FFCP PHASE1:Mm9::chr13:49311525..49311571,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr13:49311525..49311571,+
|short_description=p@chr13:49311525..49311571,+
|description=CAGE_peak_at_chr13:49311525..49311571,+
|association_with_transcript=NA
...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=66 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr13:49311525..49311571,+ | |||
|description=CAGE_peak_at_chr13:49311525..49311571,+ | |||
|id=chr13:49311525..49311571,+ | |||
|ontology_enrichment_celltype=CL:0000063!5.59e-13!66;CL:0000144!1.14e-08!121;CL:0000012!1.14e-08!121;CL:0002320!1.76e-08!46;CL:0000134!1.76e-08!46;CL:0000988!6.39e-08!32;CL:0002032!6.39e-08!32;CL:0000037!6.39e-08!32;CL:0000566!6.39e-08!32;CL:0000837!6.39e-08!32;CL:0000219!8.61e-08!54;CL:0002371!1.83e-07!118;CL:0000738!3.48e-07!17;CL:0002087!3.48e-07!17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.87e-12,32;CL:0002032,1.87e-12,32;CL:0000037,1.87e-12,32;CL:0000837,1.87e-12,32;CL:0000738,6.42e-11,17;CL:0002087,6.42e-11,17;CL:0002320,1.83e-10,46;CL:0000134,1.83e-10,46;CL:0000838,7.19e-10,12;CL:0000791,7.69e-10,9;CL:0000789,7.69e-10,9;CL:0002420,7.69e-10,9;CL:0002419,7.69e-10,9;CL:0000790,7.69e-10,9;CL:0000034,1.04e-09,97;CL:0000219,1.36e-09,54;CL:0002563,2.80e-09,9;CL:0002251,2.80e-09,9;CL:0000542,5.01e-09,13;CL:0000051,5.01e-09,13;CL:0000624,6.00e-08,8;CL:0000084,6.45e-08,11;CL:0000827,6.45e-08,11;CL:0000723,1.54e-07,91;CL:0000048,1.54e-07,91;CL:0002076,5.57e-07,15;CL:0002031,7.01e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.04e-08,3;DOID:4045,1.04e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0002384!1.76e-08!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.83e-10,46;UBERON:0003350,2.80e-09,9;UBERON:0004808,2.80e-09,9;UBERON:0001277,2.80e-09,9;UBERON:0000344,5.35e-09,15;UBERON:0001242,2.75e-08,13;UBERON:0001262,2.75e-08,13;UBERON:0004786,2.75e-08,13;UBERON:0000485,1.81e-07,11 | |||
|phase1_expression=0.320297694209588,1.39590163055744,0.909998478779072,7.56160528267075,7.51343594919521,1.17515490338323,0.233612640595526,9.16775596435192,0.985521055061667,1.40438715793196,0.171217968225505,0.0797721589953364,4.62241970814255,5.15780374272085,0.666219523631325,0,0,0.630924330716475,0.548457734422955,0.84877930359606,0.0850432901510698,0.496454756004426,0.783599367416806,1.11994695955385,0.91763712426868,0.57423196411502,0.86152399231815,0.430942465371778,0.190023419456374,0,0.443461021310609,0,0,0,2.88851619751275,0.664938581433969,2.85837098767317,8.78916424547506,5.4693474116666,6.28228492768558,33.5291948177678,6.83045484958446,6.311634589405,0.755380907853464,0.405507724878058,0.550640256485045,1.56478268869608,0.218025156380447,0.219686182734472,0,0.55994568650145,0,10.2347389695219,7.97898356212479,3.6970317905671,0.257259436035947,0,0.515672092277442,0,0.528990979272033,0,0,0.889294796111139,0.449949858640699,0.988866362566974,1.4209602298922,0.299600110518405,0.384218305321555,0,0,0,0.285650984403804,0.220868540951614,0.122490799214954,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0.294628585473668,0.142371680799103,0,0.151452386666368,0.0755715601067855,7.53647670624362,0.860423876981386,0,0.539703191637817,0,0,0,0.681721290312231,0,0.70667914902068,0.985903938436763,1.28326477414318,0,0,0.216491041011214,0,0.505524445014783,0,0.258937883647172,0,0.346970653532272,0.608930956624282,0.230615497256059,0.301445281105245,0.117588707135705,0.125666591329675,0,0.289198713839823,0,0,0.220841518460394,0,0,0,0,0,2.39630249011841,1.79970819298022,3.17675567682662,0,0.457500602818626,0.125654352112864,0,0,0,0.162241263067758,0.101839363850316,0.124406970610093,0,0.210441855886474,0.130120442962704,0,0.360124259610698,0.452114453507145,0.136072998302656,0.12811372028485,0.187403449119458,1.03481348295606,0.215567992932842,0.378212160335639,0.351902248327898,0,0.278047249225598,0.696504333044333,0.411564272815887,0.199034266818493,2.80885274925294,2.31613116403244,0.852490498186778,0,0,0.720248245844059,0.23674473558521,0,0,0.465067889500816,0,0.116765342367169,0,0.164167464079095,0,0.146199987425332,0,0.268412837520744,0,0,1.98251269790279,0.793351699990633,0.213288250535234,0,0.128867461322093,0,0.22237804384487,0,0.474529061544512,0.494096864172033,0.251335208800269,0,0,0.898819408654221,0,0.398282546508734,0.189667900953082,0.228497025219458,1.1270773567308,0.610953983535943,0,0,0,0.442830443938806,0.470996183524124,0.246794327843601,0.296452627087149,0,0,0,0,0,0.25462585178142,0.287696137450811,0.162135226775035,0.274561413188081,0,0,0,0,0,0,0,0.189491411770485,0,0.169745085775188,0,0.502518772325447,0.238043640886014,0.195133647857799,0.315270288212382,0.221464689648775,0,0.163863314715738,0.172684981865896,0.289298117163023,9.04747703635634,1.63171705145613,0,0.275936746304732,0,0.117211686592203,0,0,0.315508219416257,0.780877488593277,0.215423397732799,0.238968797952552,0.668396022247182,0.283076530788832,0,0,0,0,0.283880170416537,0.35613120733451,0.488660878060728,0,0,0.242780636154981,0,0.188605079755898,0.295301892880773,0.922305443831782,0,0.727067458955011,0.356497378384721,0,0,0,0,0.540183282093931,0.388076051348264,0.214337035031592,0.354680467284547,0,0.493647061806363,0,0,0.21183207086382,0,0,0.322928853391811,0.241251699712623,0.238744688006273,0,0.874442509889552,0,0.512612642393558,0.206386867963223,0.370389054739423,0,0.546776910884101,0,3.56954702987096,6.01791244991729,4.14599921413271,0,0,0,0,0.627264888043406,0.218362563746178,0.134864346384821,0.41326727862668,0.26175594198403,0.129614973291793,0,0,0.149516546043979,0.330916980914195,0,0.387479470433193,0,0.117357238645754,0.5208175393758,0.104859344425711,0,0,0,0.405450430580328,0.102710957164827,0,0.179026695667481,0.39736270956253,0,0.295379054349154,0.100966449948148,0.0762068066549998,0.100826185136841,0.0974578807397524,0.0962118416403295,0.350630706544707,0.226730383615211,0,0.269141569828427,0,0,0.187682475451182,0.183151624267265,0,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0.103787347584177,0,0.170733605754134,0,0.209613162627982,0.551530525350042,0,0.412070114477788,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0,0.192909220463705,0,0.294397840268795,0.342869252385415,0.177475806159338,0.238436189947321,0,0.188218760830661,0.0846146078916765,0,0,0.407412341537585,0,0.237270036248348,0.29551344712669,0,0.154936841185966,0,0.249810577937946,0,0.429742108096597,0.382576664137687,0.882365676478062,0.231867835620421 | |phase1_expression=0.320297694209588,1.39590163055744,0.909998478779072,7.56160528267075,7.51343594919521,1.17515490338323,0.233612640595526,9.16775596435192,0.985521055061667,1.40438715793196,0.171217968225505,0.0797721589953364,4.62241970814255,5.15780374272085,0.666219523631325,0,0,0.630924330716475,0.548457734422955,0.84877930359606,0.0850432901510698,0.496454756004426,0.783599367416806,1.11994695955385,0.91763712426868,0.57423196411502,0.86152399231815,0.430942465371778,0.190023419456374,0,0.443461021310609,0,0,0,2.88851619751275,0.664938581433969,2.85837098767317,8.78916424547506,5.4693474116666,6.28228492768558,33.5291948177678,6.83045484958446,6.311634589405,0.755380907853464,0.405507724878058,0.550640256485045,1.56478268869608,0.218025156380447,0.219686182734472,0,0.55994568650145,0,10.2347389695219,7.97898356212479,3.6970317905671,0.257259436035947,0,0.515672092277442,0,0.528990979272033,0,0,0.889294796111139,0.449949858640699,0.988866362566974,1.4209602298922,0.299600110518405,0.384218305321555,0,0,0,0.285650984403804,0.220868540951614,0.122490799214954,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0.294628585473668,0.142371680799103,0,0.151452386666368,0.0755715601067855,7.53647670624362,0.860423876981386,0,0.539703191637817,0,0,0,0.681721290312231,0,0.70667914902068,0.985903938436763,1.28326477414318,0,0,0.216491041011214,0,0.505524445014783,0,0.258937883647172,0,0.346970653532272,0.608930956624282,0.230615497256059,0.301445281105245,0.117588707135705,0.125666591329675,0,0.289198713839823,0,0,0.220841518460394,0,0,0,0,0,2.39630249011841,1.79970819298022,3.17675567682662,0,0.457500602818626,0.125654352112864,0,0,0,0.162241263067758,0.101839363850316,0.124406970610093,0,0.210441855886474,0.130120442962704,0,0.360124259610698,0.452114453507145,0.136072998302656,0.12811372028485,0.187403449119458,1.03481348295606,0.215567992932842,0.378212160335639,0.351902248327898,0,0.278047249225598,0.696504333044333,0.411564272815887,0.199034266818493,2.80885274925294,2.31613116403244,0.852490498186778,0,0,0.720248245844059,0.23674473558521,0,0,0.465067889500816,0,0.116765342367169,0,0.164167464079095,0,0.146199987425332,0,0.268412837520744,0,0,1.98251269790279,0.793351699990633,0.213288250535234,0,0.128867461322093,0,0.22237804384487,0,0.474529061544512,0.494096864172033,0.251335208800269,0,0,0.898819408654221,0,0.398282546508734,0.189667900953082,0.228497025219458,1.1270773567308,0.610953983535943,0,0,0,0.442830443938806,0.470996183524124,0.246794327843601,0.296452627087149,0,0,0,0,0,0.25462585178142,0.287696137450811,0.162135226775035,0.274561413188081,0,0,0,0,0,0,0,0.189491411770485,0,0.169745085775188,0,0.502518772325447,0.238043640886014,0.195133647857799,0.315270288212382,0.221464689648775,0,0.163863314715738,0.172684981865896,0.289298117163023,9.04747703635634,1.63171705145613,0,0.275936746304732,0,0.117211686592203,0,0,0.315508219416257,0.780877488593277,0.215423397732799,0.238968797952552,0.668396022247182,0.283076530788832,0,0,0,0,0.283880170416537,0.35613120733451,0.488660878060728,0,0,0.242780636154981,0,0.188605079755898,0.295301892880773,0.922305443831782,0,0.727067458955011,0.356497378384721,0,0,0,0,0.540183282093931,0.388076051348264,0.214337035031592,0.354680467284547,0,0.493647061806363,0,0,0.21183207086382,0,0,0.322928853391811,0.241251699712623,0.238744688006273,0,0.874442509889552,0,0.512612642393558,0.206386867963223,0.370389054739423,0,0.546776910884101,0,3.56954702987096,6.01791244991729,4.14599921413271,0,0,0,0,0.627264888043406,0.218362563746178,0.134864346384821,0.41326727862668,0.26175594198403,0.129614973291793,0,0,0.149516546043979,0.330916980914195,0,0.387479470433193,0,0.117357238645754,0.5208175393758,0.104859344425711,0,0,0,0.405450430580328,0.102710957164827,0,0.179026695667481,0.39736270956253,0,0.295379054349154,0.100966449948148,0.0762068066549998,0.100826185136841,0.0974578807397524,0.0962118416403295,0.350630706544707,0.226730383615211,0,0.269141569828427,0,0,0.187682475451182,0.183151624267265,0,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0.103787347584177,0,0.170733605754134,0,0.209613162627982,0.551530525350042,0,0.412070114477788,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0,0.192909220463705,0,0.294397840268795,0.342869252385415,0.177475806159338,0.238436189947321,0,0.188218760830661,0.0846146078916765,0,0,0.407412341537585,0,0.237270036248348,0.29551344712669,0,0.154936841185966,0,0.249810577937946,0,0.429742108096597,0.382576664137687,0.882365676478062,0.231867835620421 | ||
|short_description=p@chr13:49311525..49311571,+ | |||
}} | }} |
Latest revision as of 01:59, 6 August 2015
Short description: | p@chr13:49311525..49311571, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:49311525..49311571, + |
Coexpression cluster: | MCL_coexpression_mm9:66 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.87e-12 | 32 |
hematopoietic oligopotent progenitor cell | 1.87e-12 | 32 |
hematopoietic stem cell | 1.87e-12 | 32 |
hematopoietic multipotent progenitor cell | 1.87e-12 | 32 |
leukocyte | 6.42e-11 | 17 |
nongranular leukocyte | 6.42e-11 | 17 |
connective tissue cell | 1.83e-10 | 46 |
mesenchymal cell | 1.83e-10 | 46 |
lymphoid lineage restricted progenitor cell | 7.19e-10 | 12 |
mature alpha-beta T cell | 7.69e-10 | 9 |
alpha-beta T cell | 7.69e-10 | 9 |
immature T cell | 7.69e-10 | 9 |
mature T cell | 7.69e-10 | 9 |
immature alpha-beta T cell | 7.69e-10 | 9 |
stem cell | 1.04e-09 | 97 |
motile cell | 1.36e-09 | 54 |
intestinal epithelial cell | 2.80e-09 | 9 |
epithelial cell of alimentary canal | 2.80e-09 | 9 |
lymphocyte | 5.01e-09 | 13 |
common lymphoid progenitor | 5.01e-09 | 13 |
CD4-positive, alpha-beta T cell | 6.00e-08 | 8 |
T cell | 6.45e-08 | 11 |
pro-T cell | 6.45e-08 | 11 |
somatic stem cell | 1.54e-07 | 91 |
multi fate stem cell | 1.54e-07 | 91 |
endo-epithelial cell | 5.57e-07 | 15 |
hematopoietic lineage restricted progenitor cell | 7.01e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.83e-10 | 46 |
epithelium of mucosa | 2.80e-09 | 9 |
gastrointestinal system epithelium | 2.80e-09 | 9 |
intestinal epithelium | 2.80e-09 | 9 |
mucosa | 5.35e-09 | 15 |
intestinal mucosa | 2.75e-08 | 13 |
wall of intestine | 2.75e-08 | 13 |
gastrointestinal system mucosa | 2.75e-08 | 13 |
simple columnar epithelium | 1.81e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.04e-08 | 3 |
muscle cancer | 1.04e-08 | 3 |