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FFCP PHASE1:Mm9::chr4:140609575..140609612,-: Difference between revisions

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(Created page with "{{FFCP |id=chr4:140609575..140609612,- |short_description=p2@Crocc |description=CAGE_peak_2_at_Crocc_5end |association_with_transcript=0bp_to_ENSMUST00000040222,NM_172122,...")
 
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{{FFCP
{{FFCP
|id=chr4:140609575..140609612,-
|DHSsupport=NA
|short_description=p2@Crocc
|DPIdataset=NA
|description=CAGE_peak_2_at_Crocc_5end
|association_with_transcript=0bp_to_ENSMUST00000040222,NM_172122,uc008vns.2_5end
|EntrezGene=230872
|EntrezGene=230872
|HGNC=
|HGNC=
|MCL_coexpression_id=16
|TSSclassifier=NA
|UniProt=A2AA80,Q8CJ40
|UniProt=A2AA80,Q8CJ40
|association_with_transcript=0bp_to_ENSMUST00000040222,NM_172122,uc008vns.2_5end
|cluster_id=chr4:140609575..140609612,-
|description=CAGE_peak_2_at_Crocc_5end
|id=chr4:140609575..140609612,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!7.51e-28!63;UBERON:0003056!4.08e-26!49;UBERON:0000955!2.64e-22!50;UBERON:0006238!2.64e-22!50;UBERON:0002616!1.10e-21!49;UBERON:0002346!7.75e-21!71;UBERON:0003075!7.75e-21!71;UBERON:0007284!7.75e-21!71;UBERON:0001049!4.30e-19!52;UBERON:0005068!4.30e-19!52;UBERON:0006241!4.30e-19!52;UBERON:0007135!4.30e-19!52;UBERON:0003080!4.91e-19!40;UBERON:0002780!2.31e-18!39;UBERON:0001890!2.31e-18!39;UBERON:0006240!2.31e-18!39;UBERON:0001017!1.17e-16!73;UBERON:0005743!1.17e-16!73;UBERON:0004121!1.02e-15!102;UBERON:0000924!1.02e-15!102;UBERON:0006601!1.02e-15!102;UBERON:0000073!1.46e-15!75;UBERON:0001016!1.46e-15!75;UBERON:0007811!2.83e-13!86;UBERON:0002791!1.14e-12!29;UBERON:0003528!1.14e-12!29;UBERON:0001893!1.14e-12!29;UBERON:0002020!1.61e-11!34;UBERON:0000153!1.49e-10!94;UBERON:0000956!1.36e-08!21;UBERON:0001869!1.36e-08!21;UBERON:0000203!1.36e-08!21;UBERON:0002619!3.02e-08!17;UBERON:0000970!4.90e-08!9;UBERON:0000019!4.90e-08!9;UBERON:0000047!4.90e-08!9;UBERON:0004088!4.90e-08!9;UBERON:0002104!4.90e-08!9;UBERON:0001456!4.90e-08!9;UBERON:0003072!4.90e-08!9;UBERON:0003071!4.90e-08!9;UBERON:0004128!4.90e-08!9;UBERON:0002021!4.91e-08!10;UBERON:0000411!4.91e-08!10;UBERON:0001950!4.91e-08!10;UBERON:0002113!6.60e-07!14;UBERON:0003918!6.60e-07!14;UBERON:0005095!6.60e-07!14;UBERON:0007687!6.60e-07!14;UBERON:0004111!6.81e-07!122;UBERON:0001444!7.09e-07!11;UBERON:0001894!8.18e-07!10;UBERON:0006222!8.18e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0003056,6.88e-34,49;UBERON:0002346,2.97e-29,64;UBERON:0003075,2.97e-29,64;UBERON:0007284,2.97e-29,64;UBERON:0000955,1.93e-25,47;UBERON:0006238,1.93e-25,47;UBERON:0000073,1.28e-24,54;UBERON:0002616,1.52e-24,46;UBERON:0004121,3.38e-24,95;UBERON:0000924,3.38e-24,95;UBERON:0006601,3.38e-24,95;UBERON:0010371,9.81e-24,73;UBERON:0003080,2.13e-23,40;UBERON:0002780,2.09e-22,39;UBERON:0001890,2.09e-22,39;UBERON:0006240,2.09e-22,39;UBERON:0001049,1.49e-21,52;UBERON:0005068,1.49e-21,52;UBERON:0006241,1.49e-21,52;UBERON:0007135,1.49e-21,52;UBERON:0001017,1.96e-21,73;UBERON:0001016,1.80e-20,75;UBERON:0010314,2.94e-20,92;UBERON:0003528,4.91e-14,29;UBERON:0002791,4.91e-14,29;UBERON:0001893,4.91e-14,29;UBERON:0002020,4.96e-12,34;UBERON:0000970,1.37e-11,9;UBERON:0000019,1.37e-11,9;UBERON:0000047,1.37e-11,9;UBERON:0010312,1.37e-11,9;UBERON:0004088,1.37e-11,9;UBERON:0002104,1.37e-11,9;UBERON:0001456,1.37e-11,9;UBERON:0003072,1.37e-11,9;UBERON:0004128,1.37e-11,9;UBERON:0003071,1.37e-11,9;UBERON:0002021,1.38e-11,10;UBERON:0000411,1.38e-11,10;UBERON:0001950,1.38e-11,10;UBERON:0001894,1.05e-09,10;UBERON:0006222,1.05e-09,10;UBERON:0002619,1.77e-09,17;UBERON:0001444,5.63e-09,11;UBERON:0000956,3.19e-08,21;UBERON:0001869,3.19e-08,21;UBERON:0000203,3.19e-08,21;UBERON:0000020,5.28e-08,12;UBERON:0001032,5.28e-08,12;UBERON:0004456,5.28e-08,12;UBERON:0000025,6.35e-08,114;UBERON:0002113,7.96e-08,14;UBERON:0003918,7.96e-08,14;UBERON:0011143,7.96e-08,14;UBERON:0005095,7.96e-08,14;UBERON:0007687,7.96e-08,14;UBERON:0000007,8.59e-08,8;UBERON:0003296,8.59e-08,8;UBERON:0010133,8.59e-08,8;UBERON:0004111,1.06e-07,122;UBERON:0002420,1.22e-07,8;UBERON:0007245,1.22e-07,8;UBERON:0010009,1.22e-07,8;UBERON:0010011,1.22e-07,8;UBERON:0000454,1.22e-07,8;UBERON:0000033,3.46e-07,13;UBERON:0005085,3.46e-07,13
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.42225108785563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.878744730937887,1.1665793944457,1.25987779462826,0,0,0,0,0,0,0,1.01158230429799,1.5869729378161,0.633831403506179,0,0,0,0,0,3.89480143673926,15.3687322128622,0.207379224616955,0.270011876663381,0.420649922702764,1.42825492201902,0.220868540951614,0.244981598429908,0.383381884072945,0,6.60695285996332,2.68143409978894,1.53606533256243,1.58263545276233,1.73826522844578,2.6045668527838,1.3959149950069,5.06486349028512,3.97275444219706,0,0.569486723196412,0,0,0,0,0,0,0,0,0,1.12355536105401,0,0,0,0.281686839553361,0,0,0,0,0,0,0.5709193985953,0,0.148442139064825,0,0,0,0.150722640552623,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,1.75668478206928,2.09446706813455,0,0,0,0,6.14141621559773,16.0125210986519,6.03140890141749,4.51943232499919,8.43861009190091,3.74018480207208,14.1149898868949,0.81471491080253,1.8661045591514,3.79084137650512,36.8273247801329,8.45782879257574,4.59804208866946,5.22180176435513,10.8507468841715,17.2132342852859,26.0070852178245,34.5759363625399,103.222644924867,0,0.189106080167819,0,0,0,0,0,0.59710280045548,0,0,0,0.207125772535502,0,0.36012412292203,0.710234206755631,0.590292695242212,0.617068451549513,0.232533944750408,0.536546802799238,0.116765342367169,1.31647879930784,1.31333971263276,1.05389452409612,1.60819986167866,1.53685080703735,0.268412837520744,8.83217783969334,2.46971069710283,0,0,0.213288250535234,0.464473343720877,0,0.201683524623343,0.444756087689741,0,0.474529061544512,0.494096864172033,0.251335208800269,0,0,0,0.216138049874694,0.199141273254367,0.948339504765408,2.62771579002376,0,5.29493452397817,6.0125271021964,2.94570443539338,7.65162099203513,12.5468625782662,12.0889020437859,10.8589504251184,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0.195133647857799,0,0,0,0,0,0.289298117163023,0,0,0,0,1.60550589987792,1.87538698547525,0,0.252470927204373,0,0,0,0,0,0,0,0,0,4.17717711348349,1.27746076687442,0.178065603667255,0.162886959353576,10.2281476242972,0,0,0,0,0.295301892880773,0.922305443831782,0.258428293168221,1.09060118843252,0.356497378384721,0.316036757935816,0,0,8.5109901438447,3.24109969256358,2.8458910432206,5.35842587578981,2.12808280370728,4.10248280484762,2.63278432963394,2.13125464380219,0,0,0,0,0,0,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.406638934253697,0.216010681643603,0.627264888043406,0.218362563746178,1.21377911746339,1.23980183588004,0.523511883968059,0.90730481304255,0.621339313086926,0,0,0,0,0,0,0.117357238645754,0.5208175393758,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.40930863290133,1.87682475451182,1.09890974560359,0.428736758158132,1.00314420807073,15.2482997506608,13.8097570952153,10.3121192419091,14.0919609521824,2.74033007908257,11.3309084608455,10.1253375034771,6.30449684513909,4.53142408984205,4.14208249401456,0,0.399024873401031,0.512200817262403,1.21553358534147,0,0.183843508450014,0,0.824140228955577,0.962757628775446,0.505394423527595,1.2673964994512,0.377252682772152,0.561849044819294,0.384150914429216,0.516919220600519,0.476293691283074,0.579421629724277,0.964546102318525,0.824171801606613,0.735994600671987,0.685738504770831,0.354951612318675,0.476872379894642,0.145346416632329,0.188218760830661,0.25384382367503,0.73171189149109,1.31534855718921,0.543216455383447,0,0.711810108745045,0.591026894253381,1.22769312950907,0.309873682371932,0.771626443924566,1.99848462350357,0.701794825336225,1.28922632428979,0,0,0
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.42225108785563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.878744730937887,1.1665793944457,1.25987779462826,0,0,0,0,0,0,0,1.01158230429799,1.5869729378161,0.633831403506179,0,0,0,0,0,3.89480143673926,15.3687322128622,0.207379224616955,0.270011876663381,0.420649922702764,1.42825492201902,0.220868540951614,0.244981598429908,0.383381884072945,0,6.60695285996332,2.68143409978894,1.53606533256243,1.58263545276233,1.73826522844578,2.6045668527838,1.3959149950069,5.06486349028512,3.97275444219706,0,0.569486723196412,0,0,0,0,0,0,0,0,0,1.12355536105401,0,0,0,0.281686839553361,0,0,0,0,0,0,0.5709193985953,0,0.148442139064825,0,0,0,0.150722640552623,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,1.75668478206928,2.09446706813455,0,0,0,0,6.14141621559773,16.0125210986519,6.03140890141749,4.51943232499919,8.43861009190091,3.74018480207208,14.1149898868949,0.81471491080253,1.8661045591514,3.79084137650512,36.8273247801329,8.45782879257574,4.59804208866946,5.22180176435513,10.8507468841715,17.2132342852859,26.0070852178245,34.5759363625399,103.222644924867,0,0.189106080167819,0,0,0,0,0,0.59710280045548,0,0,0,0.207125772535502,0,0.36012412292203,0.710234206755631,0.590292695242212,0.617068451549513,0.232533944750408,0.536546802799238,0.116765342367169,1.31647879930784,1.31333971263276,1.05389452409612,1.60819986167866,1.53685080703735,0.268412837520744,8.83217783969334,2.46971069710283,0,0,0.213288250535234,0.464473343720877,0,0.201683524623343,0.444756087689741,0,0.474529061544512,0.494096864172033,0.251335208800269,0,0,0,0.216138049874694,0.199141273254367,0.948339504765408,2.62771579002376,0,5.29493452397817,6.0125271021964,2.94570443539338,7.65162099203513,12.5468625782662,12.0889020437859,10.8589504251184,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0.195133647857799,0,0,0,0,0,0.289298117163023,0,0,0,0,1.60550589987792,1.87538698547525,0,0.252470927204373,0,0,0,0,0,0,0,0,0,4.17717711348349,1.27746076687442,0.178065603667255,0.162886959353576,10.2281476242972,0,0,0,0,0.295301892880773,0.922305443831782,0.258428293168221,1.09060118843252,0.356497378384721,0.316036757935816,0,0,8.5109901438447,3.24109969256358,2.8458910432206,5.35842587578981,2.12808280370728,4.10248280484762,2.63278432963394,2.13125464380219,0,0,0,0,0,0,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.406638934253697,0.216010681643603,0.627264888043406,0.218362563746178,1.21377911746339,1.23980183588004,0.523511883968059,0.90730481304255,0.621339313086926,0,0,0,0,0,0,0.117357238645754,0.5208175393758,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.40930863290133,1.87682475451182,1.09890974560359,0.428736758158132,1.00314420807073,15.2482997506608,13.8097570952153,10.3121192419091,14.0919609521824,2.74033007908257,11.3309084608455,10.1253375034771,6.30449684513909,4.53142408984205,4.14208249401456,0,0.399024873401031,0.512200817262403,1.21553358534147,0,0.183843508450014,0,0.824140228955577,0.962757628775446,0.505394423527595,1.2673964994512,0.377252682772152,0.561849044819294,0.384150914429216,0.516919220600519,0.476293691283074,0.579421629724277,0.964546102318525,0.824171801606613,0.735994600671987,0.685738504770831,0.354951612318675,0.476872379894642,0.145346416632329,0.188218760830661,0.25384382367503,0.73171189149109,1.31534855718921,0.543216455383447,0,0.711810108745045,0.591026894253381,1.22769312950907,0.309873682371932,0.771626443924566,1.99848462350357,0.701794825336225,1.28922632428979,0,0,0
|short_description=p2@Crocc
}}
}}

Latest revision as of 15:14, 26 September 2015

Short description:p2@Crocc
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Crocc_5end
Coexpression cluster:MCL_coexpression_mm9:16
Association with transcript: 0bp_to_ENSMUST00000040222, NM_172122, uc008vns.2_5end
EntrezGene:Crocc
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Crocc

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.42
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.17
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.26
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C83.89
Mouse Microglia, donor2.CNhs12634.11736-123E815.37
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.38
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.68
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.54
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.58
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.74
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.06
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.97
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.76
cerebellum, neonate N30.CNhs11135.1395-42I22.09
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A46.14
corpus striatum, adult.CNhs10487.19-21D816.01
corpus striatum, neonate N00.CNhs11226.630-43F16.03
cortex, adult.CNhs10473.12-14D54.52
cortex, neonate N30.CNhs11107.1392-42F28.44
diencephalon, adult.CNhs10482.20-12F23.74
diencephalon, neonate N30.CNhs11201.1388-42B214.11
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.81
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.87
epididymis, adult.CNhs10490.58-23B23.79
eyeball, adult.CNhs10484.31-12G436.83
eyeball, embryo E12.CNhs11016.345-16C68.46
eyeball, embryo E14.CNhs10521.399-16E24.60
eyeball, embryo E15.CNhs10593.426-16C95.22
eyeball, embryo E17.CNhs11023.1261-18D410.85
eyeball, neonate N00.CNhs11207.633-15C617.21
eyeball, neonate N01.CNhs11140.1532-43E726.01
eyeball, neonate N02.CNhs11205.1551-44G834.58
eyeball, neonate N16.CNhs11188.777-19A2103.22
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I21.32
heart, neonate N10.CNhs11118.749-24G11.31
heart, neonate N16.CNhs11209.782-15G11.05
heart, neonate N20.CNhs11127.821-26I61.61
heart, neonate N25.CNhs11196.1351-25D31.54
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E88.83
hippocampus, neonate N00.CNhs11228.627-43G12.47
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F82.63
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I25.29
kidney, embryo E18.CNhs11001.1288-20C76.01
kidney, neonate N00.CNhs11214.646-21G72.95
kidney, neonate N10.CNhs11206.758-6D57.65
kidney, neonate N20.CNhs11113.832-19I112.55
kidney, neonate N25.CNhs11122.1353-25F312.09
kidney, neonate N30.CNhs11203.1385-42H110.86
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.61
medulla oblongata, neonate N30.CNhs11200.1396-42A31.88
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I94.18
ovary, adult.CNhs10507.91-2I71.28
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G610.23
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G88.51
pituitary gland, embryo E12.CNhs11018.346-16E63.24
pituitary gland, embryo E13.CNhs11009.370-44C72.85
pituitary gland, embryo E14.CNhs11037.398-44A55.36
pituitary gland, embryo E15.CNhs10592.427-16B92.13
pituitary gland, embryo E16.CNhs11036.449-43F64.10
pituitary gland, embryo E17.CNhs11039.1265-44F52.63
pituitary gland, neonate N00.CNhs11190.1308-22E92.13
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.74
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B81.21
stomach, neonate N07.CNhs11210.718-18A91.24
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.91
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E45.41
uterus, adult pregnant day19.CNhs10497.590-15F51.88
uterus, adult.CNhs10509.92-27E51.10
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A115.25
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A213.81
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A310.31
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D714.09
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A511.33
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A610.13
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A76.30
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.53
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.14
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.52
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I52.00
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
pre-chordal neural plate6.88e-3449
neurectoderm2.97e-2964
neural plate2.97e-2964
presumptive neural plate2.97e-2964
brain1.93e-2547
future brain1.93e-2547
regional part of nervous system1.28e-2454
regional part of brain1.52e-2446
ectoderm-derived structure3.38e-2495
ectoderm3.38e-2495
presumptive ectoderm3.38e-2495
ecto-epithelium9.81e-2473
anterior neural tube2.13e-2340
regional part of forebrain2.09e-2239
forebrain2.09e-2239
future forebrain2.09e-2239
neural tube1.49e-2152
neural rod1.49e-2152
future spinal cord1.49e-2152
neural keel1.49e-2152
central nervous system1.96e-2173
nervous system1.80e-2075
structure with developmental contribution from neural crest2.94e-2092
brain grey matter4.91e-1429
regional part of telencephalon4.91e-1429
telencephalon4.91e-1429
gray matter4.96e-1234
eye1.37e-119
camera-type eye1.37e-119
simple eye1.37e-119
immature eye1.37e-119
ocular region1.37e-119
visual system1.37e-119
face1.37e-119
optic cup1.37e-119
optic vesicle1.37e-119
eye primordium1.37e-119
occipital lobe1.38e-1110
visual cortex1.38e-1110
neocortex1.38e-1110
diencephalon1.05e-0910
future diencephalon1.05e-0910
regional part of cerebral cortex1.77e-0917
subdivision of head5.63e-0911
cerebral cortex3.19e-0821
cerebral hemisphere3.19e-0821
pallium3.19e-0821
sense organ5.28e-0812
sensory system5.28e-0812
entire sense organ system5.28e-0812
tube6.35e-08114
kidney7.96e-0814
kidney mesenchyme7.96e-0814
upper urinary tract7.96e-0814
kidney rudiment7.96e-0814
kidney field7.96e-0814
pituitary gland8.59e-088
gland of diencephalon8.59e-088
neuroendocrine gland8.59e-088
anatomical conduit1.06e-07122
basal ganglion1.22e-078
nuclear complex of neuraxis1.22e-078
aggregate regional part of brain1.22e-078
collection of basal ganglia1.22e-078
cerebral subcortex1.22e-078
head3.46e-0713
ectodermal placode3.46e-0713
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