.07783996466421,0.756424320671277,1.75951124163949,0.657587197282725,1.39023624612799,0.348252166522167,3.08673204611915,0.796137067273973,0,0.257347907114715,0.568326998791185,0.828503090142008,0.234526059981096,0.900310307305074,0.710234206755631,0.983821158737019,0.925602677324269,1.62773761325285,1.60964040839772,0.700592054203017,1.15191894939436,1.31333971263276,1.86458261955468,1.60819986167866,0.219550115291051,0.939444931322602,4.6263788684108,3.2929475961371,0,0.793351699990633,0.213288250535234,0.696710015581316,0.38660238396628,0.605050573870028,0.889512175379481,0.570676878337677,0,0.658795818896044,1.50801125280162,0.994782360205754,1.36474860983384,1.79763881730844,0.864552199498777,1.1948476395262,0.948339504765408,0.456994050438915,0,0.61095398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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=54006
|HGNC=
|TSSclassifier=NA
|UniProt=Q9Z1T5,Q8BUW3
|association_with_transcript=30bp_to_ENSMUST00000080553,NM_016874,NR_027769,uc009kkn.2,uc009kko.2,uc012fwv.1,uc012fww.1_5end
|cluster_id=chr7:148513574..148513593,-
|description=CAGE_peak_5_at_Deaf1_5end
|id=chr7:148513574..148513593,-
|ontology_enrichment_celltype=CL:0000117!4.56e-08!23;CL:0000337!4.56e-08!23
|ontology_enrichment_celltype_v019_2=CL:0000117,6.89e-09,23;CL:0000337,6.89e-09,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002020!2.89e-10!34;UBERON:0002791!3.20e-09!29;UBERON:0003528!3.20e-09!29;UBERON:0001893!3.20e-09!29;UBERON:0004121!4.53e-09!102;UBERON:0000924!4.53e-09!102;UBERON:0006601!4.53e-09!102;UBERON:0000033!1.59e-08!63;UBERON:0000956!3.46e-08!21;UBERON:0001869!3.46e-08!21;UBERON:0000203!3.46e-08!21;UBERON:0001049!7.44e-08!52;UBERON:0005068!7.44e-08!52;UBERON:0006241!7.44e-08!52;UBERON:0007135!7.44e-08!52;UBERON:0000955!1.55e-07!50;UBERON:0006238!1.55e-07!50;UBERON:0001017!1.94e-07!73;UBERON:0005743!1.94e-07!73;UBERON:0002616!1.97e-07!49;UBERON:0000073!2.61e-07!75;UBERON:0001016!2.61e-07!75;UBERON:0003056!3.77e-07!49
|ontology_enrichment_uberon_v019_2=UBERON:0004121,4.88e-12,95;UBERON:0000924,4.88e-12,95;UBERON:0006601,4.88e-12,95;UBERON:0002020,6.29e-11,34;UBERON:0010371,7.37e-11,73;UBERON:0003528,1.13e-09,29;UBERON:0002791,1.13e-09,29;UBERON:0001893,1.13e-09,29;UBERON:0002346,2.91e-09,64;UBERON:0003075,2.91e-09,64;UBERON:0007284,2.91e-09,64;UBERON:0000956,8.24e-09,21;UBERON:0001869,8.24e-09,21;UBERON:0000203,8.24e-09,21;UBERON:0000073,1.22e-08,54;UBERON:0001049,4.71e-08,52;UBERON:0005068,4.71e-08,52;UBERON:0006241,4.71e-08,52;UBERON:0007135,4.71e-08,52;UBERON:0001017,6.72e-08,73;UBERON:0001016,6.90e-08,75;UBERON:0003056,1.53e-07,49;UBERON:0000955,2.22e-07,47;UBERON:0006238,2.22e-07,47;UBERON:0002616,2.93e-07,46
|phase1_expression=0.640595388419176,2.09385244583617,1.36499771816861,1.20985684522732,4.50806156951712,0.671517087647559,0.934450562382103,1.29123323441576,0.140788722151667,0,0.34243593645101,0.638177271962691,0,0.786783621770977,1.33243904726265,0.202475267389826,0,0.157731082679119,0.411343300817216,0.84877930359606,1.78590909317247,0.695036658406197,0.261199789138935,0.47997726838022,0.45881856213434,0.57423196411502,2.15380998079537,1.07735616342945,0.380046838912748,0.504060259519861,0.443461021310609,0.635030673459631,1.23012957516914,0,0.288851619751275,1.16364251750945,0.408338712524738,1.25559489221072,1.5626706890476,0,0.588231488031014,0.683045484958446,2.42755176515577,1.25896817975577,0.506884656097573,0.550640256485045,3.12956537739216,1.09012578190223,1.75748946187577,0.777719596297134,1.39986421625363,0,0.335565212115473,0.725362142011344,0.336093799142464,0.771778308107841,0.85960031981627,1.54701627683233,5.46254444320914,4.7609188134483,6.33831403506179,1.0165335962074,1.77858959222228,1.3498495759221,0.988866362566974,0,0.898800331555214,1.53687322128622,3.31806759387129,3.37514845829227,3.15487442027073,1.42825492201902,1.32521124570968,2.44981598429908,2.39613677545591,1.83843757322004,4.40463523997555,1.14918604276669,0.921639199537461,3.03338461779446,2.28719109006024,1.56274011167028,1.3959149950069,0.56276261003168,1.22238598221448,1.76777151284201,1.28134512719193,1.86399445825301,0.37863096666592,1.73814588245607,0.869593466105033,1.72084775396277,0,1.07940638327563,0.649776417447669,1.34408066129201,1.68533304158102,1.02258193546835,0.779358013808606,0,0.704217098883403,1.28326477414318,0,0,0.865964164044856,0.253359865475099,0.505524445014783,0.91347103775248,1.29468941823586,1.1875371125186,0.520455980298408,0.608930956624282,0.461230994512117,0.452167921657868,0.23517741427141,0.502666365318702,1.23597483867187,2.02439099687876,1.76922110389975,0.808834249737046,0.441683036920787,0.484875253135222,0,4.09893115816166,3.35114730901528,1.02182822083437,0.359445373517761,0.599902730993408,0.254140454146129,2.54644086988199,0.915001205637253,5.90575454930463,3.82413504423008,4.09144731728529,1.24672826735736,0.811206315338788,0.611036183101898,0.622034853050465,0.505445516867349,1.68353484709179,0.780722657776222,1.14951052216736,1.80062129805349,1.50704817835715,1.56483948048054,1.40925092313335,2.52994656311268,2.06962696591213,1.07783996466421,0.756424320671277,1.75951124163949,0.657587197282725,1.39023624612799,0.348252166522167,3.08673204611915,0.796137067273973,0,0.257347907114715,0.568326998791185,0.828503090142008,0.234526059981096,0.900310307305074,0.710234206755631,0.983821158737019,0.925602677324269,1.62773761325285,1.60964040839772,0.700592054203017,1.15191894939436,1.31333971263276,1.86458261955468,1.60819986167866,0.219550115291051,0.939444931322602,4.6263788684108,3.2929475961371,0,0.793351699990633,0.213288250535234,0.696710015581316,0.38660238396628,0.605050573870028,0.889512175379481,0.570676878337677,0,0.658795818896044,1.50801125280162,0.994782360205754,1.36474860983384,1.79763881730844,0.864552199498777,1.1948476395262,0.948339504765408,0.456994050438915,0,0.610953983535943,1.35766741017338,0.631222379012867,1.45444035385792,1.18088118383682,1.41298855057237,0.863780147452604,1.48226313543574,0.667380422864376,0.196558995113203,1.34917267430912,0.811440485554012,1.4470629585145,1.01850340712568,0.287696137450811,0.486405680325106,1.09824565275233,1.43768206527355,0.744281895337007,0.936113019343682,3.28352541331245,1.25578189465339,0.964887042726734,0.923765950833023,0.37898282354097,0.814824882210129,1.52770577197669,0.234690248288502,1.17254380209271,0.952174563544055,0.390267295715598,0.472905432318573,0.44292937929755,2.23236676120482,0.655453258862952,1.20879487306127,1.59113964439663,3.01582567878545,0,0.983528546038072,1.93155722413313,2.40825884981688,0.937693492737625,0.491804836130026,0.757412781613119,0.315508219416257,1.17131623288992,0.430846795465598,1.43381278771531,0.891194696329576,1.13230612315533,0,0.292255857911312,1.18586333383957,1.28528526568723,0.709700426041343,1.06839362200353,1.14020871547503,1.48473110675282,1.32745138339963,1.69946445308487,0.604647113929502,0,0.590603785761546,0.922305443831782,0.258428293168221,0.363533729477506,0.712994756769443,1.26414703174326,0,0,0.340439605753788,0.36012218806262,0.646793418913773,0.857348140126369,0.177340233642274,0.356737635204141,0.987294123612726,0,0.469343416127421,0.847328283455281,0.882113592219848,4.61681508236144,1.77610869365496,2.65376869683886,3.22305328808468,1.80554989719567,0.874442509889552,0.741701208042039,1.53783792718067,1.65109494370578,0.555583582109135,0.753473828018764,0.683471138605126,0.686334519619568,0.169978429993855,0,0.276399947608848,0.954670618015114,0.474503990371703,1.01659733563424,1.18805874903981,0.209088296014469,0.655087691238533,0.404593039154462,0.909188012978695,0.523511883968059,0.259229946583586,0,0.56369293868419,1.34564891439581,0.66183396182839,0.583353565032143,0.645799117388655,1.18269287843545,0.469428954583016,0.651021924219751,0.629156066554265,0.241584120826006,1.72818003754719,0.632022241256357,0.608175645870493,0.410843828659309,0.649604114888975,0.895133478337407,0.39736270956253,0.721172697119813,0.147689527174577,0.706765149637033,0.381034033274999,0.403304740547362,0.682205165178267,0.481059208201647,0.701261413089414,1.81384306892169,0.221985953374065,0.0897138566094757,0.335769232728157,0.386379188064381,1.12609485270709,1.09890974560359,0.857473516316263,1.00314420807073,2.25900737046827,1.84130094602871,2.29158205375759,2.57779773515531,0.685082519770642,1.5107877947794,0.675022500231806,1.35096360967266,2.71885445390523,3.62432218226274,0.93408612825759,0.798049746802062,1.53660245178721,1.70174701947806,1.04806581313991,2.02227859295016,1.55572709461131,1.64828045791115,1.60459604795908,1.26348605881899,1.01391719956096,0.943131706930381,1.40462261204824,2.04880487695582,1.7230640686684,1.42888107384922,1.73826488917283,2.89363830695558,0.824171801606613,1.91358596174717,1.02860775715625,0.70990322463735,0.953744759789284,2.0348498328526,1.88218760830661,1.86152137361688,1.09756783723664,0.526139422875686,1.62964936615034,0,1.77952527186261,1.57607171800902,2.45538625901814,1.70430525304563,1.35034627686799,1.74867404556562,1.16965804222704,0.859484216193193,1.53030665655075,1.54413993383661,0.231867835620421
|short_description=p5@Deaf1
}}

Latest revision as of 03:45, 26 September 2015

Short description:p5@Deaf1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Deaf1_5end
Coexpression cluster:NA
Association with transcript: 30bp_to_ENSMUST00000080553, NM_016874, NR_027769, uc009kkn.2, uc009kko.2, uc012fwv.1, uc012fww.1_5end
EntrezGene:Deaf1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Deaf1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.09
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.21
CD326+ enterocyte, pool2.CNhs13197.11849-124I44.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.67
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.93
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.29
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.64
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.79
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I12.15
GP2+ M cell, pool3.CNhs13240.11847-124I21.08
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42.43
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.26
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.51
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.76
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.40
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C35.46
Mouse Granule cells, donor2.CNhs12357.11731-123E34.76
Mouse Granule cells, donor3.CNhs12108.11636-122C76.34
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.32
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.38
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.15
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.45
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.40
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.15
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.03
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.29
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.22
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.86
Mouse Schwann, donor1.CNhs12507.11728-123D90.38
Mouse Schwann, donor2.CNhs12573.11746-123F91.74
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.69
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.02
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.87
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.91
accessory axillary lymph node, adult.CNhs10475.1063-29H91.29
adrenal gland, adult.CNhs10508.49-24D71.19
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A81.24
aorta, adult.CNhs10498.46-23H12.02
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B24.10
cerebellum, neonate N30.CNhs11135.1395-42I23.35
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.36
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A42.55
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F15.91
cortex, adult.CNhs10473.12-14D53.82
cortex, neonate N30.CNhs11107.1392-42F24.09
diencephalon, adult.CNhs10482.20-12F21.25
diencephalon, neonate N30.CNhs11201.1388-42B20.81
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G41.68
eyeball, embryo E12.CNhs11016.345-16C60.78
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C91.80
eyeball, embryo E17.CNhs11023.1261-18D41.51
eyeball, neonate N00.CNhs11207.633-15C61.56
eyeball, neonate N01.CNhs11140.1532-43E71.41
eyeball, neonate N02.CNhs11205.1551-44G82.53
eyeball, neonate N16.CNhs11188.777-19A22.07
forelimb, embryo E11.CNhs10596.335-25E21.08
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E21.76
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B53.09
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.98
heart, embryo E16.CNhs11021.457-17C60.93
heart, embryo E17.CNhs11025.479-18E51.63
heart, embryo E18.CNhs11030.1283-20G31.61
heart, neonate N00.CNhs11213.639-21E30.70
heart, neonate N03.CNhs11221.1349-25I21.15
heart, neonate N10.CNhs11118.749-24G11.31
heart, neonate N16.CNhs11209.782-15G11.86
heart, neonate N20.CNhs11127.821-26I61.61
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.94
hippocampus, adult.CNhs10478.13-16E84.63
hippocampus, neonate N00.CNhs11228.627-43G13.29
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A51.36
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E30.86
intestine, neonate N30.CNhs11131.1384-42G11.19
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C71.36
kidney, neonate N00.CNhs11214.646-21G70.63
kidney, neonate N10.CNhs11206.758-6D51.45
kidney, neonate N20.CNhs11113.832-19I11.18
kidney, neonate N25.CNhs11122.1353-25F31.41
kidney, neonate N30.CNhs11203.1385-42H10.86
liver, adult pregnant day01.CNhs10466.508-5B21.48
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E11.35
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F51.45
liver, embryo E17.CNhs10510.481-18A31.02
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G21.10
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A33.28
liver, neonate N25.CNhs11198.1368-26H11.26
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B10.92
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C51.53
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A61.17
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E62.23
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C71.21
lung, neonate N30.CNhs11133.1394-42H21.59
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H21.93
medulla oblongata, adult.CNhs10477.17-12C22.41
medulla oblongata, neonate N30.CNhs11200.1396-42A30.94
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H71.07
ovary, neonate N00.CNhs11217.1299-22I41.14
oviduct, adult pregnant day01.CNhs10500.988-6G61.48
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F41.70
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C34.62
skin, neonate N00.CNhs11124.650-25G41.78
skin, neonate N03.CNhs11215.662-22H32.65
skin, neonate N06.CNhs11097.693-20I53.22
skin, neonate N10.CNhs11108.762-6C41.81
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C90.74
spleen, adult.CNhs10465.25-2G21.54
spleen, embryo E16.CNhs11035.461-43C11.65
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.75
spleen, neonate N20.CNhs11112.824-19H10.68
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D41.19
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.91
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F51.35
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.65
testis, embryo E18.CNhs11027.503-18G51.18
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.63
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E21.73
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.65
thymus, embryo E17.CNhs10581.478-18C10.90
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.72
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.71
thymus, neonate N07.CNhs11211.713-19D30.38
thymus, neonate N10.CNhs11194.748-24E40.40
thymus, neonate N20.CNhs11186.820-7A20.68
thymus, neonate N25.CNhs11125.1362-25G70.48
thymus, neonate N30.CNhs11132.1393-42G20.70
tongue, adult.CNhs10499.32-1B41.81
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F51.13
uterus, adult.CNhs10509.92-27E51.10
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.58
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.62
whole body, embryo E11.CNhs11014.324-5I80.93
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H21.54
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F22.02
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.40
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.72
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.88
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.86
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.63
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.70
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C61.53
whole body, neonate N06.CNhs10515.692-21D11.54
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)6.89e-0923
neuroblast (sensu Vertebrata)6.89e-0923

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure4.88e-1295
ectoderm4.88e-1295
presumptive ectoderm4.88e-1295
gray matter6.29e-1134
ecto-epithelium7.37e-1173
brain grey matter1.13e-0929
regional part of telencephalon1.13e-0929
telencephalon1.13e-0929
neurectoderm2.91e-0964
neural plate2.91e-0964
presumptive neural plate2.91e-0964
cerebral cortex8.24e-0921
cerebral hemisphere8.24e-0921
pallium8.24e-0921
regional part of nervous system1.22e-0854
neural tube4.71e-0852
neural rod4.71e-0852
future spinal cord4.71e-0852
neural keel4.71e-0852
central nervous system6.72e-0873
nervous system6.90e-0875
pre-chordal neural plate1.53e-0749
brain2.22e-0747
future brain2.22e-0747
regional part of brain2.93e-0746
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