FFCP PHASE1:Hg19::chrX:72783313..72783335,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=53344 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1934 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=25bp_to_ENST00000498318_5end | |||
|cluster_id=chrX:72783313..72783335,+ | |||
|description=CAGE_peak_4_at_CHIC1_5end | |||
|id=chrX:72783313..72783335,+ | |||
|ontology_enrichment_celltype=CL:0000838!5.03e-09!52;CL:0000542!1.38e-08!53;CL:0000051!1.38e-08!53 | |||
|ontology_enrichment_celltype_v019=CL:0000236;3.10e-16;13!CL:0000945;6.40e-11;24!CL:0000542;1.87e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,2.74e-15,14;CL:0000838,7.97e-12,52;CL:0000542,1.51e-11,53;CL:0000051,1.51e-11,53;CL:0000945,4.21e-11,24;CL:0000826,4.21e-11,24 | |||
|ontology_enrichment_development_v019=CL:0000051;1.87e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.06e-15!115;UBERON:0000955!1.06e-08!69;UBERON:0006238!1.06e-08!69;UBERON:0001049!2.43e-08!57;UBERON:0005068!2.43e-08!57;UBERON:0006241!2.43e-08!57;UBERON:0007135!2.43e-08!57;UBERON:0001017!2.68e-08!82;UBERON:0005743!1.45e-07!86;UBERON:0002780!1.92e-07!41;UBERON:0001890!1.92e-07!41;UBERON:0006240!1.92e-07!41;UBERON:0003080!5.20e-07!42;UBERON:0002616!5.50e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.90e-08;32!UBERON:0000349;2.02e-08;5!UBERON:0002619;2.18e-08;22!UBERON:0001893;1.13e-07;34!UBERON:0000956;2.59e-07;25!UBERON:0000203;2.59e-07;25!UBERON:0003528;2.68e-07;34!UBERON:0002020;2.68e-07;34!UBERON:0002791;3.62e-07;32!UBERON:0001950;6.49e-07;20!UBERON:0000988;9.54e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,2.79e-09,32;UBERON:0000349,1.14e-08,5;UBERON:0001893,1.16e-08,34;UBERON:0003528,1.46e-08,34;UBERON:0002020,1.46e-08,34;UBERON:0002619,1.80e-08,22;UBERON:0000955,6.62e-08,68;UBERON:0006238,6.62e-08,68;UBERON:0000073,1.10e-07,53;UBERON:0002616,1.10e-07,53;UBERON:0000956,2.19e-07,25;UBERON:0000203,2.19e-07,25;UBERON:0001017,2.40e-07,81;UBERON:0002791,2.88e-07,32;UBERON:0001049,3.58e-07,56;UBERON:0005068,3.58e-07,56;UBERON:0006241,3.58e-07,56;UBERON:0007135,3.58e-07,56;UBERON:0002780,5.81e-07,41;UBERON:0001890,5.81e-07,41;UBERON:0003080,5.81e-07,41;UBERON:0006240,5.81e-07,41;UBERON:0001950,5.97e-07,20;UBERON:0000988,9.33e-07,3 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.422863212287913,0,0,0,0,0.631719873426831,0.261185628199839,0,0,0.436882744260345,0,0.123766352960047,0.662794751455832,1.34465029290355,0,0,0.487932798790507,0,0,0,0,0,0,0.0764134057479513,0,0.157421562627358,0,0.767658796194425,0.154816123316076,0,0,0,0.92960640696362,0.142169232487422,0,0.553995408531877,0.401088894940283,0.217010870715852,0.447830948479849,0,0.77272670290256,0.290796477559129,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0.306083892370903,0.320929027076094,0.639337125799041,0,0.199463657621632,0,0,0,0,0.251248665256743,0,0,0,0,0.316462387440884,0,0.212604299965044,0.209658645508376,0.22465726229299,0,0.16072558669708,0.570025487482497,0.59675003159727,0.365328307529268,0,2.18455444504853,0,0.426730222566507,2.00197993518006,2.29900975981793,1.32208974556972,1.90810750907073,1.70763890732835,0,1.52909291250092,1.32171328579026,0.560508562981536,0.263384084775077,0.393419540227666,0,0.411202997999018,0.501559486172034,0.32592226663359,1.89379122293893,0,1.00269411196656,1.17842362989935,1.10766947291811,1.35401931882508,1.15282187753108,0.780356085359269,0.493313713811028,0.276350017785848,0,0.14828656316206,1.33770414044857,0,0.339928028092699,0.383220493601921,1.03088233644789,0.506039384039006,1.59282707162048,0.651083453856419,0,1.05402583354441,0.895906278080929,2.49861453104692,0.710331756132051,0,0.80642697289893,0,0.434473211648397,0,0,0.12786256184353,0.361439152384566,0,0.434539556882471,0,0,0.472674085820339,0,0.175669571386252,0.261958150995425,0,0,0,0,0,0.476981248610684,0.571994910780128,0.371457501329565,0.198762407366705,0,0,0,0,0,0,0.516833518338658,0.35576626268671,0,0,0.760272105718513,0,0,0.81014194788176,0.446498641420399,0,0,0,0,0.366403487860815,0,0,0,0,0.25326102332916,0.529636723252875,0.860509862246441,0.709336764396714,0,0,0.24666754841716,0,0.134710672069688,0,0.302714855289863,0,0.234321431833797,0,0,0.597794722207204,0.23486899728753,0,0,0,0.245668634623536,0.103325781175765,0,0,0,0,0.168336113954066,0.250237039743928,0,0,0,0,0.113432183160021,0.179389635688862,0,0.211931901159562,0,0.309157587715317,0,0.37223371266318,0.168776332241266,0.584622030967192,0.252433774244115,0.0920498986422993,0.646584227275248,0,0.10075209822764,0,0.193260853163297,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0.464367928031979,0,0,0,0.241011029883482,0.220587945464788,0,0,0,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0.882926198829301,0.122988438543114,0,0,0,0.201057944823262,0,0,0,0,0,0.117408694235822,0.144366447761074,0,0.190254152234598,0.790204397959275,0,0,0,0,0,0.335964256397719,0.283550194484773,0.179117045405697,0.290633938513962,0,0.985326475791887,1.05658120815871,0.829312462163088,0.720599767084807,0.75745460055828,0.253991577168676,0,0,0,0,0,0,0.112131084345361,0,0.36669142910475,0,0,0,0,0,0.257207374262142,0,0,0.285955987316295,0,0,0,0.355391948742546,0,0.301439377059586,0,0.499864955910285,0,0,0,0.239624855491583,0,0,0.723906533337896,0.410952645100767,0.895304816199478,0,0.591092280605782,0.646882724578552,0.513372145118994,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0.178428988797162,0,0,0,0,0,0,0,0.521301686808497,0,0,0.620304078368662,0.431428401637234,0.640365346820666,0,0,0,0.248107807818777,0.153461973288062,0,0,0,0.160853921143607,0,0.154209693802656,0,0.164254312027618,0,0,0.120859449591622,0.601519410909855,0.0920809889358963,0.114814448164607,0,0.262248829918848,0,0.0770153371044148,0,0,0,1.13733384070897,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0.640986253728404,0.660075999364704,0,0,0,0,0.308097234229289,0.15350367472613,0,0.537101224341368,0.290033387828457,0.170453254832202,0,0,0,0.893288987462089,0,0,0,0,0,0,0,0,0.286249773483982,0.372158369359667,0,0.190630193923825,0.255897791311334,0,0,0,0.359744915166629,0.274537029736055,0.117812402345686,0,0,0.421258456238981,0,0.243713489631284,0,0.272999822815972,0.282810863907425,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,1.41904425628239,0.211107635297664,0.658589785919804,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0.764637207142375,2.27858874869665,0.238231775457789,0.822724546172388,0,1.62009431171434,0.79312517629427,0.106824071127473,0,0,0,0,0.426851060090485,0.478278818186467,0,0.191505370132367,0,0,0.842391534340376,0,0,0,0,0,0,0,0.343505344755765,0.614481528616916,0,0.166849141711909,0.19538809540204,0,0,0.270455678475983,0.33307196799782,0,0,0.586032717087576,0,0,0,0.71623345421307,0,0.307160702099232,1.9882952955326,0.844016498463076,0.111308705022906,0,0.211125408127993,0.19924798825107,0.828851746593443,0,0.409074730008619,0.369254416383208,0,0.0898683511473268,0,0,0.493217028184668,0,0,0.969332746095218,0.927680981618513,1.99613798001194,0.520855522170466,0,0,0.227586896570999,0,0,0,0,0,0,0.60298219312704,0,0.331737779793674,0.295547618953547,1.09692698576986,0,0.278847488557207,0.538651809526579,0,0,0,0.108647371922008,0.31900115973192,0,0,1.02193298195737,0.31396051279005,0.166211681900156,0,0,0,0,0,0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| |||
|short_description=p4@CHIC1 | |||
}} |
Latest revision as of 08:48, 16 September 2015
Short description: | p4@CHIC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CHIC1_5end |
Coexpression cluster: | NA |
Association with transcript: | 25bp_to_ENST00000498318_5end |
EntrezGene: | CHIC1 |
HGNC: | 1934 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 2.74e-15 | 14 |
lymphoid lineage restricted progenitor cell | 7.97e-12 | 52 |
lymphocyte | 1.51e-11 | 53 |
common lymphoid progenitor | 1.51e-11 | 53 |
lymphocyte of B lineage | 4.21e-11 | 24 |
pro-B cell | 4.21e-11 | 24 |
Ontology term | p-value | n |
---|---|---|
cerebral hemisphere | 2.79e-09 | 32 |
limbic system | 1.14e-08 | 5 |
telencephalon | 1.16e-08 | 34 |
brain grey matter | 1.46e-08 | 34 |
gray matter | 1.46e-08 | 34 |
regional part of cerebral cortex | 1.80e-08 | 22 |
brain | 6.62e-08 | 68 |
future brain | 6.62e-08 | 68 |
regional part of nervous system | 1.10e-07 | 53 |
regional part of brain | 1.10e-07 | 53 |
cerebral cortex | 2.19e-07 | 25 |
pallium | 2.19e-07 | 25 |
central nervous system | 2.40e-07 | 81 |
regional part of telencephalon | 2.88e-07 | 32 |
neural tube | 3.58e-07 | 56 |
neural rod | 3.58e-07 | 56 |
future spinal cord | 3.58e-07 | 56 |
neural keel | 3.58e-07 | 56 |
regional part of forebrain | 5.81e-07 | 41 |
forebrain | 5.81e-07 | 41 |
anterior neural tube | 5.81e-07 | 41 |
future forebrain | 5.81e-07 | 41 |
neocortex | 5.97e-07 | 20 |
pons | 9.33e-07 | 3 |