FFCP PHASE1:Mm9::chr17:27693450..27693456,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:27693450..27693456,-
|short_description=p@chr17:27693450..27693456,-
|description=CAGE_peak_at_chr17:27693450..27693456,-
|association_with_transcript=NA
...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=155 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:27693450..27693456,- | |||
|description=CAGE_peak_at_chr17:27693450..27693456,- | |||
|id=chr17:27693450..27693456,- | |||
|ontology_enrichment_celltype=CL:0000063!1.66e-17!66;CL:0000988!1.12e-12!32;CL:0002032!1.12e-12!32;CL:0000037!1.12e-12!32;CL:0000566!1.12e-12!32;CL:0000837!1.12e-12!32;CL:0002320!3.38e-12!46;CL:0000134!3.38e-12!46;CL:0000219!1.70e-10!54;CL:0000144!1.46e-09!121;CL:0000012!1.46e-09!121;CL:0002031!5.75e-09!25;CL:0002371!2.34e-08!118;CL:0000548!1.76e-07!115;CL:0000004!1.76e-07!115;CL:0000255!1.76e-07!115;CL:0000066!2.05e-07!25;CL:0000049!2.29e-07!19;CL:0000738!7.28e-07!17;CL:0002087!7.28e-07!17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,5.54e-14,32;CL:0002032,5.54e-14,32;CL:0000037,5.54e-14,32;CL:0000837,5.54e-14,32;CL:0002320,3.34e-13,46;CL:0000134,3.34e-13,46;CL:0000219,5.89e-11,54;CL:0000066,1.23e-09,25;CL:0002031,1.45e-09,25;CL:0000034,6.67e-09,97;CL:0000223,1.37e-08,20;CL:0000542,1.15e-07,13;CL:0000051,1.15e-07,13;CL:0000049,1.28e-07,19;CL:0000738,1.30e-07,17;CL:0002087,1.30e-07,17;CL:0002563,2.23e-07,9;CL:0002251,2.23e-07,9;CL:0000838,2.30e-07,12;CL:0000723,6.82e-07,91;CL:0000048,6.82e-07,91 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!3.38e-12!46;UBERON:0002390!8.14e-09!45;UBERON:0003061!8.14e-09!45;UBERON:0002193!1.48e-08!48;UBERON:0003929!5.80e-08!55;UBERON:0002405!6.41e-08!70;UBERON:0000490!9.26e-08!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.34e-13,46;UBERON:0003929,1.14e-10,55;UBERON:0000490,1.48e-10,66;UBERON:0002390,1.81e-09,45;UBERON:0003061,1.81e-09,45;UBERON:0000072,6.00e-09,27;UBERON:0002193,1.10e-08,48;UBERON:0002405,1.10e-08,48;UBERON:0004177,8.68e-08,29;UBERON:0005057,8.68e-08,29;UBERON:0002370,1.17e-07,23;UBERON:0000974,1.17e-07,23;UBERON:0004807,1.17e-07,23;UBERON:0005058,1.17e-07,23;UBERON:0003351,1.17e-07,23;UBERON:0009113,1.17e-07,23;UBERON:0003295,1.17e-07,23;UBERON:0009722,1.17e-07,23;UBERON:0005562,1.17e-07,23;UBERON:0007690,1.17e-07,23;UBERON:0005911,1.94e-07,69;UBERON:0003350,2.23e-07,9;UBERON:0004808,2.23e-07,9;UBERON:0001277,2.23e-07,9;UBERON:0007811,4.12e-07,36;UBERON:0006562,4.92e-07,24;UBERON:0003408,4.92e-07,24;UBERON:0001557,4.92e-07,24;UBERON:0001042,4.92e-07,24;UBERON:0008814,4.92e-07,24;UBERON:0009145,4.92e-07,24;UBERON:0000153,7.94e-07,43 | |||
|phase1_expression=0.640595388419176,9.07336059862339,9.09998478779072,8.46899791659124,9.01612313903425,8.72972213941827,10.7461814673942,3.74457637980571,43.6445038670167,49.8557441065846,11.1291679346578,9.4131147614497,1.02720437958723,1.74840804837995,0.999329285446988,1.41732687172878,2.09868563438444,1.57731082679119,1.91960207048034,3.39511721438424,0.850432901510698,6.35462087685666,7.83599367416806,0.95995453676044,1.60586496747019,11.4846392823004,7.75371593086335,8.18790684206378,0.950117097281869,1.00812051903972,4.6563407237614,44.4521471421742,40.5942759805816,15.8481681015439,8.66554859253824,6.31691652362271,16.1293791447272,6.27797446105362,7.0320181007142,2.61761871986899,14.1175557127443,8.19654581950135,3.39857247121808,1.25896817975577,1.21652317463417,1.65192076945513,0.782391344348039,0.218025156380447,0.439372365468944,0.388859798148567,0.699932108126813,0,9.56360854529097,4.35217285206807,4.7053131879945,0,0.573066879877513,0,0.202316460859598,0,0.633831403506179,6.43804610931351,1.77858959222228,0.899899717281399,0.988866362566974,1.4209602298922,1.19840044207362,0.768436610643109,0.725827286159344,0.270011876663381,0.210324961351382,0.285650984403804,0,0.979926393719632,1.15014565221884,0,1.10115880999389,0.127687338085188,0,0.131886287730194,0,0,0.279182999001381,0.56276261003168,0.30559649555362,0.294628585473668,0.142371680799103,0.186399445825301,7.64834552665159,6.72586884950391,23.1891590961342,0,33.9985666853875,2.15881276655127,1.29955283489534,3.13618820968135,0.280888840263504,0.170430322578058,0.259786004602869,1.06001872353102,1.26759077799012,0,0,0,10.1750789275271,12.6679932737549,18.704404465547,0.68510327831436,0.517875767294343,0.29688427812965,0.693941307064543,3.65358573974569,2.99800146432876,0.904335843315735,0.352766121407114,0.376999773989026,0,0.144599356919912,0.884610551949874,0,2.20841518460394,1.45462575940567,0,0.292780797011547,0.209446706813455,0.766371165625774,12.1013275750979,13.7977628128484,6.4805815807263,0,0,0,0,0,0,0,0.305518091550949,1.49288364732112,0,0.841767423545896,3.6433724029557,6.20735681970377,3.06105620669094,2.10986744970001,1.29269348387523,3.33095672740609,3.37326208415024,0.776110112217047,3.23351989399263,0.945530400839096,2.28736461413134,0.657587197282725,1.11218899690239,1.0447564995665,1.02891068203972,1.19420560091096,14.7464769335779,10.808612098818,10.7982129770325,0,0.703578179943289,2.16074473753218,0.710234206755631,0.983821158737019,1.07986979021165,0.930135779001631,0,0.583826711835847,0,0,0,0.292399974850665,0.439100230582101,0,0,0,0,0.793351699990633,3.19932375802851,3.25131340604614,1.03093969057675,0.605050573870028,0.889512175379481,0.190225626112559,1.89811624617805,0.658795818896044,0.251335208800269,0.596869416123452,0.19496408711912,0,0.648414149624083,0.398282546508734,3.98302592001472,1.5994791765362,1.1270773567308,2.8511185898344,1.16371492300575,0.911765658574141,0.252946148497029,0.147610147979602,0.156998727841375,0.863780147452604,0.296452627087149,2.16898637430922,0.786235980452812,1.79889689907883,2.02860121388503,1.68824011826692,2.5462585178142,1.43848068725405,1.45921704097532,0.274561413188081,1.43768206527355,0,0.312037673114561,0.252578877947112,0.179397413521912,0.482443521363367,0.739012760666419,1.89491411770485,0.814824882210129,1.86719594352707,1.17345124144251,1.67506257441816,0.952174563544055,0.585400943573396,0.315270288212382,0.664394068946325,0,0.983179888294428,0.518054945597687,0.578596234326046,6.03165135757089,3.80733978673097,0,0,0.160550589987792,0,1.80328439914343,0,0,1.17131623288992,1.29254038639679,1.43381278771531,2.00518806674155,3.96307143104365,1.21443210502468,0,1.97643888973262,0,0.567760340833074,0.890328018336276,0.325773918707152,0,0,1.69946445308487,1.51161778482376,0.377210159511796,0.885905678642318,0.307435147943927,0.258428293168221,0,0,0.316036757935816,0,0,0.680879211507576,4.14140516272013,2.71653235943784,2.35770738534752,1.41872186913819,0.891844088010353,0.987294123612726,1.522324745573,0.938686832254841,1.27099242518292,0.220528398054962,1.6488625294148,0.645857706783622,0.784068024066026,0.954978752025092,0.656563598980245,1.45740418314925,0,2.56306321196779,1.23832120777933,2.03713980106683,0.753473828018764,1.0935538217682,2.51655990527175,15.4680371294408,10.3564074719507,8.29199842826543,0,3.16335993581135,1.62655573701479,0.972048067396211,0.209088296014469,0.436725127492355,0.404593039154462,0,0.26175594198403,0.518459893167171,0,1.12738587736838,1.94371509857172,1.32366792365678,0.972255941720238,1.03327858782185,0.675824501963113,0.352071715937262,0.781226309063701,0.734015410979976,6.28118714147616,3.74439008135225,7.2682557744481,3.04087822935246,3.69759445793378,3.50786222040047,5.01274747868948,4.56967115996909,3.36547258655913,2.51072196196781,3.93769154797776,3.50551310612999,3.32726410951574,3.99577311032985,5.00301576529713,5.02570679380746,0.226730383615211,3.7737612073591,3.49884040776955,1.17519231454855,0.579568782096571,0.187682475451182,0.36630324853453,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,4.77421798887213,3.19219898720825,2.04880326904961,0,0.628839487883947,0.919217542250071,0.44449345560323,0,0.320919209591815,1.76888048234658,0.760437899670719,0.188626341386076,0.655490552289177,0.192075457214608,0.17230640686684,0.952587382566147,0.347652977834566,0.964546102318525,0,0.294397840268795,0.342869252385415,0.887379030796687,0.715308569841963,0.436039249896986,0.376437521661322,0,0.182927972872773,0.526139422875686,0.271608227691724,0,0.355905054372522,0.29551344712669,0,0.929621047115796,0.964533054905707,0.249810577937946,0.701794825336225,0.429742108096597,0.57386499620653,1.10295709559758,0.927471342481686 | |phase1_expression=0.640595388419176,9.07336059862339,9.09998478779072,8.46899791659124,9.01612313903425,8.72972213941827,10.7461814673942,3.74457637980571,43.6445038670167,49.8557441065846,11.1291679346578,9.4131147614497,1.02720437958723,1.74840804837995,0.999329285446988,1.41732687172878,2.09868563438444,1.57731082679119,1.91960207048034,3.39511721438424,0.850432901510698,6.35462087685666,7.83599367416806,0.95995453676044,1.60586496747019,11.4846392823004,7.75371593086335,8.18790684206378,0.950117097281869,1.00812051903972,4.6563407237614,44.4521471421742,40.5942759805816,15.8481681015439,8.66554859253824,6.31691652362271,16.1293791447272,6.27797446105362,7.0320181007142,2.61761871986899,14.1175557127443,8.19654581950135,3.39857247121808,1.25896817975577,1.21652317463417,1.65192076945513,0.782391344348039,0.218025156380447,0.439372365468944,0.388859798148567,0.699932108126813,0,9.56360854529097,4.35217285206807,4.7053131879945,0,0.573066879877513,0,0.202316460859598,0,0.633831403506179,6.43804610931351,1.77858959222228,0.899899717281399,0.988866362566974,1.4209602298922,1.19840044207362,0.768436610643109,0.725827286159344,0.270011876663381,0.210324961351382,0.285650984403804,0,0.979926393719632,1.15014565221884,0,1.10115880999389,0.127687338085188,0,0.131886287730194,0,0,0.279182999001381,0.56276261003168,0.30559649555362,0.294628585473668,0.142371680799103,0.186399445825301,7.64834552665159,6.72586884950391,23.1891590961342,0,33.9985666853875,2.15881276655127,1.29955283489534,3.13618820968135,0.280888840263504,0.170430322578058,0.259786004602869,1.06001872353102,1.26759077799012,0,0,0,10.1750789275271,12.6679932737549,18.704404465547,0.68510327831436,0.517875767294343,0.29688427812965,0.693941307064543,3.65358573974569,2.99800146432876,0.904335843315735,0.352766121407114,0.376999773989026,0,0.144599356919912,0.884610551949874,0,2.20841518460394,1.45462575940567,0,0.292780797011547,0.209446706813455,0.766371165625774,12.1013275750979,13.7977628128484,6.4805815807263,0,0,0,0,0,0,0,0.305518091550949,1.49288364732112,0,0.841767423545896,3.6433724029557,6.20735681970377,3.06105620669094,2.10986744970001,1.29269348387523,3.33095672740609,3.37326208415024,0.776110112217047,3.23351989399263,0.945530400839096,2.28736461413134,0.657587197282725,1.11218899690239,1.0447564995665,1.02891068203972,1.19420560091096,14.7464769335779,10.808612098818,10.7982129770325,0,0.703578179943289,2.16074473753218,0.710234206755631,0.983821158737019,1.07986979021165,0.930135779001631,0,0.583826711835847,0,0,0,0.292399974850665,0.439100230582101,0,0,0,0,0.793351699990633,3.19932375802851,3.25131340604614,1.03093969057675,0.605050573870028,0.889512175379481,0.190225626112559,1.89811624617805,0.658795818896044,0.251335208800269,0.596869416123452,0.19496408711912,0,0.648414149624083,0.398282546508734,3.98302592001472,1.5994791765362,1.1270773567308,2.8511185898344,1.16371492300575,0.911765658574141,0.252946148497029,0.147610147979602,0.156998727841375,0.863780147452604,0.296452627087149,2.16898637430922,0.786235980452812,1.79889689907883,2.02860121388503,1.68824011826692,2.5462585178142,1.43848068725405,1.45921704097532,0.274561413188081,1.43768206527355,0,0.312037673114561,0.252578877947112,0.179397413521912,0.482443521363367,0.739012760666419,1.89491411770485,0.814824882210129,1.86719594352707,1.17345124144251,1.67506257441816,0.952174563544055,0.585400943573396,0.315270288212382,0.664394068946325,0,0.983179888294428,0.518054945597687,0.578596234326046,6.03165135757089,3.80733978673097,0,0,0.160550589987792,0,1.80328439914343,0,0,1.17131623288992,1.29254038639679,1.43381278771531,2.00518806674155,3.96307143104365,1.21443210502468,0,1.97643888973262,0,0.567760340833074,0.890328018336276,0.325773918707152,0,0,1.69946445308487,1.51161778482376,0.377210159511796,0.885905678642318,0.307435147943927,0.258428293168221,0,0,0.316036757935816,0,0,0.680879211507576,4.14140516272013,2.71653235943784,2.35770738534752,1.41872186913819,0.891844088010353,0.987294123612726,1.522324745573,0.938686832254841,1.27099242518292,0.220528398054962,1.6488625294148,0.645857706783622,0.784068024066026,0.954978752025092,0.656563598980245,1.45740418314925,0,2.56306321196779,1.23832120777933,2.03713980106683,0.753473828018764,1.0935538217682,2.51655990527175,15.4680371294408,10.3564074719507,8.29199842826543,0,3.16335993581135,1.62655573701479,0.972048067396211,0.209088296014469,0.436725127492355,0.404593039154462,0,0.26175594198403,0.518459893167171,0,1.12738587736838,1.94371509857172,1.32366792365678,0.972255941720238,1.03327858782185,0.675824501963113,0.352071715937262,0.781226309063701,0.734015410979976,6.28118714147616,3.74439008135225,7.2682557744481,3.04087822935246,3.69759445793378,3.50786222040047,5.01274747868948,4.56967115996909,3.36547258655913,2.51072196196781,3.93769154797776,3.50551310612999,3.32726410951574,3.99577311032985,5.00301576529713,5.02570679380746,0.226730383615211,3.7737612073591,3.49884040776955,1.17519231454855,0.579568782096571,0.187682475451182,0.36630324853453,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,4.77421798887213,3.19219898720825,2.04880326904961,0,0.628839487883947,0.919217542250071,0.44449345560323,0,0.320919209591815,1.76888048234658,0.760437899670719,0.188626341386076,0.655490552289177,0.192075457214608,0.17230640686684,0.952587382566147,0.347652977834566,0.964546102318525,0,0.294397840268795,0.342869252385415,0.887379030796687,0.715308569841963,0.436039249896986,0.376437521661322,0,0.182927972872773,0.526139422875686,0.271608227691724,0,0.355905054372522,0.29551344712669,0,0.929621047115796,0.964533054905707,0.249810577937946,0.701794825336225,0.429742108096597,0.57386499620653,1.10295709559758,0.927471342481686 | ||
|short_description=p@chr17:27693450..27693456,- | |||
}} | }} |
Latest revision as of 12:22, 4 August 2015
Short description: | p@chr17:27693450..27693456, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:27693450..27693456, - |
Coexpression cluster: | MCL_coexpression_mm9:155 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 5.54e-14 | 32 |
hematopoietic oligopotent progenitor cell | 5.54e-14 | 32 |
hematopoietic stem cell | 5.54e-14 | 32 |
hematopoietic multipotent progenitor cell | 5.54e-14 | 32 |
connective tissue cell | 3.34e-13 | 46 |
mesenchymal cell | 3.34e-13 | 46 |
motile cell | 5.89e-11 | 54 |
epithelial cell | 1.23e-09 | 25 |
hematopoietic lineage restricted progenitor cell | 1.45e-09 | 25 |
stem cell | 6.67e-09 | 97 |
endodermal cell | 1.37e-08 | 20 |
lymphocyte | 1.15e-07 | 13 |
common lymphoid progenitor | 1.15e-07 | 13 |
common myeloid progenitor | 1.28e-07 | 19 |
leukocyte | 1.30e-07 | 17 |
nongranular leukocyte | 1.30e-07 | 17 |
intestinal epithelial cell | 2.23e-07 | 9 |
epithelial cell of alimentary canal | 2.23e-07 | 9 |
lymphoid lineage restricted progenitor cell | 2.30e-07 | 12 |
somatic stem cell | 6.82e-07 | 91 |
multi fate stem cell | 6.82e-07 | 91 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 3.34e-13 | 46 |
gut epithelium | 1.14e-10 | 55 |
unilaminar epithelium | 1.48e-10 | 66 |
hematopoietic system | 1.81e-09 | 45 |
blood island | 1.81e-09 | 45 |
segment of respiratory tract | 6.00e-09 | 27 |
hemolymphoid system | 1.10e-08 | 48 |
immune system | 1.10e-08 | 48 |
hemopoietic organ | 8.68e-08 | 29 |
immune organ | 8.68e-08 | 29 |
thymus | 1.17e-07 | 23 |
neck | 1.17e-07 | 23 |
respiratory system epithelium | 1.17e-07 | 23 |
hemolymphoid system gland | 1.17e-07 | 23 |
pharyngeal epithelium | 1.17e-07 | 23 |
thymic region | 1.17e-07 | 23 |
pharyngeal gland | 1.17e-07 | 23 |
entire pharyngeal arch endoderm | 1.17e-07 | 23 |
thymus primordium | 1.17e-07 | 23 |
early pharyngeal endoderm | 1.17e-07 | 23 |
endo-epithelium | 1.94e-07 | 69 |
epithelium of mucosa | 2.23e-07 | 9 |
gastrointestinal system epithelium | 2.23e-07 | 9 |
intestinal epithelium | 2.23e-07 | 9 |
craniocervical region | 4.12e-07 | 36 |
pharynx | 4.92e-07 | 24 |
gland of gut | 4.92e-07 | 24 |
upper respiratory tract | 4.92e-07 | 24 |
chordate pharynx | 4.92e-07 | 24 |
pharyngeal arch system | 4.92e-07 | 24 |
pharyngeal region of foregut | 4.92e-07 | 24 |
anterior region of body | 7.94e-07 | 43 |