Personal tools

FFCP PHASE1:Mm9::chr15:78396408..78396426,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chr15:78396408..78396426,+ |short_description=p@chr15:78396408..78396426,+ |description=CAGE_peak_at_chr15:78396408..78396426,+ |association_with_transcript=NA ...")
 
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr15:78396408..78396426,+
|DHSsupport=NA
|short_description=p@chr15:78396408..78396426,+
|DPIdataset=NA
|description=CAGE_peak_at_chr15:78396408..78396426,+
|association_with_transcript=NA
|EntrezGene=NA
|EntrezGene=NA
|HGNC=
|HGNC=
|MCL_coexpression_id=1376
|TSSclassifier=NA
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|cluster_id=chr15:78396408..78396426,+
|description=CAGE_peak_at_chr15:78396408..78396426,+
|id=chr15:78396408..78396426,+
|ontology_enrichment_celltype=CL:0000988!2.73e-17!32;CL:0002032!2.73e-17!32;CL:0000037!2.73e-17!32;CL:0000566!2.73e-17!32;CL:0000837!2.73e-17!32;CL:0002031!8.22e-17!25;CL:0002320!7.22e-12!46;CL:0000134!7.22e-12!46;CL:0000049!1.66e-10!19;CL:0000738!3.08e-09!17;CL:0002087!3.08e-09!17;CL:0000763!3.16e-09!16;CL:0000839!3.99e-09!13;CL:0000838!6.12e-09!12;CL:0000219!9.70e-09!54;CL:0000063!1.15e-08!66;CL:0000084!2.55e-08!11;CL:0000827!2.55e-08!11;CL:0000050!6.02e-08!9;CL:0000542!6.83e-08!13;CL:0000051!6.83e-08!13;CL:0000791!8.97e-07!9;CL:0000789!8.97e-07!9;CL:0002420!8.97e-07!9;CL:0002419!8.97e-07!9;CL:0000790!8.97e-07!9
|ontology_enrichment_celltype_v019_2=CL:0002031,6.80e-30,25;CL:0000988,1.15e-24,32;CL:0002032,1.15e-24,32;CL:0000037,1.15e-24,32;CL:0000837,1.15e-24,32;CL:0002320,1.29e-21,46;CL:0000134,1.29e-21,46;CL:0000839,7.23e-18,13;CL:0000219,1.74e-17,54;CL:0000763,9.21e-17,16;CL:0000738,5.88e-16,17;CL:0002087,5.88e-16,17;CL:0000050,6.07e-14,9;CL:0000049,1.15e-13,19;CL:0000838,4.29e-13,12;CL:0000542,6.07e-12,13;CL:0000051,6.07e-12,13;CL:0000084,1.15e-11,11;CL:0000827,1.15e-11,11;CL:0000723,6.46e-11,91;CL:0000048,6.46e-11,91;CL:0000034,7.88e-10,97;CL:0000553,1.62e-08,6;CL:0000556,1.62e-08,6;CL:0000791,2.61e-08,9;CL:0000789,2.61e-08,9;CL:0002420,2.61e-08,9;CL:0002419,2.61e-08,9;CL:0000790,2.61e-08,9;CL:0002092,6.26e-08,3;CL:0002540,6.26e-08,3;CL:0000764,3.68e-07,3;CL:0000765,3.68e-07,3;CL:0000038,3.68e-07,3;CL:0000547,3.68e-07,3;CL:0000624,9.69e-07,8
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=DOID:0050686,1.40e-12,6;DOID:2531,3.68e-07,3;DOID:0060083,3.68e-07,3;DOID:1240,3.68e-07,3;DOID:0060100,5.13e-07,3;DOID:4045,5.13e-07,3
|ontology_enrichment_uberon=UBERON:0002193!2.23e-21!48;UBERON:0002390!8.81e-21!45;UBERON:0003061!8.81e-21!45;UBERON:0002405!1.04e-16!70;UBERON:0004177!4.20e-12!29;UBERON:0002384!7.22e-12!46;UBERON:0002371!1.79e-09!16;UBERON:0002370!2.50e-09!23;UBERON:0000974!2.50e-09!23;UBERON:0004807!2.50e-09!23;UBERON:0005058!2.50e-09!23;UBERON:0003351!2.50e-09!23;UBERON:0009113!2.50e-09!23;UBERON:0003295!2.50e-09!23;UBERON:0009722!2.50e-09!23;UBERON:0005562!2.50e-09!23;UBERON:0007690!2.50e-09!23;UBERON:0001474!6.71e-09!22;UBERON:0004765!6.71e-09!22;UBERON:0001434!6.71e-09!22;UBERON:0006562!1.24e-08!24;UBERON:0003408!1.24e-08!24;UBERON:0001557!1.24e-08!24;UBERON:0001042!1.24e-08!24;UBERON:0008814!1.24e-08!24;UBERON:0009145!1.24e-08!24;UBERON:0003081!1.34e-08!88;UBERON:0005057!2.03e-08!51;UBERON:0002204!1.07e-07!32;UBERON:0000072!6.81e-07!27
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.90e-24,48;UBERON:0002405,1.90e-24,48;UBERON:0002390,2.45e-22,45;UBERON:0003061,2.45e-22,45;UBERON:0002384,1.29e-21,46;UBERON:0002371,2.66e-17,16;UBERON:0002204,7.43e-12,32;UBERON:0001474,8.52e-12,22;UBERON:0004765,8.52e-12,22;UBERON:0001434,8.52e-12,22;UBERON:0003081,1.30e-08,87;UBERON:0004177,3.08e-08,29;UBERON:0005057,3.08e-08,29;UBERON:0002370,7.98e-08,23;UBERON:0000974,7.98e-08,23;UBERON:0004807,7.98e-08,23;UBERON:0005058,7.98e-08,23;UBERON:0003351,7.98e-08,23;UBERON:0009113,7.98e-08,23;UBERON:0003295,7.98e-08,23;UBERON:0009722,7.98e-08,23;UBERON:0005562,7.98e-08,23;UBERON:0007690,7.98e-08,23;UBERON:0006562,2.08e-07,24;UBERON:0003408,2.08e-07,24;UBERON:0001557,2.08e-07,24;UBERON:0001042,2.08e-07,24;UBERON:0008814,2.08e-07,24;UBERON:0009145,2.08e-07,24;UBERON:0000926,9.61e-07,120;UBERON:0004120,9.61e-07,120;UBERON:0006603,9.61e-07,120
|phase1_expression=0,0.697950815278722,0.909998478779072,0,0,0.503637815735669,1.16806320297763,6.19791952519566,1.54867594366833,0.936258105287974,0.171217968225505,0.239316476986009,4.10881751834894,6.99363219351979,1.99865857089398,1.41732687172878,0.699561878128147,3.78554598429885,3.15363197293199,2.97072756258621,0.0850432901510698,4.17021995043718,2.61199789138935,1.59992422793407,1.60586496747019,0.57423196411502,0,2.37018355954478,0,0,1.55211357458713,2.54012269383853,1.84519436275371,15.8481681015439,0,0,0,7.11503772252743,1.5626706890476,2.61761871986899,10.5881667845583,3.41522742479223,4.36959317728038,0,0,0,0,0,0,0,0,0,1.51004345451963,4.35217285206807,2.68875039313971,0,0,0.515672092277442,0,0,0,0,0,8.54904731417329,14.8329954385046,5.6838409195688,2.39680088414724,2.68952813725088,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0,0,0.29688427812965,0,0,0,0.301445281105245,0,0,0,0,0.884610551949874,0.161766849947409,0.220841518460394,0.484875253135222,0,0.292780797011547,0,0.255457055208591,0.718890747035522,0.599902730993408,0.381210681219194,0,0,0,0,0,0,0,0,0.497627882440372,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0.278047249225598,0.348252166522167,0.205782136407943,0,0,0.51469581422943,2.27330799516474,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0.216138049874694,0.398282546508734,0,0.114248512609729,0,0,0,0,0.0632365371242573,0.147610147979602,0,0,0.296452627087149,0.166845105716094,0,0.674586337154561,0.405720242777006,0.964708639009667,0.50925170356284,0.575392274901621,0.486405680325106,0,0,0.372140947668503,0,0,0,0,0.369506380333209,0,0.162964976442026,0.169745085775188,0,0,0,0,0,0.221464689648775,0,0.491589944147214,0.518054945597687,0.289298117163023,0,7.07077388964322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.162886959353576,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0,0,0.683483523191411,0.412773735926445,1.29636169158798,0.376736914009382,0.410082683163076,1.83022538565218,0.509935289981566,0.839708713941948,0.414599921413271,0,0,0,0,0,0,0,0.0826534557253359,0.26175594198403,0.129614973291793,0,0,0,0.165458490457098,0,0,0.337912250981556,0,0,0,0,0,1.26404448251271,0.405450430580328,1.43795340030758,1.42912905275575,0.716106782669926,1.98681354781265,1.56254084375959,1.62458479892035,0.706765149637033,0.228620419965,1.31074040677893,0.974578807397524,0.962118416403295,1.16876902181569,0,0,0,0,0,0.187682475451182,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0.183843508450014,0,0,0.64183841918363,0.252697211763798,0,0,0.0936415074698824,0.192075457214608,0.0574354689556133,0,0,0.192909220463705,0,0.147198920134397,0,0,0,0.145346416632329,0.282328141245992,0,0,0.263069711437843,0.271608227691724,0,0.118635018124174,0.0985044823755635,0.409231043169689,0.154936841185966,0.385813221962283,0.249810577937946,0,0,0,0.441182838239031,0.231867835620421
|phase1_expression=0,0.697950815278722,0.909998478779072,0,0,0.503637815735669,1.16806320297763,6.19791952519566,1.54867594366833,0.936258105287974,0.171217968225505,0.239316476986009,4.10881751834894,6.99363219351979,1.99865857089398,1.41732687172878,0.699561878128147,3.78554598429885,3.15363197293199,2.97072756258621,0.0850432901510698,4.17021995043718,2.61199789138935,1.59992422793407,1.60586496747019,0.57423196411502,0,2.37018355954478,0,0,1.55211357458713,2.54012269383853,1.84519436275371,15.8481681015439,0,0,0,7.11503772252743,1.5626706890476,2.61761871986899,10.5881667845583,3.41522742479223,4.36959317728038,0,0,0,0,0,0,0,0,0,1.51004345451963,4.35217285206807,2.68875039313971,0,0,0.515672092277442,0,0,0,0,0,8.54904731417329,14.8329954385046,5.6838409195688,2.39680088414724,2.68952813725088,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0,0,0.29688427812965,0,0,0,0.301445281105245,0,0,0,0,0.884610551949874,0.161766849947409,0.220841518460394,0.484875253135222,0,0.292780797011547,0,0.255457055208591,0.718890747035522,0.599902730993408,0.381210681219194,0,0,0,0,0,0,0,0,0.497627882440372,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0.278047249225598,0.348252166522167,0.205782136407943,0,0,0.51469581422943,2.27330799516474,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0.216138049874694,0.398282546508734,0,0.114248512609729,0,0,0,0,0.0632365371242573,0.147610147979602,0,0,0.296452627087149,0.166845105716094,0,0.674586337154561,0.405720242777006,0.964708639009667,0.50925170356284,0.575392274901621,0.486405680325106,0,0,0.372140947668503,0,0,0,0,0.369506380333209,0,0.162964976442026,0.169745085775188,0,0,0,0,0,0.221464689648775,0,0.491589944147214,0.518054945597687,0.289298117163023,0,7.07077388964322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.162886959353576,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0,0,0.683483523191411,0.412773735926445,1.29636169158798,0.376736914009382,0.410082683163076,1.83022538565218,0.509935289981566,0.839708713941948,0.414599921413271,0,0,0,0,0,0,0,0.0826534557253359,0.26175594198403,0.129614973291793,0,0,0,0.165458490457098,0,0,0.337912250981556,0,0,0,0,0,1.26404448251271,0.405450430580328,1.43795340030758,1.42912905275575,0.716106782669926,1.98681354781265,1.56254084375959,1.62458479892035,0.706765149637033,0.228620419965,1.31074040677893,0.974578807397524,0.962118416403295,1.16876902181569,0,0,0,0,0,0.187682475451182,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0.183843508450014,0,0,0.64183841918363,0.252697211763798,0,0,0.0936415074698824,0.192075457214608,0.0574354689556133,0,0,0.192909220463705,0,0.147198920134397,0,0,0,0.145346416632329,0.282328141245992,0,0,0.263069711437843,0.271608227691724,0,0.118635018124174,0.0985044823755635,0.409231043169689,0.154936841185966,0.385813221962283,0.249810577937946,0,0,0,0.441182838239031,0.231867835620421
|short_description=p@chr15:78396408..78396426,+
}}
}}

Latest revision as of 14:34, 5 August 2015

Short description:p@chr15:78396408..78396426, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr15:78396408..78396426, +
Coexpression cluster:MCL_coexpression_mm9:1376
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p@chr15:78396408..78396426+

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.17
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E96.20
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.55
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.94
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.24
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E44.11
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E86.99
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.42
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.79
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A43.15
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.97
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H24.17
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.61
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.60
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.61
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I22.37
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.55
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I32.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G87.12
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.62
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G910.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H23.42
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H44.37
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.51
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I94.35
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.69
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C78.55
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E714.83
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D25.68
Mouse Microglia, donor1.CNhs12629.11718-123C82.40
Mouse Microglia, donor2.CNhs12634.11736-123E82.69
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.72
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.27
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.96
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A17.07
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F21.30
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G31.83
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B51.26
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I21.44
thymus, embryo E16.CNhs11002.456-26C51.43
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G41.99
thymus, neonate N02.CNhs11181.1541-43F81.56
thymus, neonate N03.CNhs11137.2104-43C71.62
thymus, neonate N06.CNhs11197.681-26C40.71
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E41.31
thymus, neonate N20.CNhs11186.820-7A20.97
thymus, neonate N25.CNhs11125.1362-25G70.96
thymus, neonate N30.CNhs11132.1393-42G21.17
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
hematopoietic lineage restricted progenitor cell6.80e-3025
hematopoietic cell1.15e-2432
hematopoietic oligopotent progenitor cell1.15e-2432
hematopoietic stem cell1.15e-2432
hematopoietic multipotent progenitor cell1.15e-2432
connective tissue cell1.29e-2146
mesenchymal cell1.29e-2146
myeloid lineage restricted progenitor cell7.23e-1813
motile cell1.74e-1754
myeloid cell9.21e-1716
leukocyte5.88e-1617
nongranular leukocyte5.88e-1617
megakaryocyte-erythroid progenitor cell6.07e-149
common myeloid progenitor1.15e-1319
lymphoid lineage restricted progenitor cell4.29e-1312
lymphocyte6.07e-1213
common lymphoid progenitor6.07e-1213
T cell1.15e-1111
pro-T cell1.15e-1111
somatic stem cell6.46e-1191
multi fate stem cell6.46e-1191
stem cell7.88e-1097
megakaryocyte progenitor cell1.62e-086
megakaryocyte1.62e-086
mature alpha-beta T cell2.61e-089
alpha-beta T cell2.61e-089
immature T cell2.61e-089
mature T cell2.61e-089
immature alpha-beta T cell2.61e-089
bone marrow cell6.26e-083
mesenchymal stem cell of the bone marrow6.26e-083
erythroid lineage cell3.68e-073
erythroblast3.68e-073
erythroid progenitor cell3.68e-073
proerythroblast3.68e-073
CD4-positive, alpha-beta T cell9.69e-078

Uber anatomy
Ontology termp-valuen
hemolymphoid system1.90e-2448
immune system1.90e-2448
hematopoietic system2.45e-2245
blood island2.45e-2245
connective tissue1.29e-2146
bone marrow2.66e-1716
musculoskeletal system7.43e-1232
bone element8.52e-1222
skeletal element8.52e-1222
skeletal system8.52e-1222
lateral plate mesoderm1.30e-0887
hemopoietic organ3.08e-0829
immune organ3.08e-0829
thymus7.98e-0823
neck7.98e-0823
respiratory system epithelium7.98e-0823
hemolymphoid system gland7.98e-0823
pharyngeal epithelium7.98e-0823
thymic region7.98e-0823
pharyngeal gland7.98e-0823
entire pharyngeal arch endoderm7.98e-0823
thymus primordium7.98e-0823
early pharyngeal endoderm7.98e-0823
pharynx2.08e-0724
gland of gut2.08e-0724
upper respiratory tract2.08e-0724
chordate pharynx2.08e-0724
pharyngeal arch system2.08e-0724
pharyngeal region of foregut2.08e-0724
mesoderm9.61e-07120
mesoderm-derived structure9.61e-07120
presumptive mesoderm9.61e-07120

Disease
Ontology termp-valuen
organ system cancer1.40e-126
hematologic cancer3.68e-073
immune system cancer3.68e-073
leukemia3.68e-073
musculoskeletal system cancer5.13e-073
muscle cancer5.13e-073
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr15:78396408..78396426,%2B&oldid=3909915"