FFCP PHASE1:Mm9::chr18:60661402..60661426,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr18:60661402..60661426,-
|short_description=p5@2010002N04Rik
|description=CAGE_peak_5_at_2010002N04Rik_5end
|association_with_transcript=210bp_to_ENSMUST00000...") |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=106878 | |EntrezGene=106878 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=64 | |||
|TSSclassifier=NA | |||
|UniProt=Q99PE5,Q3U1M0 | |UniProt=Q99PE5,Q3U1M0 | ||
|association_with_transcript=210bp_to_ENSMUST00000042710,NM_134133,uc008fag.1_5end | |||
|cluster_id=chr18:60661402..60661426,- | |||
|description=CAGE_peak_5_at_2010002N04Rik_5end | |||
|id=chr18:60661402..60661426,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,4.34e-12,19;CL:0000764,8.88e-11,3;CL:0000765,8.88e-11,3;CL:0000038,8.88e-11,3;CL:0000547,8.88e-11,3;CL:0000763,8.63e-09,16;CL:0000988,5.40e-08,32;CL:0002032,5.40e-08,32;CL:0000037,5.40e-08,32;CL:0000837,5.40e-08,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,8.88e-11,3;DOID:0060083,8.88e-11,3;DOID:1240,8.88e-11,3 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.480446541314382,1.39590163055744,0,0,0.500895729946347,0.33575854382378,0.700837921786577,0,0.985521055061667,0.936258105287974,0,0.0797721589953364,0,0,0.666219523631325,1.21485160433896,0,0.157731082679119,0,0.84877930359606,0,0.893618560807968,1.04479915655574,0.159992422793407,0.68822784320151,0.57423196411502,0,0.861884930743556,0.380046838912748,0.252030129759931,1.10865255327652,3.81018404075779,2.46025915033828,15.8481681015439,0.288851619751275,0.166234645358492,0,0.837063261473815,0,0,3.52938892818609,0,0.485510353031154,0.125896817975577,0.101376931219515,0,0,0,0,0,0,0,0.335565212115473,0,0.336093799142464,0,0,0,0,0,0,0.338844532069132,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0,0,0,0,0,0,0,0,0,0,0,0.681535739998656,0.831287161174641,0,0,0,0,0,0,0.421333260395256,0,0,0,1.26759077799012,0,0,0,0.432982082022428,0.506719730950197,0.505524445014783,0.11418387971906,0,0.445326417194474,0.867426633830679,0.913396434936424,1.15307748628029,1.05505848386836,0.470354828542819,0.502666365318702,0,0,0,0.323533699894818,0.220841518460394,0,0,0,0,0.255457055208591,3.11519323715393,0,1.90605340609597,0,0,0,0,0.255715457330331,0.20778804455956,0.162241263067758,0.305518091550949,0.870848794270651,0,0,0.130120442962704,0.229902104433473,0.180062129805349,0,0,0.12811372028485,0,0.258703370739016,0.431135985865684,0.378212160335639,0.351902248327898,0.219195732427575,0.278047249225598,0,0.205782136407943,0.199034266818493,1.40442637462647,1.02939162845886,0.852490498186778,0.414251545071004,0.234526059981096,0.540186184383045,0.23674473558521,0.196764231747404,0.154267112887378,0.232533944750408,0.536546802799238,0.116765342367169,0,0.164167464079095,0.162137619091711,0.292399974850665,0,0.268412837520744,0,0.102904612379284,0.330418782983798,0.528901133327089,0,0.232236671860439,0,0,0.444756087689741,0.570676878337677,0,0.164698954724011,0.251335208800269,0,0,0,0.432276099749388,0.597423819763102,0,0.342745537829186,1.1270773567308,0,0,0.210407459670956,0.316182685621286,0,0,0.123397163921801,0.296452627087149,0.333690211432188,0.589676985339609,1.12431056192427,0.405720242777006,0.72353147925725,0.50925170356284,0.575392274901621,0.324270453550071,0.274561413188081,1.43768206527355,0,0,0,0,0,0.184753190166605,0.189491411770485,0.162964976442026,0.169745085775188,0,0.502518772325447,0.238043640886014,0.585400943573396,0.157635144106191,0.44292937929755,0.478364305972461,0.655453258862952,1.03610989119537,0.289298117163023,1.50791283939272,0,0,0,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0.709700426041343,0.178065603667255,0.651547837414304,0.329940245945071,0,0.485561272309963,0.302323556964751,0,0,0,0,0,0,0,1.05418608574999,1.03135543248187,0,0.18006109403131,0.258717367565509,0.214337035031592,0.177340233642274,0,0,1.2178597964584,0.23467170806371,0,0,0,0.161464426695906,0,0.119372344003136,0,0.291480836629851,0.18542530201051,0.512612642393558,0.206386867963223,0.185194527369712,0.941842285023455,1.0935538217682,0.686334519619568,4.24946074984638,2.79902904647316,2.76399947608848,0.954670618015114,0,0.406638934253697,0.216010681643603,0.418176592028937,0.218362563746178,0.404593039154462,0.41326727862668,0,0.388844919875379,0,0,0.149516546043979,0,0,0,0.337912250981556,0,0,0,0,0.288030006257865,0.316011120628178,0.608175645870493,0.616265742988964,0.129920822977795,0.358053391334963,0.79472541912506,0.480781798079875,0.147689527174577,0.908698049533329,1.06689529317,0.403304740547362,0.487289403698762,0.673482891482306,1.28564592399726,0.226730383615211,0,0.179427713218951,0.335769232728157,0.19318959403219,0,0,0.214368379079066,0,0,0.460325236507177,0,0.171853182343688,0,0,0,0,0.453142408984205,0.51776031175182,0.103787347584177,0.399024873401031,0.170733605754134,0,0.419226325255965,0,0,0,0,0,0,0,0,0.128050304809739,0.114870937911227,0,0,0.192909220463705,0.412085900803307,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0.0941093804153306,0.169229215783353,0,0,0.271608227691724,0,0.118635018124174,0.29551344712669,0.409231043169689,0,0,0.249810577937946,0,0,0.191288332068843,0.220591419119515,0.463735671240843 | |phase1_expression=0.480446541314382,1.39590163055744,0,0,0.500895729946347,0.33575854382378,0.700837921786577,0,0.985521055061667,0.936258105287974,0,0.0797721589953364,0,0,0.666219523631325,1.21485160433896,0,0.157731082679119,0,0.84877930359606,0,0.893618560807968,1.04479915655574,0.159992422793407,0.68822784320151,0.57423196411502,0,0.861884930743556,0.380046838912748,0.252030129759931,1.10865255327652,3.81018404075779,2.46025915033828,15.8481681015439,0.288851619751275,0.166234645358492,0,0.837063261473815,0,0,3.52938892818609,0,0.485510353031154,0.125896817975577,0.101376931219515,0,0,0,0,0,0,0,0.335565212115473,0,0.336093799142464,0,0,0,0,0,0,0.338844532069132,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0,0,0,0,0,0,0,0,0,0,0,0.681535739998656,0.831287161174641,0,0,0,0,0,0,0.421333260395256,0,0,0,1.26759077799012,0,0,0,0.432982082022428,0.506719730950197,0.505524445014783,0.11418387971906,0,0.445326417194474,0.867426633830679,0.913396434936424,1.15307748628029,1.05505848386836,0.470354828542819,0.502666365318702,0,0,0,0.323533699894818,0.220841518460394,0,0,0,0,0.255457055208591,3.11519323715393,0,1.90605340609597,0,0,0,0,0.255715457330331,0.20778804455956,0.162241263067758,0.305518091550949,0.870848794270651,0,0,0.130120442962704,0.229902104433473,0.180062129805349,0,0,0.12811372028485,0,0.258703370739016,0.431135985865684,0.378212160335639,0.351902248327898,0.219195732427575,0.278047249225598,0,0.205782136407943,0.199034266818493,1.40442637462647,1.02939162845886,0.852490498186778,0.414251545071004,0.234526059981096,0.540186184383045,0.23674473558521,0.196764231747404,0.154267112887378,0.232533944750408,0.536546802799238,0.116765342367169,0,0.164167464079095,0.162137619091711,0.292399974850665,0,0.268412837520744,0,0.102904612379284,0.330418782983798,0.528901133327089,0,0.232236671860439,0,0,0.444756087689741,0.570676878337677,0,0.164698954724011,0.251335208800269,0,0,0,0.432276099749388,0.597423819763102,0,0.342745537829186,1.1270773567308,0,0,0.210407459670956,0.316182685621286,0,0,0.123397163921801,0.296452627087149,0.333690211432188,0.589676985339609,1.12431056192427,0.405720242777006,0.72353147925725,0.50925170356284,0.575392274901621,0.324270453550071,0.274561413188081,1.43768206527355,0,0,0,0,0,0.184753190166605,0.189491411770485,0.162964976442026,0.169745085775188,0,0.502518772325447,0.238043640886014,0.585400943573396,0.157635144106191,0.44292937929755,0.478364305972461,0.655453258862952,1.03610989119537,0.289298117163023,1.50791283939272,0,0,0,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0.709700426041343,0.178065603667255,0.651547837414304,0.329940245945071,0,0.485561272309963,0.302323556964751,0,0,0,0,0,0,0,1.05418608574999,1.03135543248187,0,0.18006109403131,0.258717367565509,0.214337035031592,0.177340233642274,0,0,1.2178597964584,0.23467170806371,0,0,0,0.161464426695906,0,0.119372344003136,0,0.291480836629851,0.18542530201051,0.512612642393558,0.206386867963223,0.185194527369712,0.941842285023455,1.0935538217682,0.686334519619568,4.24946074984638,2.79902904647316,2.76399947608848,0.954670618015114,0,0.406638934253697,0.216010681643603,0.418176592028937,0.218362563746178,0.404593039154462,0.41326727862668,0,0.388844919875379,0,0,0.149516546043979,0,0,0,0.337912250981556,0,0,0,0,0.288030006257865,0.316011120628178,0.608175645870493,0.616265742988964,0.129920822977795,0.358053391334963,0.79472541912506,0.480781798079875,0.147689527174577,0.908698049533329,1.06689529317,0.403304740547362,0.487289403698762,0.673482891482306,1.28564592399726,0.226730383615211,0,0.179427713218951,0.335769232728157,0.19318959403219,0,0,0.214368379079066,0,0,0.460325236507177,0,0.171853182343688,0,0,0,0,0.453142408984205,0.51776031175182,0.103787347584177,0.399024873401031,0.170733605754134,0,0.419226325255965,0,0,0,0,0,0,0,0,0.128050304809739,0.114870937911227,0,0,0.192909220463705,0.412085900803307,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0.0941093804153306,0.169229215783353,0,0,0.271608227691724,0,0.118635018124174,0.29551344712669,0.409231043169689,0,0,0.249810577937946,0,0,0.191288332068843,0.220591419119515,0.463735671240843 | ||
|short_description=p5@2010002N04Rik | |||
}} | }} |
Latest revision as of 13:07, 1 October 2015
Short description: | p5@2010002N04Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_2010002N04Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:64 |
Association with transcript: | 210bp_to_ENSMUST00000042710, NM_134133, uc008fag.1_5end |
EntrezGene: | 2010002N04Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 4.34e-12 | 19 |
erythroid lineage cell | 8.88e-11 | 3 |
erythroblast | 8.88e-11 | 3 |
erythroid progenitor cell | 8.88e-11 | 3 |
proerythroblast | 8.88e-11 | 3 |
myeloid cell | 8.63e-09 | 16 |
hematopoietic cell | 5.40e-08 | 32 |
hematopoietic oligopotent progenitor cell | 5.40e-08 | 32 |
hematopoietic stem cell | 5.40e-08 | 32 |
hematopoietic multipotent progenitor cell | 5.40e-08 | 32 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 8.88e-11 | 3 |
immune system cancer | 8.88e-11 | 3 |
leukemia | 8.88e-11 | 3 |