FFCP PHASE1:Mm9::chr8:109192512..109192529,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=3651|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr8:109192512..109192529,+|id=chr8:109192512..109192529,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000068,2.15e-08,3;CL:0002202,2.15e-08,3;CL:0000069,2.15e-08,3;CL:0002632,2.15e-08,3;CL:0002368,2.15e-08,3;CL:0000307,2.15e-08,3;CL:0000377,2.15e-08,3;CL:0000066,3.54e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!3.43e-20!130;UBERON:0000925!3.43e-20!130;UBERON:0006595!3.43e-20!130;UBERON:0001007!1.21e-19!128;UBERON:0001555!1.21e-19!128;UBERON:0007026!1.21e-19!128;UBERON:0005409!1.54e-19!59;UBERON:0000160!3.19e-18!43;UBERON:0004921!3.28e-18!126;UBERON:0004185!3.28e-18!126;UBERON:0002108!5.24e-12!16;UBERON:0001045!9.77e-10!13;UBERON:0001264!5.23e-09!12;UBERON:0003922!5.23e-09!12;UBERON:0002114!5.23e-09!12;UBERON:0003923!5.23e-09!12;UBERON:0003924!5.23e-09!12;UBERON:0003921!5.23e-09!12;UBERON:0000077!1.43e-08!97;UBERON:0000344!2.39e-08!15;UBERON:0001041!1.46e-07!92;UBERON:0000466!4.67e-07!79;UBERON:0001242!8.36e-07!13;UBERON:0000060!8.36e-07!13;UBERON:0001262!8.36e-07!13;UBERON:0004786!8.36e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0001264,2.72e-15,12;UBERON:0000160,2.11e-12,31;UBERON:0005409,6.56e-12,47;UBERON:0002108,2.98e-09,4;UBERON:0002075,6.28e-09,19;UBERON:0003126,2.15e-08,3;UBERON:0001005,2.15e-08,3;UBERON:0007196,2.15e-08,3;UBERON:0001558,2.15e-08,3;UBERON:0000344,4.90e-08,15;UBERON:0000331,3.75e-07,3;UBERON:0002116,3.75e-07,3;UBERON:0001204,3.75e-07,3;UBERON:0001168,3.75e-07,3;UBERON:0001007,8.10e-07,116;UBERON:0001555,8.10e-07,116;UBERON:0007026,8.10e-07,116|phase1_expression=2.08193501236232,0,0.909998478779072,0.60492842261366,0.500895729946347,0.33575854382378,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0.0992909512008853,0,2.55987876469451,4.12936705920906,1.72269589234506,1.7230479846363,0.646413698057667,2.85035129184561,1.51218077855958,1.33038306393183,0,0,0,0.577703239502549,1.66234645358492,1.22501613757421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0.220868540951614,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0.142371680799103,0,0.075726193333184,0,0.579728977403356,0.860423876981386,0,0,1.94932925234301,0,0.421333260395256,0,0,0,2.53518155598025,0,0,0,6.71122227134764,6.84071636782766,7.07734223020697,1.37020655662872,0,0,0,0,0,0,0,0,0.988779870937496,0,0,0,0,0,1.86391761218122,0,0,2.04365644166873,0,0,0,0,0,0,0,0,0,0,0,0,0.758168275301024,0,0,0,0,0.30140963567143,0,0.12811372028485,0,0,0,0,0.175951124163949,0,0,0.348252166522167,0.411564272815887,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32167513193519,0,0,0,0,0.201683524623343,0,0.570676878337677,2.84717436926707,1.31759163779209,2.26201687920243,1.1937388322469,0.779856348476481,0.898819408654221,2.59365659849633,2.38969527905241,0,0.228497025219458,0,0.610953983535943,0,0.280543279561274,0.316182685621286,0.147610147979602,0.156998727841375,0.246794327843601,0,0,0,0,0,0.241177159752417,0,0.575392274901621,0.972811360650212,0.823684239564244,2.87536413054709,0.744281895337007,0.312037673114561,0.505157755894224,0.358794827043824,0,0.184753190166605,0,0.162964976442026,0.678980343100753,0.469380496577004,0,0,0.975668239288994,0.157635144106191,0,0.637819074629948,0.327726629431476,0.345369963731791,0.723245292907558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0,0,1.32745138339963,1.21390318077491,0.906970670894253,1.50884063804718,0.590603785761546,1.84461088766356,1.03371317267288,1.81766864738753,1.06949213515416,1.26414703174326,4.21674434299995,2.06271086496374,0,0,0.517434735131018,0,0.177340233642274,0.178368817602071,0,0,0.23467170806371,0.21183207086382,0.661585194164886,0.8244312647074,0.322928853391811,0.241251699712623,1.07435109602823,0,2.62332752966866,0,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,1.90934123603023,0.158167996790568,0.203319467126849,0.648032044930808,0.209088296014469,1.09181281873089,0.134864346384821,0.826534557253359,1.30877970992015,1.29614973291793,0.621339313086926,0,0,0,0,0.129159823477731,0,0.117357238645754,0,0,0,0,0,0.810900861160657,0.410843828659309,0.389762468933385,0,0,0,0,0,0,0.100826185136841,0.0974578807397524,0,0,0.226730383615211,0.221985953374065,0.717710852875806,0.503653849092235,0.19318959403219,0.187682475451182,0.183151624267265,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0.377252682772152,0.187283014939765,0.0640251524048693,0.229741875822453,0,0.231768651889711,0,0.412085900803307,0.147198920134397,1.02860775715625,0.887379030796687,0,0.436039249896986,0.0941093804153306,0.169229215783353,0.182927972872773,0.263069711437843,0.407412341537585,0.561142271657738,0.711810108745045,0.197008964751127,0.409231043169689,0.309873682371932,0.385813221962283,0,0,0,0,0,0|short_description=p@chr8:109192512..109192529,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=3651 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr8:109192512..109192529,+ | |||
|description=CAGE_peak_at_chr8:109192512..109192529,+ | |||
|id=chr8:109192512..109192529,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,2.15e-08,3;CL:0002202,2.15e-08,3;CL:0000069,2.15e-08,3;CL:0002632,2.15e-08,3;CL:0002368,2.15e-08,3;CL:0000307,2.15e-08,3;CL:0000377,2.15e-08,3;CL:0000066,3.54e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!3.43e-20!130;UBERON:0000925!3.43e-20!130;UBERON:0006595!3.43e-20!130;UBERON:0001007!1.21e-19!128;UBERON:0001555!1.21e-19!128;UBERON:0007026!1.21e-19!128;UBERON:0005409!1.54e-19!59;UBERON:0000160!3.19e-18!43;UBERON:0004921!3.28e-18!126;UBERON:0004185!3.28e-18!126;UBERON:0002108!5.24e-12!16;UBERON:0001045!9.77e-10!13;UBERON:0001264!5.23e-09!12;UBERON:0003922!5.23e-09!12;UBERON:0002114!5.23e-09!12;UBERON:0003923!5.23e-09!12;UBERON:0003924!5.23e-09!12;UBERON:0003921!5.23e-09!12;UBERON:0000077!1.43e-08!97;UBERON:0000344!2.39e-08!15;UBERON:0001041!1.46e-07!92;UBERON:0000466!4.67e-07!79;UBERON:0001242!8.36e-07!13;UBERON:0000060!8.36e-07!13;UBERON:0001262!8.36e-07!13;UBERON:0004786!8.36e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001264,2.72e-15,12;UBERON:0000160,2.11e-12,31;UBERON:0005409,6.56e-12,47;UBERON:0002108,2.98e-09,4;UBERON:0002075,6.28e-09,19;UBERON:0003126,2.15e-08,3;UBERON:0001005,2.15e-08,3;UBERON:0007196,2.15e-08,3;UBERON:0001558,2.15e-08,3;UBERON:0000344,4.90e-08,15;UBERON:0000331,3.75e-07,3;UBERON:0002116,3.75e-07,3;UBERON:0001204,3.75e-07,3;UBERON:0001168,3.75e-07,3;UBERON:0001007,8.10e-07,116;UBERON:0001555,8.10e-07,116;UBERON:0007026,8.10e-07,116 | |||
|phase1_expression=2.08193501236232,0,0.909998478779072,0.60492842261366,0.500895729946347,0.33575854382378,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0.0992909512008853,0,2.55987876469451,4.12936705920906,1.72269589234506,1.7230479846363,0.646413698057667,2.85035129184561,1.51218077855958,1.33038306393183,0,0,0,0.577703239502549,1.66234645358492,1.22501613757421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0.220868540951614,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0.142371680799103,0,0.075726193333184,0,0.579728977403356,0.860423876981386,0,0,1.94932925234301,0,0.421333260395256,0,0,0,2.53518155598025,0,0,0,6.71122227134764,6.84071636782766,7.07734223020697,1.37020655662872,0,0,0,0,0,0,0,0,0.988779870937496,0,0,0,0,0,1.86391761218122,0,0,2.04365644166873,0,0,0,0,0,0,0,0,0,0,0,0,0.758168275301024,0,0,0,0,0.30140963567143,0,0.12811372028485,0,0,0,0,0.175951124163949,0,0,0.348252166522167,0.411564272815887,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32167513193519,0,0,0,0,0.201683524623343,0,0.570676878337677,2.84717436926707,1.31759163779209,2.26201687920243,1.1937388322469,0.779856348476481,0.898819408654221,2.59365659849633,2.38969527905241,0,0.228497025219458,0,0.610953983535943,0,0.280543279561274,0.316182685621286,0.147610147979602,0.156998727841375,0.246794327843601,0,0,0,0,0,0.241177159752417,0,0.575392274901621,0.972811360650212,0.823684239564244,2.87536413054709,0.744281895337007,0.312037673114561,0.505157755894224,0.358794827043824,0,0.184753190166605,0,0.162964976442026,0.678980343100753,0.469380496577004,0,0,0.975668239288994,0.157635144106191,0,0.637819074629948,0.327726629431476,0.345369963731791,0.723245292907558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0,0,1.32745138339963,1.21390318077491,0.906970670894253,1.50884063804718,0.590603785761546,1.84461088766356,1.03371317267288,1.81766864738753,1.06949213515416,1.26414703174326,4.21674434299995,2.06271086496374,0,0,0.517434735131018,0,0.177340233642274,0.178368817602071,0,0,0.23467170806371,0.21183207086382,0.661585194164886,0.8244312647074,0.322928853391811,0.241251699712623,1.07435109602823,0,2.62332752966866,0,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,1.90934123603023,0.158167996790568,0.203319467126849,0.648032044930808,0.209088296014469,1.09181281873089,0.134864346384821,0.826534557253359,1.30877970992015,1.29614973291793,0.621339313086926,0,0,0,0,0.129159823477731,0,0.117357238645754,0,0,0,0,0,0.810900861160657,0.410843828659309,0.389762468933385,0,0,0,0,0,0,0.100826185136841,0.0974578807397524,0,0,0.226730383615211,0.221985953374065,0.717710852875806,0.503653849092235,0.19318959403219,0.187682475451182,0.183151624267265,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0.377252682772152,0.187283014939765,0.0640251524048693,0.229741875822453,0,0.231768651889711,0,0.412085900803307,0.147198920134397,1.02860775715625,0.887379030796687,0,0.436039249896986,0.0941093804153306,0.169229215783353,0.182927972872773,0.263069711437843,0.407412341537585,0.561142271657738,0.711810108745045,0.197008964751127,0.409231043169689,0.309873682371932,0.385813221962283,0,0,0,0,0,0 | |||
|short_description=p@chr8:109192512..109192529,+ | |||
}} |
Latest revision as of 20:57, 5 August 2015
Short description: | p@chr8:109192512..109192529, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:109192512..109192529, + |
Coexpression cluster: | MCL_coexpression_mm9:3651 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 2.15e-08 | 3 |
epithelial cell of tracheobronchial tree | 2.15e-08 | 3 |
branched duct epithelial cell | 2.15e-08 | 3 |
epithelial cell of lower respiratory tract | 2.15e-08 | 3 |
respiratory epithelial cell | 2.15e-08 | 3 |
tracheal epithelial cell | 2.15e-08 | 3 |
tracheoblast | 2.15e-08 | 3 |
epithelial cell | 3.54e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
pancreas | 2.72e-15 | 12 |
intestine | 2.11e-12 | 31 |
gastrointestinal system | 6.56e-12 | 47 |
small intestine | 2.98e-09 | 4 |
viscus | 6.28e-09 | 19 |
trachea | 2.15e-08 | 3 |
respiratory airway | 2.15e-08 | 3 |
tracheobronchial tree | 2.15e-08 | 3 |
lower respiratory tract | 2.15e-08 | 3 |
mucosa | 4.90e-08 | 15 |
ileal mucosa | 3.75e-07 | 3 |
ileum | 3.75e-07 | 3 |
mucosa of small intestine | 3.75e-07 | 3 |
wall of small intestine | 3.75e-07 | 3 |
digestive system | 8.10e-07 | 116 |
digestive tract | 8.10e-07 | 116 |
primitive gut | 8.10e-07 | 116 |