FFCP PHASE1:Mm9::chr2:31101589..31101640,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:31101589..31101640,+
|short_description=p2@Ncs1
|description=CAGE_peak_2_at_Ncs1_5end
|association_with_transcript=-45bp_to_ENSMUST00000150670_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=14299 | |EntrezGene=14299 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=20 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-45bp_to_ENSMUST00000150670_5end | |||
|cluster_id=chr2:31101589..31101640,+ | |||
|description=CAGE_peak_2_at_Ncs1_5end | |||
|id=chr2:31101589..31101640,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.29e-17!50;CL:0002319!4.46e-17!43;CL:0000221!1.23e-16!44;CL:0000133!1.23e-16!44;CL:0000117!3.38e-13!23;CL:0000337!3.38e-13!23;CL:0000393!4.17e-13!39;CL:0000211!4.17e-13!39;CL:0000540!5.34e-12!33;CL:0000047!5.34e-12!33;CL:0000031!5.34e-12!33;CL:0000404!5.34e-12!33;CL:0002321!5.28e-07!70;CL:0000220!5.28e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,4.63e-23,43;CL:0000221,2.28e-22,44;CL:0000133,2.28e-22,44;CL:0000117,1.31e-19,23;CL:0000337,1.31e-19,23;CL:0000393,1.03e-13,39;CL:0000211,1.03e-13,39;CL:0000540,1.04e-13,33;CL:0000047,1.04e-13,33;CL:0000031,1.04e-13,33;CL:0000404,1.04e-13,33;CL:0002321,1.20e-13,70;CL:0002453,1.44e-11,8;CL:0000333,3.40e-11,10;CL:0000095,3.40e-11,10;CL:0000243,3.40e-11,10;CL:0000123,3.40e-11,10;CL:0000125,3.40e-11,10;CL:0000030,3.40e-11,10;CL:0000339,3.40e-11,10;CL:0000128,2.79e-09,6;CL:0000126,2.79e-09,6;CL:0000127,2.79e-09,6;CL:0002610,4.37e-07,3;CL:0002614,7.35e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.90e-23!75;UBERON:0001016!2.90e-23!75;UBERON:0001017!2.48e-22!73;UBERON:0005743!2.48e-22!73;UBERON:0004121!2.98e-19!102;UBERON:0000924!2.98e-19!102;UBERON:0006601!2.98e-19!102;UBERON:0001049!6.49e-16!52;UBERON:0005068!6.49e-16!52;UBERON:0006241!6.49e-16!52;UBERON:0007135!6.49e-16!52;UBERON:0000955!8.31e-15!50;UBERON:0006238!8.31e-15!50;UBERON:0002346!8.64e-15!71;UBERON:0003075!8.64e-15!71;UBERON:0007284!8.64e-15!71;UBERON:0002616!2.90e-14!49;UBERON:0002020!1.23e-12!34;UBERON:0000033!1.38e-11!63;UBERON:0002791!1.09e-09!29;UBERON:0003528!1.09e-09!29;UBERON:0001893!1.09e-09!29;UBERON:0003080!4.93e-09!40;UBERON:0003076!7.44e-09!12;UBERON:0003057!7.44e-09!12;UBERON:0002780!1.83e-08!39;UBERON:0001890!1.83e-08!39;UBERON:0006240!1.83e-08!39;UBERON:0003056!3.03e-08!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.02e-34,75;UBERON:0001017,3.47e-34,73;UBERON:0000073,1.47e-27,54;UBERON:0004121,3.87e-25,95;UBERON:0000924,3.87e-25,95;UBERON:0006601,3.87e-25,95;UBERON:0001049,1.73e-24,52;UBERON:0005068,1.73e-24,52;UBERON:0006241,1.73e-24,52;UBERON:0007135,1.73e-24,52;UBERON:0003076,5.72e-20,12;UBERON:0003057,5.72e-20,12;UBERON:0002346,2.42e-18,64;UBERON:0003075,2.42e-18,64;UBERON:0007284,2.42e-18,64;UBERON:0000955,7.68e-18,47;UBERON:0006238,7.68e-18,47;UBERON:0002616,9.55e-17,46;UBERON:0002020,3.34e-16,34;UBERON:0010371,4.46e-15,73;UBERON:0010314,2.98e-12,92;UBERON:0002240,5.38e-11,6;UBERON:0005174,5.38e-11,6;UBERON:0001137,5.38e-11,6;UBERON:0004733,1.77e-10,6;UBERON:0004732,1.77e-10,6;UBERON:0002028,1.77e-10,6;UBERON:0007277,1.77e-10,6;UBERON:0003528,2.79e-10,29;UBERON:0002791,2.79e-10,29;UBERON:0001893,2.79e-10,29;UBERON:0003080,2.81e-10,40;UBERON:0002780,3.25e-09,39;UBERON:0001890,3.25e-09,39;UBERON:0006240,3.25e-09,39;UBERON:0001948,3.65e-09,5;UBERON:0002315,3.65e-09,5;UBERON:0002950,1.30e-08,4;UBERON:0001891,1.30e-08,4;UBERON:0009616,1.30e-08,4;UBERON:0010286,1.30e-08,4;UBERON:0002420,2.49e-08,8;UBERON:0007245,2.49e-08,8;UBERON:0010009,2.49e-08,8;UBERON:0010011,2.49e-08,8;UBERON:0000454,2.49e-08,8;UBERON:0000025,2.60e-08,114;UBERON:0004111,7.00e-08,122;UBERON:0003056,1.48e-07,49;UBERON:0011216,1.83e-07,194;UBERON:0004684,4.37e-07,3;UBERON:0002275,4.37e-07,3;UBERON:0002037,6.11e-07,4;UBERON:0002680,6.11e-07,4;UBERON:0001895,6.11e-07,4;UBERON:0010092,6.11e-07,4;UBERON:0006215,6.11e-07,4;UBERON:0002038,7.35e-07,3;UBERON:0009663,7.35e-07,3;UBERON:0009661,7.35e-07,3;UBERON:0000125,7.35e-07,3;UBERON:0002308,7.35e-07,3 | |||
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| ||
|short_description=p2@Ncs1 | |||
}} | }} |
Latest revision as of 13:37, 26 September 2015
Short description: | p2@Ncs1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ncs1_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | -45bp_to_ENSMUST00000150670_5end |
EntrezGene: | Ncs1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 4.63e-23 | 43 |
ectodermal cell | 2.28e-22 | 44 |
neurectodermal cell | 2.28e-22 | 44 |
CNS neuron (sensu Vertebrata) | 1.31e-19 | 23 |
neuroblast (sensu Vertebrata) | 1.31e-19 | 23 |
electrically responsive cell | 1.03e-13 | 39 |
electrically active cell | 1.03e-13 | 39 |
neuron | 1.04e-13 | 33 |
neuronal stem cell | 1.04e-13 | 33 |
neuroblast | 1.04e-13 | 33 |
electrically signaling cell | 1.04e-13 | 33 |
embryonic cell | 1.20e-13 | 70 |
oligodendrocyte precursor cell | 1.44e-11 | 8 |
migratory neural crest cell | 3.40e-11 | 10 |
neuron associated cell | 3.40e-11 | 10 |
glial cell (sensu Vertebrata) | 3.40e-11 | 10 |
neuron associated cell (sensu Vertebrata) | 3.40e-11 | 10 |
glial cell | 3.40e-11 | 10 |
glioblast | 3.40e-11 | 10 |
glioblast (sensu Vertebrata) | 3.40e-11 | 10 |
oligodendrocyte | 2.79e-09 | 6 |
macroglial cell | 2.79e-09 | 6 |
astrocyte | 2.79e-09 | 6 |
raphe nuclei neuron | 4.37e-07 | 3 |
neuron of the substantia nigra | 7.35e-07 | 3 |