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FFCP PHASE1:Mm9::chr2:37278526..37278575,-: Difference between revisions

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(Created page with "{{FFCP |id=chr2:37278526..37278575,- |short_description=p2@Rc3h2 |description=CAGE_peak_2_at_Rc3h2_5end |association_with_transcript=-103bp_to_ENSMUST00000112934,NM_001100...")
 
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{{FFCP
{{FFCP
|id=chr2:37278526..37278575,-
|DHSsupport=NA
|short_description=p2@Rc3h2
|DPIdataset=NA
|description=CAGE_peak_2_at_Rc3h2_5end
|association_with_transcript=-103bp_to_ENSMUST00000112934,NM_001100591,uc008jmq.1,uc008jmr.1_5end
|EntrezGene=319817
|EntrezGene=319817
|HGNC=
|HGNC=
|MCL_coexpression_id=60
|TSSclassifier=NA
|UniProt=A2AVP4,P0C090,Q148V4,Q148V5
|UniProt=A2AVP4,P0C090,Q148V4,Q148V5
|association_with_transcript=-103bp_to_ENSMUST00000112934,NM_001100591,uc008jmq.1,uc008jmr.1_5end
|cluster_id=chr2:37278526..37278575,-
|description=CAGE_peak_2_at_Rc3h2_5end
|id=chr2:37278526..37278575,-
|ontology_enrichment_celltype=CL:0000117!2.34e-07!23;CL:0000337!2.34e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000117,2.26e-07,23;CL:0000337,2.26e-07,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000153!4.44e-17!94;UBERON:0007811!6.53e-17!86;UBERON:0000033!7.00e-17!63;UBERON:0000955!6.40e-15!50;UBERON:0006238!6.40e-15!50;UBERON:0003056!7.42e-15!49;UBERON:0001049!9.11e-15!52;UBERON:0005068!9.11e-15!52;UBERON:0006241!9.11e-15!52;UBERON:0007135!9.11e-15!52;UBERON:0002616!2.56e-14!49;UBERON:0001017!6.05e-13!73;UBERON:0005743!6.05e-13!73;UBERON:0002346!1.05e-12!71;UBERON:0003075!1.05e-12!71;UBERON:0007284!1.05e-12!71;UBERON:0003080!1.18e-12!40;UBERON:0002020!1.63e-12!34;UBERON:0000073!1.95e-12!75;UBERON:0001016!1.95e-12!75;UBERON:0002780!4.09e-12!39;UBERON:0001890!4.09e-12!39;UBERON:0006240!4.09e-12!39;UBERON:0004121!6.47e-12!102;UBERON:0000924!6.47e-12!102;UBERON:0006601!6.47e-12!102;UBERON:0002791!1.20e-11!29;UBERON:0003528!1.20e-11!29;UBERON:0001893!1.20e-11!29;UBERON:0000956!1.83e-08!21;UBERON:0001869!1.83e-08!21;UBERON:0000203!1.83e-08!21;UBERON:0002021!4.47e-08!10;UBERON:0000411!4.47e-08!10;UBERON:0001950!4.47e-08!10;UBERON:0002619!5.23e-07!17;UBERON:0000477!1.00e-06!154
|ontology_enrichment_uberon_v019_2=UBERON:0010371,5.85e-17,73;UBERON:0002346,3.74e-16,64;UBERON:0003075,3.74e-16,64;UBERON:0007284,3.74e-16,64;UBERON:0000073,2.54e-15,54;UBERON:0003056,8.82e-15,49;UBERON:0001049,1.03e-14,52;UBERON:0005068,1.03e-14,52;UBERON:0006241,1.03e-14,52;UBERON:0007135,1.03e-14,52;UBERON:0004121,1.42e-14,95;UBERON:0000924,1.42e-14,95;UBERON:0006601,1.42e-14,95;UBERON:0000955,9.95e-14,47;UBERON:0006238,9.95e-14,47;UBERON:0002616,3.89e-13,46;UBERON:0001017,5.90e-13,73;UBERON:0010314,8.27e-13,92;UBERON:0003080,1.42e-12,40;UBERON:0001016,1.90e-12,75;UBERON:0002020,2.01e-12,34;UBERON:0002780,4.93e-12,39;UBERON:0001890,4.93e-12,39;UBERON:0006240,4.93e-12,39;UBERON:0003528,1.49e-11,29;UBERON:0002791,1.49e-11,29;UBERON:0001893,1.49e-11,29;UBERON:0000956,2.30e-08,21;UBERON:0001869,2.30e-08,21;UBERON:0000203,2.30e-08,21;UBERON:0002021,4.29e-08,10;UBERON:0000411,4.29e-08,10;UBERON:0001950,4.29e-08,10;UBERON:0002619,6.61e-07,17
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|phase1_expression=5.76535849577258,0.697950815278722,0.454999239389536,0.90739263392049,1.00179145989269,1.84667199103079,0.934450562382103,2.1950964985068,1.12630977721333,0.70219357896598,5.47897498321616,3.58974715479014,3.0816131387617,1.92324885321794,1.33243904726265,2.63217847606774,0,4.25873923233621,5.07323404341233,3.81950686618227,8.92954546586233,1.09220046320974,2.35079810225042,0.639969691173627,0.91763712426868,0.57423196411502,0.86152399231815,0.430942465371778,1.14014051673824,2.52030129759931,1.77384408524244,1.90509202037889,0.61506478758457,0,1.73310971850765,1.66234645358492,1.83752420636132,1.67412652294763,0,2.09409497589519,3.52938892818609,6.83045484958446,1.45653105909346,0.629484089877886,0.405507724878058,0.917733760808408,2.34717403304412,0.436050312760893,0.439372365468944,0.972149495371417,0.279972843250725,0,3.85899993932794,2.17608642603403,2.68875039313971,1.02903774414379,1.14613375975503,0.515672092277442,6.87875966922632,7.40587370980846,3.1691570175309,0,0,0,0,0.7104801149461,0.898800331555214,0.384218305321555,7.05089363697648,3.78016627328734,6.30974884054146,3.14216082844184,2.87129103237098,6.24703075996266,4.98396449294829,3.67687514644008,4.40463523997555,7.53355294702608,6.29786786350598,6.72620067423989,6.40413505216868,4.68822033501084,5.30447698102624,4.50210088025344,6.72312290217964,6.48182888042069,5.97961059356232,10.0655700745662,2.42323818666189,2.41828992341714,4.34796733052517,0.860423876981386,0,0,1.29955283489534,1.79210754838934,1.40444420131752,0.511290967734173,0,1.06001872353102,5.63373679106722,0,2.54805239706646,0,1.29894624606728,0.506719730950197,3.0331466700887,2.2836775943812,3.10725460376606,0.890652834388949,2.25530924795977,1.21786191324856,1.61430848079241,2.71300752994721,2.4693628498498,0.879666139307728,2.71914464507811,1.3013942122792,0,4.52947179852746,3.75430581382669,2.90925151881133,0,9.36898550436951,10.0534419270458,1.02182822083437,0.958520996047362,0,0.889491589511453,9.13722900369418,15.0975198930147,9.29842205635197,16.8609590586508,19.4343747571051,4.98691306942944,11.1946471516753,3.66621709861139,3.4833951770826,5.55990068554084,2.52530227063769,3.77349284591841,6.66716102857071,5.40186389416048,4.67184935290717,6.05524842446818,6.14945857367279,7.77724313845749,4.39795730256327,2.80238390812695,3.78212160335639,5.10258260075452,2.41115305670332,5.00485048606076,4.52727816478817,2.46938563689532,3.98068533636986,0,0.51469581422943,0.568326998791185,3.72826390563903,2.57978665979206,4.68161359798639,5.20838418287463,4.52557733019029,3.70241070929708,3.72054311600653,3.21928081679543,4.43708300995244,5.59503489705834,4.26835406605648,3.72916523910936,3.94739966048397,2.41505126820156,4.16039898157152,12.1968170167194,10.9078889122042,1.32167513193519,0.793351699990633,2.98603550749328,3.0190767341857,5.28356591420583,5.44545516483025,4.22518283305254,1.52180500890047,2.84717436926707,1.4822905925161,2.26201687920243,2.78539060857611,1.75467678407208,0.898819408654221,1.08069024937347,1.39398891278057,1.32767530667157,3.42745537829186,3.38123207019241,2.64746726198909,2.32742984601151,3.36651935473529,2.90888070771584,4.28069429140846,1.09899109488962,1.35736880313981,0.296452627087149,4.17112764290235,3.34150291692445,2.24862112384854,4.46292267054706,2.894125917029,3.31013607315846,3.74004978686054,2.10775794807546,2.47105271869273,2.87536413054709,1.11642284300551,2.18426371180192,1.51547326768267,2.33216637578486,1.4473305640901,2.21703828199926,2.65287976478679,3.42226450528254,3.22515662972857,2.58159273117352,4.18765643604539,5.71304738126433,3.70753930929818,3.78324345854858,3.32197034473162,5.10255259703959,2.13022309130459,2.24490476425664,3.18227928879325,3.01582567878545,1.63171705145613,2.95058563811422,1.10374698521893,5.9403718295483,6.44664276257117,1.80328439914343,4.54447668967871,1.57754109708128,2.73307121007647,3.66219776145758,1.19484398976276,3.7875774594007,6.22768367735431,4.45291771842384,2.04579100537918,2.76701444562566,14.4594592389813,1.84522110770749,1.95872164033981,3.90928702448583,1.64970122972535,1.32745138339963,1.69946445308487,1.209294227859,1.32023555829129,1.18120757152309,2.45948118355142,2.84271122485043,1.81766864738753,2.49548164869305,1.26414703174326,1.05418608574999,1.03135543248187,5.44703369206061,3.24109969256358,1.4229455216103,3.21505552547388,4.78818630834139,5.17269571046005,4.27827453565514,3.34911444026059,2.11204537257339,3.1774810629573,0.661585194164886,4.9465875882444,2.58343082713449,4.70440814439616,5.13301079213487,4.76008609260678,1.45740418314925,7.6024373824309,1.87957968877638,2.47664241555867,2.40752885580625,2.82552685507037,4.37421528707281,5.0331198105435,1.18984900995699,1.53946597556024,1.93479963326193,1.90934123603023,3.95419991976419,3.45643094115643,2.59212817972323,3.76358932826044,1.31017538247707,2.02296519577231,2.23164330458407,1.83229159388821,0.648074866458964,0,17.4744810992099,1.34564891439581,2.15096037594227,1.94451188344048,2.19571699912143,3.37912250981556,3.87278887530988,4.03633593016245,5.7672639434141,10.1465330746923,11.8092302565725,3.79213344753814,2.8381530140623,2.87590680061516,2.98817892848929,5.01274747868948,5.36439657909415,6.61074972359829,5.02144392393563,6.86571859647404,5.48689007915999,5.94874492307359,6.72459377104292,6.83104075646339,6.42822961998629,3.17422537061296,1.99787358036658,1.88399098879899,1.34307693091263,1.54551675225752,0.563047426353546,2.38097111547445,3.00115730710692,2.00628841614145,16.942555278512,16.1113832777512,18.3326564300607,15.6386395932756,24.6629707117431,12.8416962556249,22.2757425076496,15.3109209096235,17.672553950384,22.2636934053283,3.32119512269365,4.38927360741134,3.24393850932855,4.61902762429759,4.61148957781561,4.04455718590031,4.4449345560323,4.94484137373346,3.85103051510178,5.81203587056734,2.78827229879264,4.33840585187975,4.58843386602424,4.8018864303652,5.16919220600519,5.23923060411381,4.40360438590451,4.43691207066522,5.76920261124629,4.12156976376312,5.14303878578123,2.48466128623072,5.24559617884106,2.18019624948493,4.51725025993587,5.753793336634,4.57319932181931,2.89376682581627,3.53090695999241,6.73370725989286,4.27086065247027,4.33419722452479,1.63692417267876,4.02835787083512,4.24394544158511,3.2475375131933,3.97683734357194,2.79332370262788,4.59091996965224,2.42650561031467,1.62307484934295
|short_description=p2@Rc3h2
}}
}}

Latest revision as of 16:23, 26 September 2015

Short description:p2@Rc3h2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Rc3h2_5end
Coexpression cluster:MCL_coexpression_mm9:60
Association with transcript: -103bp_to_ENSMUST00000112934, NM_001100591, uc008jmq.1, uc008jmr.1_5end
EntrezGene:Rc3h2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Rc3h2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.77
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.85
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.93
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.20
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E65.48
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F13.59
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E43.08
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.92
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.63
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A24.26
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A45.07
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A63.82
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A38.93
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.35
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.92
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B91.14
Ileum epithelium, pool2.CNhs13232.10253-104C12.52
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.73
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.67
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.09
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G93.53
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H26.83
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.46
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.63
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.41
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.92
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A23.86
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.69
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C36.88
Mouse Granule cells, donor2.CNhs12357.11731-123E37.41
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D57.05
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.78
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.87
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D26.25
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.98
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F37.53
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.30
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D46.73
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.40
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.69
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.30
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I66.72
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D66.48
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.98
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E110.07
Mouse Schwann, donor1.CNhs12507.11728-123D92.42
Mouse Schwann, donor2.CNhs12573.11746-123F92.42
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.35
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.79
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.40
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.63
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.30
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.03
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.28
accessory axillary lymph node, adult.CNhs10475.1063-29H93.11
adrenal gland, adult.CNhs10508.49-24D70.89
adrenal gland, embryo E14.CNhs11038.406-44C52.26
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I11.61
adrenal gland, embryo E18.CNhs11026.1262-18F52.71
adrenal gland, neonate N00.CNhs11191.1311-23C12.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.88
amnion, adult pregnant day17.5.CNhs10488.583-22A82.72
aorta, adult.CNhs10498.46-23H11.30
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F54.53
bone (os femoris), neonate N16.CNhs11225.1525-43A63.75
bone (os femoris), neonate N20.CNhs11195.1350-25C32.91
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B29.37
cerebellum, neonate N30.CNhs11135.1395-42I210.05
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.96
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.89
corpora quadrigemina, adult.CNhs10501.16-22A49.14
corpus striatum, adult.CNhs10487.19-21D815.10
corpus striatum, neonate N00.CNhs11226.630-43F19.30
cortex, adult.CNhs10473.12-14D516.86
cortex, neonate N30.CNhs11107.1392-42F219.43
diencephalon, adult.CNhs10482.20-12F24.99
diencephalon, neonate N30.CNhs11201.1388-42B211.19
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.67
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.48
epididymis, adult.CNhs10490.58-23B25.56
eyeball, adult.CNhs10484.31-12G42.53
eyeball, embryo E12.CNhs11016.345-16C63.77
eyeball, embryo E14.CNhs10521.399-16E26.67
eyeball, embryo E15.CNhs10593.426-16C95.40
eyeball, embryo E17.CNhs11023.1261-18D44.67
eyeball, neonate N00.CNhs11207.633-15C66.06
eyeball, neonate N01.CNhs11140.1532-43E76.15
eyeball, neonate N02.CNhs11205.1551-44G87.78
eyeball, neonate N16.CNhs11188.777-19A24.40
forelimb, embryo E11.CNhs10596.335-25E22.80
forelimb, embryo E12.CNhs10600.359-14H23.78
forelimb, embryo E13.CNhs10589.384-1E25.10
forelimb, embryo E14.CNhs10577.413-26A82.41
forelimb, embryo E15.CNhs11007.437-20E75.00
forelimb, embryo E17.CNhs10598.1517-43C44.53
forelimb, embryo E18.CNhs11008.1520-43B52.47
gonad, embryo E13.CNhs11044.1564-45I63.98
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E93.73
heart, embryo E12.CNhs11015.353-12F52.58
heart, embryo E13.CNhs11013.376-3I94.68
heart, embryo E14.CNhs10597.403-26D45.21
heart, embryo E15.CNhs11017.431-16C84.53
heart, embryo E16.CNhs11021.457-17C63.70
heart, embryo E17.CNhs11025.479-18E53.72
heart, embryo E18.CNhs11030.1283-20G33.22
heart, neonate N00.CNhs11213.639-21E34.44
heart, neonate N03.CNhs11221.1349-25I25.60
heart, neonate N10.CNhs11118.749-24G14.27
heart, neonate N16.CNhs11209.782-15G13.73
heart, neonate N20.CNhs11127.821-26I63.95
heart, neonate N25.CNhs11196.1351-25D32.42
heart, neonate N30.CNhs11202.1390-42D24.16
hippocampus, adult.CNhs10478.13-16E812.20
hippocampus, neonate N00.CNhs11228.627-43G110.91
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I52.99
intestine, embryo E13.CNhs11010.381-16D53.02
intestine, embryo E15.CNhs10602.976-16D85.28
intestine, embryo E16.CNhs10585.463-22H45.45
intestine, embryo E17.CNhs10582.482-18D34.23
intestine, embryo E18.CNhs10526.1289-20F71.52
intestine, neonate N00.CNhs11126.644-26D12.85
intestine, neonate N01.CNhs11192.1322-23E91.48
intestine, neonate N06.CNhs11102.688-20B82.26
intestine, neonate N07.CNhs11095.720-20F22.79
intestine, neonate N10.CNhs11098.755-23A51.75
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.08
intestine, neonate N30.CNhs11131.1384-42G11.39
kidney, embryo E14.CNhs10606.411-4I91.33
kidney, embryo E15.CNhs10997.434-16F83.43
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I22.65
kidney, embryo E18.CNhs11001.1288-20C72.33
kidney, neonate N00.CNhs11214.646-21G73.37
kidney, neonate N10.CNhs11206.758-6D52.91
kidney, neonate N20.CNhs11113.832-19I14.28
kidney, neonate N25.CNhs11122.1353-25F31.10
kidney, neonate N30.CNhs11203.1385-42H11.36
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F84.17
liver, embryo E13.CNhs10524.378-3H63.34
liver, embryo E14.CNhs10594.409-16E12.25
liver, embryo E15.CNhs10520.433-16D74.46
liver, embryo E16.CNhs10523.462-17F52.89
liver, embryo E17.CNhs10510.481-18A33.31
liver, embryo E18.CNhs10579.499-43G43.74
liver, neonate N00.CNhs11117.641-24F42.11
liver, neonate N03.CNhs11123.1345-25G22.47
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B92.18
liver, neonate N20.CNhs11220.823-25A31.52
liver, neonate N25.CNhs11198.1368-26H12.33
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B12.22
lung, embryo E12.CNhs10522.354-16G22.65
lung, embryo E14.CNhs10604.404-26F83.42
lung, embryo E15.CNhs11020.432-17C53.23
lung, embryo E16.CNhs10998.458-17B62.58
lung, embryo E17.CNhs10605.480-44A64.19
lung, embryo E18.CNhs10583.1287-20I65.71
lung, neonate N00.CNhs11224.640-42C63.71
lung, neonate N06.CNhs11212.683-20E53.78
lung, neonate N07.CNhs11111.715-19A33.32
lung, neonate N10.CNhs11219.750-23E65.10
lung, neonate N20.CNhs11109.822-18A42.13
lung, neonate N25.CNhs11119.1359-25C72.24
lung, neonate N30.CNhs11133.1394-42H23.18
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.63
mammary gland, adult lactating day02.CNhs10480.595-22B62.95
mammary gland, adult pregnant day19.CNhs10476.588-5H21.10
medulla oblongata, adult.CNhs10477.17-12C25.94
medulla oblongata, neonate N30.CNhs11200.1396-42A36.45
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.80
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C24.54
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.73
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.66
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.79
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D96.23
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.45
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.05
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.77
olfactory brain, adult.CNhs10489.18-22I914.46
ovary, adult.CNhs10507.91-2I71.85
ovary, embryo E18.CNhs11040.505-44H71.96
ovary, neonate N00.CNhs11217.1299-22I43.91
oviduct, adult pregnant day01.CNhs10500.988-6G61.65
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F41.70
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E51.32
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I72.46
pancreas, neonate N00.CNhs11105.645-26G92.84
pancreas, neonate N01.CNhs11138.1531-43D71.82
pancreas, neonate N02.CNhs11139.1539-43D82.50
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G85.45
pituitary gland, embryo E12.CNhs11018.346-16E63.24
pituitary gland, embryo E13.CNhs11009.370-44C71.42
pituitary gland, embryo E14.CNhs11037.398-44A53.22
pituitary gland, embryo E15.CNhs10592.427-16B94.79
pituitary gland, embryo E16.CNhs11036.449-43F65.17
pituitary gland, embryo E17.CNhs11039.1265-44F54.28
pituitary gland, neonate N00.CNhs11190.1308-22E93.35
placenta, adult pregnant day10.CNhs10472.539-13I72.11
placenta, adult pregnant day17.CNhs10464.577-18G33.18
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C34.95
skin, neonate N00.CNhs11124.650-25G42.58
skin, neonate N03.CNhs11215.662-22H34.70
skin, neonate N06.CNhs11097.693-20I55.13
skin, neonate N10.CNhs11108.762-6C44.76
small intestine, neonate N16.CNhs11114.790-21I11.46
spinal cord, adult.CNhs10505.24-13C97.60
spleen, adult.CNhs10465.25-2G21.88
spleen, embryo E16.CNhs11035.461-43C12.48
spleen, embryo E18.CNhs11011.1271-21F22.41
spleen, neonate N10.CNhs11116.752-24D12.83
spleen, neonate N20.CNhs11112.824-19H14.37
spleen, neonate N25.CNhs11099.1354-25G35.03
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.19
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.54
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.93
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E33.95
stomach, embryo E15.CNhs10603.1252-16G83.46
stomach, embryo E16.CNhs11022.459-17D42.59
stomach, embryo E17.CNhs11006.1035-18D53.76
stomach, embryo E18.CNhs10999.1286-20C61.31
stomach, neonate N03.CNhs11193.1340-24B82.02
stomach, neonate N07.CNhs11210.718-18A92.23
stomach, neonate N25.CNhs11104.1355-25E41.83
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G517.47
testis, embryo E13.CNhs11031.389-23F51.35
testis, embryo E15.CNhs11034.443-27C52.15
testis, embryo E16.CNhs11033.470-26G51.94
testis, embryo E17.CNhs11029.486-18I52.20
testis, embryo E18.CNhs11027.503-18G53.38
testis, neonate N00.CNhs11189.1300-22B73.87
testis, neonate N07.CNhs11222.726-26I44.04
testis, neonate N10.CNhs11204.763-44D95.77
testis, neonate N20.CNhs11110.839-18H310.15
testis, neonate N30.CNhs11130.1391-42E211.81
thymus, adult.CNhs10471.38-12B53.79
thymus, embryo E14.CNhs11041.402-44I42.84
thymus, embryo E15.CNhs11005.430-45I22.88
thymus, embryo E16.CNhs11002.456-26C52.99
thymus, embryo E17.CNhs10581.478-18C15.01
thymus, embryo E18.CNhs10595.1273-19G45.36
thymus, neonate N02.CNhs11181.1541-43F86.61
thymus, neonate N03.CNhs11137.2104-43C75.02
thymus, neonate N06.CNhs11197.681-26C46.87
thymus, neonate N07.CNhs11211.713-19D35.49
thymus, neonate N10.CNhs11194.748-24E45.95
thymus, neonate N20.CNhs11186.820-7A26.72
thymus, neonate N25.CNhs11125.1362-25G76.83
thymus, neonate N30.CNhs11132.1393-42G26.43
tongue, adult.CNhs10499.32-1B43.17
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.88
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.34
urinary bladder, adult.CNhs10481.879-12E41.55
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E52.38
vagina, adult.CNhs10502.89-27D53.00
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A116.94
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A216.11
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A318.33
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D715.64
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A424.66
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A512.84
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A622.28
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A715.31
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A817.67
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A922.26
whole body, embryo E11.CNhs11014.324-5I83.32
whole body, embryo E12.CNhs10587.857-27C94.39
whole body, embryo E13.CNhs10512.372-23H23.24
whole body, embryo E14.5.CNhs10578.420-27D24.62
whole body, embryo E14.CNhs10519.395-14B14.61
whole body, embryo E16.CNhs10514.453-14F24.04
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.94
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.85
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.81
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.79
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.34
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.59
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.17
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.24
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.40
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.44
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G55.77
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.14
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.48
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.25
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.18
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.52
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G55.75
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.57
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.53
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G56.73
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.27
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.33
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.03
whole body, embryo E17.5.CNhs10513.490-9F94.24
whole body, embryo E17.CNhs10517.475-3I53.25
whole body, embryo E18.CNhs10516.493-3B33.98
whole body, neonate N00.CNhs10525.657-19C22.79
whole body, neonate N01.CNhs10576.659-23C64.59
whole body, neonate N06.CNhs10515.692-21D12.43
whole body, neonate N10.CNhs10518.761-6B41.62





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.26e-0723
neuroblast (sensu Vertebrata)2.26e-0723

Uber anatomy
Ontology termp-valuen
ecto-epithelium5.85e-1773
neurectoderm3.74e-1664
neural plate3.74e-1664
presumptive neural plate3.74e-1664
regional part of nervous system2.54e-1554
pre-chordal neural plate8.82e-1549
neural tube1.03e-1452
neural rod1.03e-1452
future spinal cord1.03e-1452
neural keel1.03e-1452
ectoderm-derived structure1.42e-1495
ectoderm1.42e-1495
presumptive ectoderm1.42e-1495
brain9.95e-1447
future brain9.95e-1447
regional part of brain3.89e-1346
central nervous system5.90e-1373
structure with developmental contribution from neural crest8.27e-1392
anterior neural tube1.42e-1240
nervous system1.90e-1275
gray matter2.01e-1234
regional part of forebrain4.93e-1239
forebrain4.93e-1239
future forebrain4.93e-1239
brain grey matter1.49e-1129
regional part of telencephalon1.49e-1129
telencephalon1.49e-1129
cerebral cortex2.30e-0821
cerebral hemisphere2.30e-0821
pallium2.30e-0821
occipital lobe4.29e-0810
visual cortex4.29e-0810
neocortex4.29e-0810
regional part of cerebral cortex6.61e-0717
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