FFCP PHASE1:Mm9::chr15:33790939..33790943,+: Difference between revisions
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|id=chr15:33790939..33790943,+
|short_description=p@chr15:33790939..33790943,+
|description=CAGE_peak_at_chr15:33790939..33790943,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=499 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr15:33790939..33790943,+ | |||
|description=CAGE_peak_at_chr15:33790939..33790943,+ | |||
|id=chr15:33790939..33790943,+ | |||
|ontology_enrichment_celltype=CL:0000239!9.20e-33!6;CL:0000677!9.20e-33!6;CL:0000212!9.20e-33!6;CL:0000584!9.20e-33!6;CL:0000075!4.70e-28!7;CL:0002563!9.07e-22!9;CL:0002251!9.07e-22!9;CL:0000066!8.46e-21!25;CL:0000473!2.02e-17!3;CL:0000627!2.02e-17!3;CL:0000682!2.02e-17!3;CL:0002076!2.75e-17!15;CL:0000223!8.04e-13!20;CL:0000063!4.37e-07!66 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,3.40e-24,3;CL:0000239,1.93e-21,6;CL:0000677,1.93e-21,6;CL:0000584,1.93e-21,6;CL:0000075,1.93e-18,7;CL:0000066,3.71e-15,25;CL:0002563,1.98e-14,9;CL:0002251,1.98e-14,9;CL:0000473,9.26e-11,7;CL:0002076,8.72e-09,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!9.58e-44!15;UBERON:0001242!1.06e-33!13;UBERON:0000060!1.06e-33!13;UBERON:0001262!1.06e-33!13;UBERON:0004786!1.06e-33!13;UBERON:0004923!7.20e-27!24;UBERON:0003350!9.07e-22!9;UBERON:0004808!9.07e-22!9;UBERON:0001277!9.07e-22!9;UBERON:0000485!9.24e-18!11;UBERON:0000331!9.33e-18!3;UBERON:0002116!9.33e-18!3;UBERON:0001204!9.33e-18!3;UBERON:0001168!9.33e-18!3;UBERON:0001962!2.02e-12!2;UBERON:0001961!2.02e-12!2;UBERON:0001744!2.02e-12!2;UBERON:0000160!1.15e-11!43;UBERON:0002465!1.42e-08!3;UBERON:0005409!3.80e-08!59;UBERON:0000064!9.16e-08!99;UBERON:0003199!5.34e-07!1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,9.22e-34,15;UBERON:0001242,3.91e-22,13;UBERON:0001262,3.91e-22,13;UBERON:0004786,3.91e-22,13;UBERON:0004923,5.64e-21,24;UBERON:0001962,4.76e-17,2;UBERON:0001961,4.76e-17,2;UBERON:0001744,4.76e-17,2;UBERON:0003350,1.98e-14,9;UBERON:0004808,1.98e-14,9;UBERON:0001277,1.98e-14,9;UBERON:0000331,4.51e-12,3;UBERON:0002116,4.51e-12,3;UBERON:0001204,4.51e-12,3;UBERON:0001168,4.51e-12,3;UBERON:0000485,7.17e-12,11;UBERON:0002465,1.07e-11,3;UBERON:0003199,2.52e-09,1;UBERON:0002108,2.78e-09,4;UBERON:0000160,3.34e-09,31 | |||
|phase1_expression=0,1.39590163055744,0.909998478779072,1.51232105653415,2.00358291978539,0.503637815735669,3.50418960893289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55987876469451,2.2940928106717,1.14846392823004,3.01533397311352,1.72376986148711,7.9809836171677,0.504060259519861,3.32595765982957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,1.39590163055744,0.909998478779072,1.51232105653415,2.00358291978539,0.503637815735669,3.50418960893289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55987876469451,2.2940928106717,1.14846392823004,3.01533397311352,1.72376986148711,7.9809836171677,0.504060259519861,3.32595765982957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr15:33790939..33790943,+ | |||
}} | }} |
Latest revision as of 04:38, 5 August 2015
Short description: | p@chr15:33790939..33790943, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:33790939..33790943, + |
Coexpression cluster: | MCL_coexpression_mm9:499 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 3.40e-24 | 3 |
brush border epithelial cell | 1.93e-21 | 6 |
gut absorptive cell | 1.93e-21 | 6 |
enterocyte | 1.93e-21 | 6 |
columnar/cuboidal epithelial cell | 1.93e-18 | 7 |
epithelial cell | 3.71e-15 | 25 |
intestinal epithelial cell | 1.98e-14 | 9 |
epithelial cell of alimentary canal | 1.98e-14 | 9 |
defensive cell | 9.26e-11 | 7 |
endo-epithelial cell | 8.72e-09 | 15 |
Ontology term | p-value | n |
---|---|---|
mucosa | 9.22e-34 | 15 |
intestinal mucosa | 3.91e-22 | 13 |
wall of intestine | 3.91e-22 | 13 |
gastrointestinal system mucosa | 3.91e-22 | 13 |
organ component layer | 5.64e-21 | 24 |
gut-associated lymphoid tissue | 4.76e-17 | 2 |
mucosa-associated lymphoid tissue | 4.76e-17 | 2 |
lymphoid tissue | 4.76e-17 | 2 |
epithelium of mucosa | 1.98e-14 | 9 |
gastrointestinal system epithelium | 1.98e-14 | 9 |
intestinal epithelium | 1.98e-14 | 9 |
ileal mucosa | 4.51e-12 | 3 |
ileum | 4.51e-12 | 3 |
mucosa of small intestine | 4.51e-12 | 3 |
wall of small intestine | 4.51e-12 | 3 |
simple columnar epithelium | 7.17e-12 | 11 |
lymphoid system | 1.07e-11 | 3 |
egg chamber | 2.52e-09 | 1 |
small intestine | 2.78e-09 | 4 |
intestine | 3.34e-09 | 31 |