FFCP PHASE1:Mm9::chr12:85516589..85516609,-: Difference between revisions
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|id=chr12:85516589..85516609,-
|short_description=p@chr12:85516589..85516609,-
|description=CAGE_peak_at_chr12:85516589..85516609,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=66 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:85516589..85516609,- | |||
|description=CAGE_peak_at_chr12:85516589..85516609,- | |||
|id=chr12:85516589..85516609,- | |||
|ontology_enrichment_celltype=CL:0000063!5.01e-10!66;CL:0002563!1.86e-09!9;CL:0002251!1.86e-09!9;CL:0000838!5.14e-09!12;CL:0000791!2.81e-08!9;CL:0000789!2.81e-08!9;CL:0002420!2.81e-08!9;CL:0002419!2.81e-08!9;CL:0000790!2.81e-08!9;CL:0000542!3.77e-08!13;CL:0000051!3.77e-08!13;CL:0000084!5.46e-08!11;CL:0000827!5.46e-08!11;CL:0000624!5.86e-07!8;CL:0000066!6.79e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.42e-19,9;CL:0000789,2.42e-19,9;CL:0002420,2.42e-19,9;CL:0002419,2.42e-19,9;CL:0000790,2.42e-19,9;CL:0000084,7.78e-16,11;CL:0000827,7.78e-16,11;CL:0000838,1.62e-14,12;CL:0000624,2.62e-14,8;CL:0000542,2.11e-13,13;CL:0000051,2.11e-13,13;CL:0000738,3.04e-10,17;CL:0002087,3.04e-10,17;CL:0000815,1.56e-08,1;CL:0000792,1.56e-08,1;CL:0000625,4.10e-08,1;CL:0000213,6.57e-08,1;CL:0002078,6.57e-08,1;CL:0000115,6.57e-08,1;CL:0002262,6.57e-08,1;CL:1000398,6.57e-08,1;CL:0000057,7.68e-08,1;CL:0000632,7.68e-08,1;CL:0002031,6.12e-07,25;CL:0002320,8.52e-07,46;CL:0000134,8.52e-07,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,4.52e-10,3;DOID:4045,4.52e-10,3 | |||
|ontology_enrichment_uberon=UBERON:0003350!1.86e-09!9;UBERON:0004808!1.86e-09!9;UBERON:0001277!1.86e-09!9;UBERON:0000485!3.69e-09!11;UBERON:0000344!1.46e-07!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,6.57e-08,1;UBERON:0001281,6.57e-08,1;UBERON:0000353,6.57e-08,1;UBERON:0003497,6.57e-08,1;UBERON:0003909,6.57e-08,1;UBERON:0003928,6.57e-08,1;UBERON:0003835,6.57e-08,1;UBERON:0003513,6.57e-08,1;UBERON:0001280,6.57e-08,1;UBERON:0004647,6.57e-08,1;UBERON:0002294,6.57e-08,1;UBERON:0001173,6.57e-08,1;UBERON:0004912,6.57e-08,1;UBERON:0005171,6.57e-08,1;UBERON:0002384,8.52e-07,46 | |||
|phase1_expression=0.160148847104794,0.348975407639361,0.454999239389536,0.30246421130683,0,0.16787927191189,0.700837921786577,7.48915275961142,0.985521055061667,0.234064526321993,0,0,6.16322627752341,4.10875891369288,0,0,0,0.630924330716475,0,0,0,0.0992909512008853,0,0.159992422793407,0.22940928106717,0.57423196411502,0,0.646413698057667,0,0,0,0,0,0,0.577703239502549,0.664938581433969,1.22501613757421,2.51118978442145,0.7813353445238,3.14114246384279,2.94115744015507,6.14740936462601,1.45653105909346,0,0,0,0,0,0,0,0,0,0.335565212115473,2.17608642603403,2.68875039313971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02905142091174,1.72084775396277,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253359865475099,0,0.11418387971906,0,0,0,0.304465478312141,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0.11981512450592,0.599902730993408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0.556094498451196,0.348252166522167,0,0,0,0.257347907114715,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0.238043640886014,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0.188605079755898,0.295301892880773,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0.291480836629851,0,0,0,0,0,0.136694227721025,0,0.339956859987711,0.979660166265606,0.414599921413271,0,0,0.203319467126849,0.108005340821801,0,0.218362563746178,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0.263069711437843,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.160148847104794,0.348975407639361,0.454999239389536,0.30246421130683,0,0.16787927191189,0.700837921786577,7.48915275961142,0.985521055061667,0.234064526321993,0,0,6.16322627752341,4.10875891369288,0,0,0,0.630924330716475,0,0,0,0.0992909512008853,0,0.159992422793407,0.22940928106717,0.57423196411502,0,0.646413698057667,0,0,0,0,0,0,0.577703239502549,0.664938581433969,1.22501613757421,2.51118978442145,0.7813353445238,3.14114246384279,2.94115744015507,6.14740936462601,1.45653105909346,0,0,0,0,0,0,0,0,0,0.335565212115473,2.17608642603403,2.68875039313971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02905142091174,1.72084775396277,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253359865475099,0,0.11418387971906,0,0,0,0.304465478312141,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0.11981512450592,0.599902730993408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0.556094498451196,0.348252166522167,0,0,0,0.257347907114715,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0.238043640886014,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0.188605079755898,0.295301892880773,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0.291480836629851,0,0,0,0,0,0.136694227721025,0,0.339956859987711,0.979660166265606,0.414599921413271,0,0,0.203319467126849,0.108005340821801,0,0.218362563746178,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0.263069711437843,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:85516589..85516609,- | |||
}} | }} |
Latest revision as of 09:22, 5 August 2015
Short description: | p@chr12:85516589..85516609, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:85516589..85516609, - |
Coexpression cluster: | MCL_coexpression_mm9:66 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.42e-19 | 9 |
alpha-beta T cell | 2.42e-19 | 9 |
immature T cell | 2.42e-19 | 9 |
mature T cell | 2.42e-19 | 9 |
immature alpha-beta T cell | 2.42e-19 | 9 |
T cell | 7.78e-16 | 11 |
pro-T cell | 7.78e-16 | 11 |
lymphoid lineage restricted progenitor cell | 1.62e-14 | 12 |
CD4-positive, alpha-beta T cell | 2.62e-14 | 8 |
lymphocyte | 2.11e-13 | 13 |
common lymphoid progenitor | 2.11e-13 | 13 |
leukocyte | 3.04e-10 | 17 |
nongranular leukocyte | 3.04e-10 | 17 |
regulatory T cell | 1.56e-08 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.56e-08 | 1 |
CD8-positive, alpha-beta T cell | 4.10e-08 | 1 |
lining cell | 6.57e-08 | 1 |
meso-epithelial cell | 6.57e-08 | 1 |
endothelial cell | 6.57e-08 | 1 |
endothelial cell of sinusoid | 6.57e-08 | 1 |
endothelial cell of hepatic sinusoid | 6.57e-08 | 1 |
fibroblast | 7.68e-08 | 1 |
hepatic stellate cell | 7.68e-08 | 1 |
hematopoietic lineage restricted progenitor cell | 6.12e-07 | 25 |
connective tissue cell | 8.52e-07 | 46 |
mesenchymal cell | 8.52e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
bile duct | 6.57e-08 | 1 |
hepatic sinusoid | 6.57e-08 | 1 |
parenchyma | 6.57e-08 | 1 |
abdomen blood vessel | 6.57e-08 | 1 |
sinusoid | 6.57e-08 | 1 |
digestive system duct | 6.57e-08 | 1 |
abdominal segment blood vessel | 6.57e-08 | 1 |
trunk blood vessel | 6.57e-08 | 1 |
liver parenchyma | 6.57e-08 | 1 |
liver lobule | 6.57e-08 | 1 |
biliary system | 6.57e-08 | 1 |
biliary tree | 6.57e-08 | 1 |
biliary bud | 6.57e-08 | 1 |
hepatic duct | 6.57e-08 | 1 |
connective tissue | 8.52e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 4.52e-10 | 3 |
muscle cancer | 4.52e-10 | 3 |