FFCP PHASE1:Mm9::chr17:35031631..35031645,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:35031631..35031645,+
|short_description=p5@Zbtb12
|description=CAGE_peak_5_at_Zbtb12_5end
|association_with_transcript=127bp_to_ENSMUST00000052778,NM_1988...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=193736 | |EntrezGene=193736 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q9Z150 | |UniProt=Q9Z150 | ||
|association_with_transcript=127bp_to_ENSMUST00000052778,NM_198886,uc008cea.1_5end | |||
|cluster_id=chr17:35031631..35031645,+ | |||
|description=CAGE_peak_5_at_Zbtb12_5end | |||
|id=chr17:35031631..35031645,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.63e-13!23;CL:0000337!2.63e-13!23;CL:0000540!4.94e-12!33;CL:0000047!4.94e-12!33;CL:0000031!4.94e-12!33;CL:0000404!4.94e-12!33;CL:0000393!1.28e-09!39;CL:0000211!1.28e-09!39;CL:0000221!7.63e-09!44;CL:0000133!7.63e-09!44;CL:0002319!1.85e-08!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.84e-32,23;CL:0000337,1.84e-32,23;CL:0002609,4.05e-26,6;CL:0000540,2.66e-22,33;CL:0000047,2.66e-22,33;CL:0000031,2.66e-22,33;CL:0000404,2.66e-22,33;CL:0000120,3.45e-20,3;CL:0000393,1.07e-18,39;CL:0000211,1.07e-18,39;CL:0002319,7.55e-17,43;CL:0000221,1.94e-16,44;CL:0000133,1.94e-16,44;CL:0002321,7.59e-12,70;CL:0002608,1.21e-09,3;CL:0002613,1.21e-09,3;CL:0000723,2.78e-07,91;CL:0000048,2.78e-07,91;CL:0000034,9.56e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,3.90e-14,34;UBERON:0003528,3.64e-13,29;UBERON:0002791,3.64e-13,29;UBERON:0001893,3.64e-13,29;UBERON:0001017,2.85e-11,73;UBERON:0001016,6.20e-11,75;UBERON:0000956,2.16e-10,21;UBERON:0001869,2.16e-10,21;UBERON:0000203,2.16e-10,21;UBERON:0002780,1.35e-09,39;UBERON:0001890,1.35e-09,39;UBERON:0006240,1.35e-09,39;UBERON:0003080,2.46e-09,40;UBERON:0001049,6.53e-09,52;UBERON:0005068,6.53e-09,52;UBERON:0006241,6.53e-09,52;UBERON:0007135,6.53e-09,52;UBERON:0001954,1.02e-08,7;UBERON:0003022,1.02e-08,7;UBERON:0002421,1.02e-08,7;UBERON:0000349,1.02e-08,7;UBERON:0002600,1.02e-08,7;UBERON:0000073,1.52e-08,54;UBERON:0004121,2.48e-08,95;UBERON:0000924,2.48e-08,95;UBERON:0006601,2.48e-08,95;UBERON:0002616,5.17e-08,46;UBERON:0000955,7.96e-08,47;UBERON:0006238,7.96e-08,47;UBERON:0003056,1.79e-07,49;UBERON:0002346,4.75e-07,64;UBERON:0003075,4.75e-07,64;UBERON:0007284,4.75e-07,64 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0,0,0,0,0.22940928106717,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367093504323363,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,1.61853168687678,4.7609188134483,6.97214543856797,0.338844532069132,0,0,0,0,0,0.768436610643109,1.14058573539325,1.4850653216486,1.47227472945967,0.856952953211411,0.441737081903227,0.734944795289724,2.39613677545591,5.51531271966013,0,0.127687338085188,0.46081959976873,2.76961204233407,4.94033275453012,0.52091337055676,0,0,0.30559649555362,0.589257170947335,0.996601765593721,2.79599168737951,0,0.0755715601067855,0,0,0,0,0,0,0,0,0.779358013808606,0,0.281686839553361,1.28326477414318,0,0,0.216491041011214,0.253359865475099,0,0,0,0,0.173485326766136,0.304465478312141,0.230615497256059,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299581278809645,0,0.753926112677186,0.173824320192276,0,0,0,0.305518091550949,0,0,0,0.390361328888111,0,0.540186389416048,0.452114453507145,0.272145996605311,0,0.0937017245597288,0,0.431135985865684,0,0.351902248327898,0.219195732427575,0,0,0,0.398068533636986,0,0.257347907114715,0,0,0.234526059981096,0.180062061461015,0,0,0,0.465067889500816,0,0,0.16455984991348,0,0,0,0,0.134206418760372,0,1.02904612379284,0,0,0,0.464473343720877,0.257734922644187,0,0.22237804384487,0,0,0,0.251335208800269,0,0,0,0,0.199141273254367,0,0.228497025219458,0,0,0,0.140271639780637,0.0632365371242573,0.147610147979602,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0.568474235311454,0,0.169745085775188,0.469380496577004,0.335012514883631,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0.315508219416257,0.390438744296638,0,0,0,0.283076530788832,0,0,0.395287777946524,0,0,0.534196811001766,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0.388076051348264,0.214337035031592,0.354680467284547,0.535106452806212,0.329098041204242,0,0,0,0,0,0.161464426695906,0.120625849856312,0.238744688006273,0,0,0.18542530201051,0,0.412773735926445,0,0,0,0,0,0,0.138199973804424,0,0.316335993581135,0.203319467126849,0,0.209088296014469,0,0.134864346384821,0.165306911450672,0,0,0,0,0.149516546043979,0.165458490457098,0.388902376688095,0.774958940866387,0.675824501963113,0.117357238645754,0.2604087696879,0.314578033277133,0,0,0,0.810900861160657,0.102710957164827,0.129920822977795,0,0.198681354781265,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0.31136204275253,0.399024873401031,0.512200817262403,0,0.209613162627982,0.183843508450014,0,0.206035057238894,0,0.505394423527595,0,0.565879024158229,0.187283014939765,0.320125762024346,0.287177344778066,0.952587382566147,0.463537303779422,0.192909220463705,1.23625770240992,0,0,0.177475806159338,0.238436189947321,0.145346416632329,0,0.25384382367503,0.182927972872773,0.263069711437843,0,0,0.118635018124174,0.197008964751127,0,0.154936841185966,0.192906610981141,0,0.233931608445408,0,0,0,0.231867835620421 | |phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0,0,0,0,0.22940928106717,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367093504323363,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,1.61853168687678,4.7609188134483,6.97214543856797,0.338844532069132,0,0,0,0,0,0.768436610643109,1.14058573539325,1.4850653216486,1.47227472945967,0.856952953211411,0.441737081903227,0.734944795289724,2.39613677545591,5.51531271966013,0,0.127687338085188,0.46081959976873,2.76961204233407,4.94033275453012,0.52091337055676,0,0,0.30559649555362,0.589257170947335,0.996601765593721,2.79599168737951,0,0.0755715601067855,0,0,0,0,0,0,0,0,0.779358013808606,0,0.281686839553361,1.28326477414318,0,0,0.216491041011214,0.253359865475099,0,0,0,0,0.173485326766136,0.304465478312141,0.230615497256059,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299581278809645,0,0.753926112677186,0.173824320192276,0,0,0,0.305518091550949,0,0,0,0.390361328888111,0,0.540186389416048,0.452114453507145,0.272145996605311,0,0.0937017245597288,0,0.431135985865684,0,0.351902248327898,0.219195732427575,0,0,0,0.398068533636986,0,0.257347907114715,0,0,0.234526059981096,0.180062061461015,0,0,0,0.465067889500816,0,0,0.16455984991348,0,0,0,0,0.134206418760372,0,1.02904612379284,0,0,0,0.464473343720877,0.257734922644187,0,0.22237804384487,0,0,0,0.251335208800269,0,0,0,0,0.199141273254367,0,0.228497025219458,0,0,0,0.140271639780637,0.0632365371242573,0.147610147979602,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0.568474235311454,0,0.169745085775188,0.469380496577004,0.335012514883631,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0.315508219416257,0.390438744296638,0,0,0,0.283076530788832,0,0,0.395287777946524,0,0,0.534196811001766,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0.388076051348264,0.214337035031592,0.354680467284547,0.535106452806212,0.329098041204242,0,0,0,0,0,0.161464426695906,0.120625849856312,0.238744688006273,0,0,0.18542530201051,0,0.412773735926445,0,0,0,0,0,0,0.138199973804424,0,0.316335993581135,0.203319467126849,0,0.209088296014469,0,0.134864346384821,0.165306911450672,0,0,0,0,0.149516546043979,0.165458490457098,0.388902376688095,0.774958940866387,0.675824501963113,0.117357238645754,0.2604087696879,0.314578033277133,0,0,0,0.810900861160657,0.102710957164827,0.129920822977795,0,0.198681354781265,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0.31136204275253,0.399024873401031,0.512200817262403,0,0.209613162627982,0.183843508450014,0,0.206035057238894,0,0.505394423527595,0,0.565879024158229,0.187283014939765,0.320125762024346,0.287177344778066,0.952587382566147,0.463537303779422,0.192909220463705,1.23625770240992,0,0,0.177475806159338,0.238436189947321,0.145346416632329,0,0.25384382367503,0.182927972872773,0.263069711437843,0,0,0.118635018124174,0.197008964751127,0,0.154936841185966,0.192906610981141,0,0.233931608445408,0,0,0,0.231867835620421 | ||
|short_description=p5@Zbtb12 | |||
}} | }} |
Latest revision as of 08:56, 26 September 2015
Short description: | p5@Zbtb12 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Zbtb12_5end |
Coexpression cluster: | NA |
Association with transcript: | 127bp_to_ENSMUST00000052778, NM_198886, uc008cea.1_5end |
EntrezGene: | Zbtb12 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.84e-32 | 23 |
neuroblast (sensu Vertebrata) | 1.84e-32 | 23 |
neuron of cerebral cortex | 4.05e-26 | 6 |
neuron | 2.66e-22 | 33 |
neuronal stem cell | 2.66e-22 | 33 |
neuroblast | 2.66e-22 | 33 |
electrically signaling cell | 2.66e-22 | 33 |
granule cell | 3.45e-20 | 3 |
electrically responsive cell | 1.07e-18 | 39 |
electrically active cell | 1.07e-18 | 39 |
neural cell | 7.55e-17 | 43 |
ectodermal cell | 1.94e-16 | 44 |
neurectodermal cell | 1.94e-16 | 44 |
embryonic cell | 7.59e-12 | 70 |
hippocampal neuron | 1.21e-09 | 3 |
striatum neuron | 1.21e-09 | 3 |
somatic stem cell | 2.78e-07 | 91 |
multi fate stem cell | 2.78e-07 | 91 |
stem cell | 9.56e-07 | 97 |
Ontology term | p-value | n |
---|---|---|
gray matter | 3.90e-14 | 34 |
brain grey matter | 3.64e-13 | 29 |
regional part of telencephalon | 3.64e-13 | 29 |
telencephalon | 3.64e-13 | 29 |
central nervous system | 2.85e-11 | 73 |
nervous system | 6.20e-11 | 75 |
cerebral cortex | 2.16e-10 | 21 |
cerebral hemisphere | 2.16e-10 | 21 |
pallium | 2.16e-10 | 21 |
regional part of forebrain | 1.35e-09 | 39 |
forebrain | 1.35e-09 | 39 |
future forebrain | 1.35e-09 | 39 |
anterior neural tube | 2.46e-09 | 40 |
neural tube | 6.53e-09 | 52 |
neural rod | 6.53e-09 | 52 |
future spinal cord | 6.53e-09 | 52 |
neural keel | 6.53e-09 | 52 |
Ammon's horn | 1.02e-08 | 7 |
lobe parts of cerebral cortex | 1.02e-08 | 7 |
hippocampal formation | 1.02e-08 | 7 |
limbic system | 1.02e-08 | 7 |
limbic lobe | 1.02e-08 | 7 |
regional part of nervous system | 1.52e-08 | 54 |
ectoderm-derived structure | 2.48e-08 | 95 |
ectoderm | 2.48e-08 | 95 |
presumptive ectoderm | 2.48e-08 | 95 |
regional part of brain | 5.17e-08 | 46 |
brain | 7.96e-08 | 47 |
future brain | 7.96e-08 | 47 |
pre-chordal neural plate | 1.79e-07 | 49 |
neurectoderm | 4.75e-07 | 64 |
neural plate | 4.75e-07 | 64 |
presumptive neural plate | 4.75e-07 | 64 |