FFCP PHASE1:Mm9::chr7:20282961..20282984,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=200|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:20282961..20282984,-|id=chr7:20282961..20282984,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002319,3.82e-09,43;CL:0000221,8.76e-09,44;CL:0000133,8.76e-09,44;CL:0002453,1.68e-08,8;CL:0000182,2.67e-07,5;CL:0002321,3.04e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!5.98e-12!22;UBERON:0007499!5.98e-12!22;UBERON:0006925!5.98e-12!22;UBERON:0009497!5.98e-12!22;UBERON:0000015!5.98e-12!22;UBERON:0002423!5.98e-12!22;UBERON:0006235!5.98e-12!22;UBERON:0008835!5.98e-12!22;UBERON:0003894!5.98e-12!22;UBERON:0004161!5.98e-12!22;UBERON:0008836!5.98e-12!22;UBERON:0002365!1.07e-11!25;UBERON:0002330!1.07e-11!25;UBERON:0000025!1.51e-11!114;UBERON:0004111!6.54e-11!122;UBERON:0009854!8.33e-11!23;UBERON:0009856!8.33e-11!23;UBERON:0004121!1.20e-10!102;UBERON:0000924!1.20e-10!102;UBERON:0006601!1.20e-10!102;UBERON:0001017!5.32e-10!73;UBERON:0005743!5.32e-10!73;UBERON:0000073!1.89e-09!75;UBERON:0001016!1.89e-09!75;UBERON:0005172!1.94e-07!49;UBERON:0005173!1.94e-07!49;UBERON:0002417!1.94e-07!49;UBERON:0000916!1.94e-07!49;UBERON:0001049!5.31e-07!52;UBERON:0005068!5.31e-07!52;UBERON:0006241!5.31e-07!52;UBERON:0007135!5.31e-07!52;UBERON:0000477!9.78e-07!154|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.44e-17,22;UBERON:0007499,1.44e-17,22;UBERON:0006925,1.44e-17,22;UBERON:0009497,1.44e-17,22;UBERON:0000015,1.44e-17,22;UBERON:0002423,1.44e-17,22;UBERON:0006235,1.44e-17,22;UBERON:0008835,1.44e-17,22;UBERON:0003894,1.44e-17,22;UBERON:0004161,1.44e-17,22;UBERON:0008836,1.44e-17,22;UBERON:0009854,1.62e-16,23;UBERON:0009856,1.62e-16,23;UBERON:0002365,1.12e-14,25;UBERON:0002330,1.12e-14,25;UBERON:0001017,5.50e-13,73;UBERON:0001016,2.43e-12,75;UBERON:0000025,3.23e-12,114;UBERON:0004111,1.67e-10,122;UBERON:0002021,2.67e-10,10;UBERON:0000411,2.67e-10,10;UBERON:0001950,2.67e-10,10;UBERON:0004121,4.77e-10,95;UBERON:0000924,4.77e-10,95;UBERON:0006601,4.77e-10,95;UBERON:0000073,5.16e-10,54;UBERON:0002020,5.23e-09,34;UBERON:0002619,1.09e-08,17;UBERON:0001049,6.11e-08,52;UBERON:0005068,6.11e-08,52;UBERON:0006241,6.11e-08,52;UBERON:0007135,6.11e-08,52;UBERON:0003914,6.17e-08,47;UBERON:0005256,4.31e-07,45|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,2.09868563438444,0.473193248037357,0.137114433605739,0.42438965179803,1.27564935226605,0,0,1.11994695955385,1.14704640533585,0,0,0,0.190023419456374,0.252030129759931,0,0.635030673459631,0,0,0,0,0,0,0,0,0.588231488031014,0.683045484958446,0,0,0,0,6.25913075478431,3.05235218932625,3.07560655828261,3.88859798148567,2.2397827460058,1.43752564364972,0.335565212115473,0,0,0.514518872071894,0.286533439938757,3.6097046459421,0,0,0,0.338844532069132,0,107.538016215127,148.329954385046,104.440576897077,42.5432156936135,55.3274359663039,0.103689612308478,0.270011876663381,0,7.7125765789027,9.49734726091938,0.122490799214954,0,0,3.30347642998166,3.31987079021488,3.5329502648936,0.131886287730194,0.182975287204819,0,5.862842979029,15.1945904708554,9.32069311438542,3.83017161115768,4.8406371471695,0.372798891650601,0.075726193333184,0.0755715601067855,3.47837386442013,68.8339101585109,40.1183086887573,87.4319170453264,110.461990966104,79.7487859033257,5.33688796500657,0,0,0,0.704217098883403,0,0,0,0,0,0,9.02052649780574,1.8125651855302,0.593768556259299,0.173485326766136,0.913396434936424,0.230615497256059,0.753613202763113,0.352766121407114,0.376999773989026,2.71914464507811,1.73519228303894,1.76922110389975,0.161766849947409,0.441683036920787,0,0,0.878342391034642,0.83778682725382,0,0.359445373517761,0.599902730993408,0,0.898743836428936,0,0.125654352112864,0.521472960576829,0.767146371990992,2.28566849015516,1.1356888414743,0.712875546952214,0.124406970610093,1.76905930903572,0,0,0.459804208866946,0.180062129805349,0.452114453507145,0.272145996605311,0.12811372028485,0.374806898238915,1.03481348295606,0,0,0,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0.207125772535502,0,0.540186184383045,0.23674473558521,0.196764231747404,0.154267112887378,0,0.536546802799238,0.116765342367169,0,0.164167464079095,0.324275238183423,1.02339991197733,0.219550115291051,0.134206418760372,1.26173969138476,0.617427674275707,0,0,0,0,0,0,0.22237804384487,0.190225626112559,0.474529061544512,0.658795818896044,0,0.198956472041151,0.19496408711912,0,0,0.398282546508734,0,0.228497025219458,1.1270773567308,0,0,0.0701358198903186,0.442655759869801,0.885660887877613,0.470996183524124,0,13.3403682189217,0.166845105716094,0.589676985339609,0.899448449539415,1.21716072833102,1.4470629585145,2.03700681425136,5.4662266115654,8.91743747262695,11.5315793538994,145.205888592628,20.4677521217677,19.6583734062173,13.639259409144,13.8136008411872,19.7801843758981,0.369506380333209,0,0,0.169745085775188,0.234690248288502,0,0.476087281772027,0.585400943573396,0.157635144106191,0,0,0.491589944147214,0.518054945597687,0.578596234326046,19.6028669121054,3.26343410291226,0.491764273019036,0.275936746304732,1.12385412991454,1.05490517932983,0,0.252470927204373,0.315508219416257,0,0.646270193198397,1.91175038362042,1.78238939265915,1.69845918473299,2.02405350837447,2.33804686329049,2.37172666767914,0.963963949265421,0.283880170416537,0.35613120733451,0.162886959353576,0.494910368917606,0,0.242780636154981,0,0,0,0,0,0.727067458955011,1.06949213515416,0.632073515871632,0,1.03135543248187,0.680879211507576,0,0.388076051348264,0.214337035031592,0,0.178368817602071,0.164549020602121,0.913394847343798,0.23467170806371,0,0,2.14352128823924,0.161464426695906,0.422190474497091,0.596861720015682,1.47726809770555,0.291480836629851,0.927126510052548,0.512612642393558,0.206386867963223,0.185194527369712,0.565105371014073,0.410082683163076,0.228778173206523,0,0,0.138199973804424,0,0,0,0.432021363287205,0.209088296014469,0.218362563746178,0,0.991841468704031,0.26175594198403,0.259229946583586,0.621339313086926,0,0,0.165458490457098,0,0.387479470433193,0,0.117357238645754,0.13020438484395,0,0,0,0,0,0,0.25984164595559,0,0.198681354781265,0.120195449519969,0.147689527174577,0.201932899896295,0,0.100826185136841,0.292373642219257,0.384847366561318,0.233753804363138,0.226730383615211,0,0,0,0.386379188064381,0.187682475451182,0,0.214368379079066,0,3.3885110557024,3.68260189205742,4.01026859407578,3.09335728218638,6.16574267793578,6.0431511791176,4.72515750162264,2.70192721934532,4.98456649882625,3.62432218226274,0,0,0,0.243106717068294,0.209613162627982,0.183843508450014,0.44449345560323,0.412070114477788,0.320919209591815,0.505394423527595,0.50695859978048,0.188626341386076,0.468207537349412,0.448176066834085,0.229741875822453,0,0.347652977834566,0.38581844092741,0.412085900803307,0.294397840268795,0.342869252385415,0.532427418478012,0,0.581385666529314,0.470546902076653,0.169229215783353,0.182927972872773,0,0.407412341537585,1.12228454331548,0.355905054372522,0.492522411877817,1.22769312950907,0.309873682371932,0.385813221962283,0,0.935726433781634,1.50409737833809,0.191288332068843,0.441182838239031,0|short_description=p@chr7:20282961..20282984,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=200 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:20282961..20282984,- | |||
|description=CAGE_peak_at_chr7:20282961..20282984,- | |||
|id=chr7:20282961..20282984,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,3.82e-09,43;CL:0000221,8.76e-09,44;CL:0000133,8.76e-09,44;CL:0002453,1.68e-08,8;CL:0000182,2.67e-07,5;CL:0002321,3.04e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!5.98e-12!22;UBERON:0007499!5.98e-12!22;UBERON:0006925!5.98e-12!22;UBERON:0009497!5.98e-12!22;UBERON:0000015!5.98e-12!22;UBERON:0002423!5.98e-12!22;UBERON:0006235!5.98e-12!22;UBERON:0008835!5.98e-12!22;UBERON:0003894!5.98e-12!22;UBERON:0004161!5.98e-12!22;UBERON:0008836!5.98e-12!22;UBERON:0002365!1.07e-11!25;UBERON:0002330!1.07e-11!25;UBERON:0000025!1.51e-11!114;UBERON:0004111!6.54e-11!122;UBERON:0009854!8.33e-11!23;UBERON:0009856!8.33e-11!23;UBERON:0004121!1.20e-10!102;UBERON:0000924!1.20e-10!102;UBERON:0006601!1.20e-10!102;UBERON:0001017!5.32e-10!73;UBERON:0005743!5.32e-10!73;UBERON:0000073!1.89e-09!75;UBERON:0001016!1.89e-09!75;UBERON:0005172!1.94e-07!49;UBERON:0005173!1.94e-07!49;UBERON:0002417!1.94e-07!49;UBERON:0000916!1.94e-07!49;UBERON:0001049!5.31e-07!52;UBERON:0005068!5.31e-07!52;UBERON:0006241!5.31e-07!52;UBERON:0007135!5.31e-07!52;UBERON:0000477!9.78e-07!154 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.44e-17,22;UBERON:0007499,1.44e-17,22;UBERON:0006925,1.44e-17,22;UBERON:0009497,1.44e-17,22;UBERON:0000015,1.44e-17,22;UBERON:0002423,1.44e-17,22;UBERON:0006235,1.44e-17,22;UBERON:0008835,1.44e-17,22;UBERON:0003894,1.44e-17,22;UBERON:0004161,1.44e-17,22;UBERON:0008836,1.44e-17,22;UBERON:0009854,1.62e-16,23;UBERON:0009856,1.62e-16,23;UBERON:0002365,1.12e-14,25;UBERON:0002330,1.12e-14,25;UBERON:0001017,5.50e-13,73;UBERON:0001016,2.43e-12,75;UBERON:0000025,3.23e-12,114;UBERON:0004111,1.67e-10,122;UBERON:0002021,2.67e-10,10;UBERON:0000411,2.67e-10,10;UBERON:0001950,2.67e-10,10;UBERON:0004121,4.77e-10,95;UBERON:0000924,4.77e-10,95;UBERON:0006601,4.77e-10,95;UBERON:0000073,5.16e-10,54;UBERON:0002020,5.23e-09,34;UBERON:0002619,1.09e-08,17;UBERON:0001049,6.11e-08,52;UBERON:0005068,6.11e-08,52;UBERON:0006241,6.11e-08,52;UBERON:0007135,6.11e-08,52;UBERON:0003914,6.17e-08,47;UBERON:0005256,4.31e-07,45 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,2.09868563438444,0.473193248037357,0.137114433605739,0.42438965179803,1.27564935226605,0,0,1.11994695955385,1.14704640533585,0,0,0,0.190023419456374,0.252030129759931,0,0.635030673459631,0,0,0,0,0,0,0,0,0.588231488031014,0.683045484958446,0,0,0,0,6.25913075478431,3.05235218932625,3.07560655828261,3.88859798148567,2.2397827460058,1.43752564364972,0.335565212115473,0,0,0.514518872071894,0.286533439938757,3.6097046459421,0,0,0,0.338844532069132,0,107.538016215127,148.329954385046,104.440576897077,42.5432156936135,55.3274359663039,0.103689612308478,0.270011876663381,0,7.7125765789027,9.49734726091938,0.122490799214954,0,0,3.30347642998166,3.31987079021488,3.5329502648936,0.131886287730194,0.182975287204819,0,5.862842979029,15.1945904708554,9.32069311438542,3.83017161115768,4.8406371471695,0.372798891650601,0.075726193333184,0.0755715601067855,3.47837386442013,68.8339101585109,40.1183086887573,87.4319170453264,110.461990966104,79.7487859033257,5.33688796500657,0,0,0,0.704217098883403,0,0,0,0,0,0,9.02052649780574,1.8125651855302,0.593768556259299,0.173485326766136,0.913396434936424,0.230615497256059,0.753613202763113,0.352766121407114,0.376999773989026,2.71914464507811,1.73519228303894,1.76922110389975,0.161766849947409,0.441683036920787,0,0,0.878342391034642,0.83778682725382,0,0.359445373517761,0.599902730993408,0,0.898743836428936,0,0.125654352112864,0.521472960576829,0.767146371990992,2.28566849015516,1.1356888414743,0.712875546952214,0.124406970610093,1.76905930903572,0,0,0.459804208866946,0.180062129805349,0.452114453507145,0.272145996605311,0.12811372028485,0.374806898238915,1.03481348295606,0,0,0,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0.207125772535502,0,0.540186184383045,0.23674473558521,0.196764231747404,0.154267112887378,0,0.536546802799238,0.116765342367169,0,0.164167464079095,0.324275238183423,1.02339991197733,0.219550115291051,0.134206418760372,1.26173969138476,0.617427674275707,0,0,0,0,0,0,0.22237804384487,0.190225626112559,0.474529061544512,0.658795818896044,0,0.198956472041151,0.19496408711912,0,0,0.398282546508734,0,0.228497025219458,1.1270773567308,0,0,0.0701358198903186,0.442655759869801,0.885660887877613,0.470996183524124,0,13.3403682189217,0.166845105716094,0.589676985339609,0.899448449539415,1.21716072833102,1.4470629585145,2.03700681425136,5.4662266115654,8.91743747262695,11.5315793538994,145.205888592628,20.4677521217677,19.6583734062173,13.639259409144,13.8136008411872,19.7801843758981,0.369506380333209,0,0,0.169745085775188,0.234690248288502,0,0.476087281772027,0.585400943573396,0.157635144106191,0,0,0.491589944147214,0.518054945597687,0.578596234326046,19.6028669121054,3.26343410291226,0.491764273019036,0.275936746304732,1.12385412991454,1.05490517932983,0,0.252470927204373,0.315508219416257,0,0.646270193198397,1.91175038362042,1.78238939265915,1.69845918473299,2.02405350837447,2.33804686329049,2.37172666767914,0.963963949265421,0.283880170416537,0.35613120733451,0.162886959353576,0.494910368917606,0,0.242780636154981,0,0,0,0,0,0.727067458955011,1.06949213515416,0.632073515871632,0,1.03135543248187,0.680879211507576,0,0.388076051348264,0.214337035031592,0,0.178368817602071,0.164549020602121,0.913394847343798,0.23467170806371,0,0,2.14352128823924,0.161464426695906,0.422190474497091,0.596861720015682,1.47726809770555,0.291480836629851,0.927126510052548,0.512612642393558,0.206386867963223,0.185194527369712,0.565105371014073,0.410082683163076,0.228778173206523,0,0,0.138199973804424,0,0,0,0.432021363287205,0.209088296014469,0.218362563746178,0,0.991841468704031,0.26175594198403,0.259229946583586,0.621339313086926,0,0,0.165458490457098,0,0.387479470433193,0,0.117357238645754,0.13020438484395,0,0,0,0,0,0,0.25984164595559,0,0.198681354781265,0.120195449519969,0.147689527174577,0.201932899896295,0,0.100826185136841,0.292373642219257,0.384847366561318,0.233753804363138,0.226730383615211,0,0,0,0.386379188064381,0.187682475451182,0,0.214368379079066,0,3.3885110557024,3.68260189205742,4.01026859407578,3.09335728218638,6.16574267793578,6.0431511791176,4.72515750162264,2.70192721934532,4.98456649882625,3.62432218226274,0,0,0,0.243106717068294,0.209613162627982,0.183843508450014,0.44449345560323,0.412070114477788,0.320919209591815,0.505394423527595,0.50695859978048,0.188626341386076,0.468207537349412,0.448176066834085,0.229741875822453,0,0.347652977834566,0.38581844092741,0.412085900803307,0.294397840268795,0.342869252385415,0.532427418478012,0,0.581385666529314,0.470546902076653,0.169229215783353,0.182927972872773,0,0.407412341537585,1.12228454331548,0.355905054372522,0.492522411877817,1.22769312950907,0.309873682371932,0.385813221962283,0,0.935726433781634,1.50409737833809,0.191288332068843,0.441182838239031,0 | |||
|short_description=p@chr7:20282961..20282984,- | |||
}} |
Latest revision as of 18:29, 4 August 2015
Short description: | p@chr7:20282961..20282984, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:20282961..20282984, - |
Coexpression cluster: | MCL_coexpression_mm9:200 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 3.82e-09 | 43 |
ectodermal cell | 8.76e-09 | 44 |
neurectodermal cell | 8.76e-09 | 44 |
oligodendrocyte precursor cell | 1.68e-08 | 8 |
hepatocyte | 2.67e-07 | 5 |
embryonic cell | 3.04e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
liver | 1.44e-17 | 22 |
epithelial sac | 1.44e-17 | 22 |
digestive gland | 1.44e-17 | 22 |
epithelium of foregut-midgut junction | 1.44e-17 | 22 |
anatomical boundary | 1.44e-17 | 22 |
hepatobiliary system | 1.44e-17 | 22 |
foregut-midgut junction | 1.44e-17 | 22 |
hepatic diverticulum | 1.44e-17 | 22 |
liver primordium | 1.44e-17 | 22 |
septum transversum | 1.44e-17 | 22 |
liver bud | 1.44e-17 | 22 |
digestive tract diverticulum | 1.62e-16 | 23 |
sac | 1.62e-16 | 23 |
exocrine gland | 1.12e-14 | 25 |
exocrine system | 1.12e-14 | 25 |
central nervous system | 5.50e-13 | 73 |
nervous system | 2.43e-12 | 75 |
tube | 3.23e-12 | 114 |
anatomical conduit | 1.67e-10 | 122 |
occipital lobe | 2.67e-10 | 10 |
visual cortex | 2.67e-10 | 10 |
neocortex | 2.67e-10 | 10 |
ectoderm-derived structure | 4.77e-10 | 95 |
ectoderm | 4.77e-10 | 95 |
presumptive ectoderm | 4.77e-10 | 95 |
regional part of nervous system | 5.16e-10 | 54 |
gray matter | 5.23e-09 | 34 |
regional part of cerebral cortex | 1.09e-08 | 17 |
neural tube | 6.11e-08 | 52 |
neural rod | 6.11e-08 | 52 |
future spinal cord | 6.11e-08 | 52 |
neural keel | 6.11e-08 | 52 |
epithelial tube | 6.17e-08 | 47 |
trunk mesenchyme | 4.31e-07 | 45 |