FFCP PHASE1:Mm9::chr1:112873900..112873909,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:112873900..112873909,-
|short_description=p3@Cdh19
|description=CAGE_peak_3_at_Cdh19_5end
|association_with_transcript=39bp_to_ENSMUST00000094626,NM_001081...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=227485 | |EntrezGene=227485 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=112 | |||
|TSSclassifier=NA | |||
|UniProt=E9Q3A7,B2RXP4 | |UniProt=E9Q3A7,B2RXP4 | ||
|association_with_transcript=39bp_to_ENSMUST00000094626,NM_001081386,uc007chx.1_5end | |||
|cluster_id=chr1:112873900..112873909,- | |||
|description=CAGE_peak_3_at_Cdh19_5end | |||
|id=chr1:112873900..112873909,- | |||
|ontology_enrichment_celltype=CL:0000107!2.57e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,2.46e-34,9;CL:0000217,2.49e-14,2;CL:0000328,2.49e-14,2;CL:0002573,2.49e-14,2;CL:0002376,2.49e-14,2;CL:0000218,2.49e-14,2;CL:0000692,2.49e-14,2;CL:0002377,2.49e-14,2;CL:0002375,2.49e-14,2;CL:0002319,2.81e-11,43;CL:0000221,5.34e-11,44;CL:0000133,5.34e-11,44;CL:0000215,7.42e-10,3;CL:0000540,5.33e-09,33;CL:0000047,5.33e-09,33;CL:0000031,5.33e-09,33;CL:0000404,5.33e-09,33;CL:0000393,1.60e-07,39;CL:0000211,1.60e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000010!3.71e-09!11;UBERON:0004121!2.12e-08!102;UBERON:0000924!2.12e-08!102;UBERON:0006601!2.12e-08!102;UBERON:0002410!2.57e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,1.36e-46,11;UBERON:0002410,2.46e-34,9;UBERON:0000011,2.98e-20,3;UBERON:0000013,9.63e-20,3;UBERON:0001016,4.26e-09,75;UBERON:0001255,2.05e-07,1;UBERON:0001556,2.05e-07,1;UBERON:0000998,3.16e-07,1;UBERON:0007194,3.16e-07,1;UBERON:0006868,3.16e-07,1;UBERON:0004121,6.77e-07,95;UBERON:0000924,6.77e-07,95;UBERON:0006601,6.77e-07,95 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,4.39211921332468,16.3990285431725,0,0,0,0,0,0,0,0,0,0,0.985903938436763,0,0,0,0,0,0,0,0,0.593768556259299,0.173485326766136,0,0.922461989024234,0.904335843315735,1.41106448562846,0.376999773989026,0,0.578397427679647,0,0.161766849947409,0,0,0,0,0.209446706813455,0.255457055208591,0,0,0,0.449371918214468,0.915001205637253,0,0.347648640384553,0.511430914660661,0.20778804455956,0.324482526135515,0.203678727700633,0.124406970610093,0,0.210441855886474,0.130120442962704,0,0.180062129805349,0.30140963567143,0.272145996605311,0.12811372028485,0.0937017245597288,0.258703370739016,0,0.189106080167819,0,0.219195732427575,0.556094498451196,0,0,0,0,0,0,0.207125772535502,0,0.180062061461015,0,0,0.154267112887378,0,0,0.233530684734339,0,0.164167464079095,0.405344047729279,0.292399974850665,0.439100230582101,0.671032093801859,0.420579897128254,0,0,0,0.853153002140936,0.928946687441754,0,0.403367049246685,0.22237804384487,0,0,0.164698954724011,0,0.397912944082302,0.38992817423824,0,0.432276099749388,0,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0.123397163921801,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0.335012514883631,0.238043640886014,0.390267295715598,0,0,0.159454768657487,0.491589944147214,0.172684981865896,0,0,0,0,0,0.963303539926752,1.05490517932983,0,0.252470927204373,0.94652465824877,0,1.29254038639679,2.62865677747807,5.12436950389506,3.39691836946599,1.61924280669958,2.92255857911312,1.58115111178609,0.642642632843614,0.141940085208269,0.178065603667255,0.162886959353576,0.164970122972535,0,0,0.302323556964751,0,0,0,0.258428293168221,0.363533729477506,0.356497378384721,0.632073515871632,0,0,0.340439605753788,0.36012218806262,0,0.214337035031592,0.532020700926821,0,0.329098041204242,0,0,0,0.220528398054962,0.65954501176592,0.484393280087717,0.241251699712623,0.477489376012546,0.164140899745061,0.582961673259701,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0.216010681643603,0,0.655087691238533,0.269728692769641,0.247960367176008,0.523511883968059,0.388844919875379,0.621339313086926,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0.906921534460845,0,0,0,1.15913756419314,0,0,0.643105137237198,1.00314420807073,0,0.460325236507177,0,0.171853182343688,0,0.755393897389701,0,0,0.453142408984205,0,0.103787347584177,0,0,0,0,0,0.222246727801615,0,0,0,0.25347929989024,0.565879024158229,0.0936415074698824,0.256100609619477,0.114870937911227,0.476293691283074,0.231768651889711,0,0,0,0.342869252385415,0,0.476872379894642,0,0.0941093804153306,0.338458431566706,0,0,0,0,0.237270036248348,0,0,0.619747364743864,0.192906610981141,0,0.233931608445408,0,0.382576664137687,0.661774257358546,0.463735671240843 | |phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,4.39211921332468,16.3990285431725,0,0,0,0,0,0,0,0,0,0,0.985903938436763,0,0,0,0,0,0,0,0,0.593768556259299,0.173485326766136,0,0.922461989024234,0.904335843315735,1.41106448562846,0.376999773989026,0,0.578397427679647,0,0.161766849947409,0,0,0,0,0.209446706813455,0.255457055208591,0,0,0,0.449371918214468,0.915001205637253,0,0.347648640384553,0.511430914660661,0.20778804455956,0.324482526135515,0.203678727700633,0.124406970610093,0,0.210441855886474,0.130120442962704,0,0.180062129805349,0.30140963567143,0.272145996605311,0.12811372028485,0.0937017245597288,0.258703370739016,0,0.189106080167819,0,0.219195732427575,0.556094498451196,0,0,0,0,0,0,0.207125772535502,0,0.180062061461015,0,0,0.154267112887378,0,0,0.233530684734339,0,0.164167464079095,0.405344047729279,0.292399974850665,0.439100230582101,0.671032093801859,0.420579897128254,0,0,0,0.853153002140936,0.928946687441754,0,0.403367049246685,0.22237804384487,0,0,0.164698954724011,0,0.397912944082302,0.38992817423824,0,0.432276099749388,0,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0.123397163921801,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0.335012514883631,0.238043640886014,0.390267295715598,0,0,0.159454768657487,0.491589944147214,0.172684981865896,0,0,0,0,0,0.963303539926752,1.05490517932983,0,0.252470927204373,0.94652465824877,0,1.29254038639679,2.62865677747807,5.12436950389506,3.39691836946599,1.61924280669958,2.92255857911312,1.58115111178609,0.642642632843614,0.141940085208269,0.178065603667255,0.162886959353576,0.164970122972535,0,0,0.302323556964751,0,0,0,0.258428293168221,0.363533729477506,0.356497378384721,0.632073515871632,0,0,0.340439605753788,0.36012218806262,0,0.214337035031592,0.532020700926821,0,0.329098041204242,0,0,0,0.220528398054962,0.65954501176592,0.484393280087717,0.241251699712623,0.477489376012546,0.164140899745061,0.582961673259701,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0.216010681643603,0,0.655087691238533,0.269728692769641,0.247960367176008,0.523511883968059,0.388844919875379,0.621339313086926,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0.906921534460845,0,0,0,1.15913756419314,0,0,0.643105137237198,1.00314420807073,0,0.460325236507177,0,0.171853182343688,0,0.755393897389701,0,0,0.453142408984205,0,0.103787347584177,0,0,0,0,0,0.222246727801615,0,0,0,0.25347929989024,0.565879024158229,0.0936415074698824,0.256100609619477,0.114870937911227,0.476293691283074,0.231768651889711,0,0,0,0.342869252385415,0,0.476872379894642,0,0.0941093804153306,0.338458431566706,0,0,0,0,0.237270036248348,0,0,0.619747364743864,0.192906610981141,0,0.233931608445408,0,0.382576664137687,0.661774257358546,0.463735671240843 | ||
|short_description=p3@Cdh19 | |||
}} | }} |
Latest revision as of 06:01, 26 September 2015
Short description: | p3@Cdh19 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Cdh19_5end |
Coexpression cluster: | MCL_coexpression_mm9:112 |
Association with transcript: | 39bp_to_ENSMUST00000094626, NM_001081386, uc007chx.1_5end |
EntrezGene: | Cdh19 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 2.46e-34 | 9 |
insulating cell | 2.49e-14 | 2 |
myelin accumulating cell | 2.49e-14 | 2 |
Schwann cell | 2.49e-14 | 2 |
non-myelinating Schwann cell | 2.49e-14 | 2 |
myelinating Schwann cell;;Schwann cell | 2.49e-14 | 2 |
terminal Schwann cell | 2.49e-14 | 2 |
immature Schwann cell | 2.49e-14 | 2 |
Schwann cell precursor | 2.49e-14 | 2 |
neural cell | 2.81e-11 | 43 |
ectodermal cell | 5.34e-11 | 44 |
neurectodermal cell | 5.34e-11 | 44 |
barrier cell | 7.42e-10 | 3 |
neuron | 5.33e-09 | 33 |
neuronal stem cell | 5.33e-09 | 33 |
neuroblast | 5.33e-09 | 33 |
electrically signaling cell | 5.33e-09 | 33 |
electrically responsive cell | 1.60e-07 | 39 |
electrically active cell | 1.60e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 1.36e-46 | 11 |
autonomic nervous system | 2.46e-34 | 9 |
parasympathetic nervous system | 2.98e-20 | 3 |
sympathetic nervous system | 9.63e-20 | 3 |
nervous system | 4.26e-09 | 75 |
urinary bladder | 2.05e-07 | 1 |
lower urinary tract | 2.05e-07 | 1 |
seminal vesicle | 3.16e-07 | 1 |
vesicular gland | 3.16e-07 | 1 |
seminal fluid secreting gland | 3.16e-07 | 1 |
ectoderm-derived structure | 6.77e-07 | 95 |
ectoderm | 6.77e-07 | 95 |
presumptive ectoderm | 6.77e-07 | 95 |