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FFCP PHASE1:Mm9::chr6:144997121..144997162,-: Difference between revisions

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(Created page with "{{FFCP |id=chr6:144997121..144997162,- |short_description=p5@Bcat1 |description=CAGE_peak_5_at_Bcat1_5end |association_with_transcript=169bp_to_ENSMUST00000087468_5end |E...")
 
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{{FFCP
{{FFCP
|id=chr6:144997121..144997162,-
|DHSsupport=NA
|short_description=p5@Bcat1
|DPIdataset=NA
|description=CAGE_peak_5_at_Bcat1_5end
|association_with_transcript=169bp_to_ENSMUST00000087468_5end
|EntrezGene=12035
|EntrezGene=12035
|HGNC=
|HGNC=
|MCL_coexpression_id=20
|TSSclassifier=NA
|UniProt=F8WIH8
|UniProt=F8WIH8
|association_with_transcript=169bp_to_ENSMUST00000087468_5end
|cluster_id=chr6:144997121..144997162,-
|description=CAGE_peak_5_at_Bcat1_5end
|id=chr6:144997121..144997162,-
|ontology_enrichment_celltype=CL:0000117!4.79e-16!23;CL:0000337!4.79e-16!23;CL:0000540!2.08e-14!33;CL:0000047!2.08e-14!33;CL:0000031!2.08e-14!33;CL:0000404!2.08e-14!33;CL:0000221!5.93e-13!44;CL:0000133!5.93e-13!44;CL:0002319!7.12e-13!43;CL:0000393!3.88e-11!39;CL:0000211!3.88e-11!39;CL:0000055!6.73e-10!50
|ontology_enrichment_celltype_v019_2=CL:0000117,1.19e-25,23;CL:0000337,1.19e-25,23;CL:0000540,7.17e-16,33;CL:0000047,7.17e-16,33;CL:0000031,7.17e-16,33;CL:0000404,7.17e-16,33;CL:0002319,3.81e-14,43;CL:0000221,1.15e-13,44;CL:0000133,1.15e-13,44;CL:0000393,1.87e-12,39;CL:0000211,1.87e-12,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!1.58e-33!71;UBERON:0003075!1.58e-33!71;UBERON:0007284!1.58e-33!71;UBERON:0001017!3.77e-33!73;UBERON:0005743!3.77e-33!73;UBERON:0000033!8.11e-33!63;UBERON:0000073!1.24e-32!75;UBERON:0001016!1.24e-32!75;UBERON:0004121!3.26e-32!102;UBERON:0000924!3.26e-32!102;UBERON:0006601!3.26e-32!102;UBERON:0001049!1.25e-30!52;UBERON:0005068!1.25e-30!52;UBERON:0006241!1.25e-30!52;UBERON:0007135!1.25e-30!52;UBERON:0000955!2.03e-29!50;UBERON:0006238!2.03e-29!50;UBERON:0002616!1.52e-28!49;UBERON:0003056!8.48e-28!49;UBERON:0002020!2.71e-23!34;UBERON:0003080!6.00e-23!40;UBERON:0002780!4.70e-22!39;UBERON:0001890!4.70e-22!39;UBERON:0006240!4.70e-22!39;UBERON:0002791!1.21e-19!29;UBERON:0003528!1.21e-19!29;UBERON:0001893!1.21e-19!29;UBERON:0007811!4.37e-17!86;UBERON:0000153!2.53e-14!94;UBERON:0000956!6.05e-14!21;UBERON:0001869!6.05e-14!21;UBERON:0000203!6.05e-14!21;UBERON:0002619!8.39e-12!17;UBERON:0002021!2.62e-08!10;UBERON:0000411!2.62e-08!10;UBERON:0001950!2.62e-08!10;UBERON:0003076!5.21e-08!12;UBERON:0003057!5.21e-08!12;UBERON:0004111!1.77e-07!122;UBERON:0000025!3.24e-07!114;UBERON:0002420!6.73e-07!8;UBERON:0007245!6.73e-07!8;UBERON:0010009!6.73e-07!8;UBERON:0010011!6.73e-07!8;UBERON:0000454!6.73e-07!8
|ontology_enrichment_uberon_v019_2=UBERON:0002346,4.59e-50,64;UBERON:0003075,4.59e-50,64;UBERON:0007284,4.59e-50,64;UBERON:0000073,6.67e-49,54;UBERON:0001049,1.14e-45,52;UBERON:0005068,1.14e-45,52;UBERON:0006241,1.14e-45,52;UBERON:0007135,1.14e-45,52;UBERON:0001017,1.26e-42,73;UBERON:0010371,3.75e-42,73;UBERON:0004121,1.38e-41,95;UBERON:0000924,1.38e-41,95;UBERON:0006601,1.38e-41,95;UBERON:0001016,4.10e-41,75;UBERON:0000955,9.27e-39,47;UBERON:0006238,9.27e-39,47;UBERON:0002020,9.43e-39,34;UBERON:0003056,1.37e-38,49;UBERON:0002616,2.77e-37,46;UBERON:0003528,3.62e-32,29;UBERON:0002791,3.62e-32,29;UBERON:0001893,3.62e-32,29;UBERON:0003080,1.26e-31,40;UBERON:0010314,1.53e-30,92;UBERON:0002780,4.17e-30,39;UBERON:0001890,4.17e-30,39;UBERON:0006240,4.17e-30,39;UBERON:0000956,6.43e-22,21;UBERON:0001869,6.43e-22,21;UBERON:0000203,6.43e-22,21;UBERON:0002619,4.89e-18,17;UBERON:0000025,4.99e-14,114;UBERON:0003076,8.58e-14,12;UBERON:0003057,8.58e-14,12;UBERON:0002021,9.47e-14,10;UBERON:0000411,9.47e-14,10;UBERON:0001950,9.47e-14,10;UBERON:0004111,2.53e-12,122;UBERON:0002420,3.25e-11,8;UBERON:0007245,3.25e-11,8;UBERON:0010009,3.25e-11,8;UBERON:0010011,3.25e-11,8;UBERON:0000454,3.25e-11,8;UBERON:0000483,1.12e-09,174;UBERON:0000119,2.04e-09,176;UBERON:0002240,4.66e-09,6;UBERON:0005174,4.66e-09,6;UBERON:0001137,4.66e-09,6;UBERON:0001948,1.57e-07,5;UBERON:0002315,1.57e-07,5;UBERON:0002950,1.77e-07,4;UBERON:0001891,1.77e-07,4;UBERON:0009616,1.77e-07,4;UBERON:0010286,1.77e-07,4;UBERON:0011216,1.79e-07,194;UBERON:0000970,2.41e-07,9;UBERON:0000019,2.41e-07,9;UBERON:0000047,2.41e-07,9;UBERON:0010312,2.41e-07,9;UBERON:0004088,2.41e-07,9;UBERON:0002104,2.41e-07,9;UBERON:0001456,2.41e-07,9;UBERON:0003072,2.41e-07,9;UBERON:0004128,2.41e-07,9;UBERON:0003071,2.41e-07,9;UBERON:0000369,7.10e-07,5;UBERON:0002435,7.10e-07,5;UBERON:0000204,7.10e-07,5;UBERON:0010082,7.10e-07,5
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97651515528744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09012578190223,1.09843091367236,1.74986909166855,0.699932108126813,0,0,0,0,0,0,0.515672092277442,5.46254444320914,4.23192783417626,3.1691570175309,0,0,0,0,0,0,0,1.45165457231869,1.08004750665353,1.68259969081106,9.14083150092171,5.74258206474195,1.83736198822431,0.766763768145891,2.75765635983006,28.6301290598411,28.3465890549117,31.0285197177612,4.48413378282659,3.38504281328916,3.12548022334056,36.8521558681823,25.8870800614573,22.7669389187447,6.77645746589436,8.11518580554887,6.15118171223492,0,0.529000920747499,0,0,0,0,0,0,0.561777680527007,0,0,0,0.281686839553361,0,0,0,0,0,0,0.22836775943812,0,0.29688427812965,0,0.608930956624282,0,0.301445281105245,0.352766121407114,0,0,0,0,0,0,0,0,6.73395833126558,9.00620839297857,0,0,0,0,35.0510096207285,11.4375150704657,1.88481528169297,12.8629996942285,8.95004100656157,27.6358099264215,18.8199865158599,0,0.124406970610093,0,2.94618598241064,1.04096354370163,1.37941262660084,1.0803727788321,0.60281927134286,1.49680298132921,1.92170580427275,1.3118241438362,5.95017752699736,0,0.567318240503458,0,0,0,0,0,0,0,0,0,0.414251545071004,0.234526059981096,0,0,0,0.154267112887378,0,0,0,0,0,0,0.146199987425332,0,0.134206418760372,9.67333763394985,1.54356918568927,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0.210407459670956,0,0.295220295959204,0.470996183524124,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0.325929952884052,0.169745085775188,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,50.0917840761911,47.8223681296189,0,0.252470927204373,0.631016438832513,0,0.861693590931196,0,0.222798674082394,0.566153061577665,0.404810701674894,0.584511715822624,0.395287777946524,14.1381379225595,1.56134093729095,0.35613120733451,0.325773918707152,0.824850614862677,0,0,0,0,0,0,0,0,0,0,0,0,2.7235168460303,0.36012218806262,0.388076051348264,0,0.177340233642274,0.713475270408282,0.658196082408484,2.13125464380219,0,0,0.220528398054962,0.16488625294148,0,0.0603129249281559,0,0,0,37.2704857041124,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0,0.418176592028937,0.218362563746178,0,0.165306911450672,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0.579568782096571,0.750729901804728,0.73260649706906,0.857473516316263,0,7.34177395402186,4.60325236507177,6.30185064783336,6.53042092906013,5.48066015816514,9.06472676867641,8.10027000278167,14.8605997063993,13.1411298605419,8.80192529978094,1.03787347584177,0.798049746802062,0.682934423016537,0.243106717068294,0.628839487883947,1.10306105070008,0.666740183404846,0.412070114477788,0.320919209591815,0.758091635291392,0.50695859978048,0.377252682772152,0.655490552289177,0.448176066834085,0.34461281373368,0.476293691283074,0.347652977834566,0.77163688185482,0.412085900803307,0.441596760403192,0.342869252385415,0,0.715308569841963,0.581385666529314,0.658765662907314,0.507687647350059,0.73171189149109,0.263069711437843,0.543216455383447,1.12228454331548,0.355905054372522,0.492522411877817,1.22769312950907,0.309873682371932,0.385813221962283,1.74867404556562,0.467863216890817,0.644613162144895,0,0.441182838239031,0.231867835620421
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97651515528744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09012578190223,1.09843091367236,1.74986909166855,0.699932108126813,0,0,0,0,0,0,0.515672092277442,5.46254444320914,4.23192783417626,3.1691570175309,0,0,0,0,0,0,0,1.45165457231869,1.08004750665353,1.68259969081106,9.14083150092171,5.74258206474195,1.83736198822431,0.766763768145891,2.75765635983006,28.6301290598411,28.3465890549117,31.0285197177612,4.48413378282659,3.38504281328916,3.12548022334056,36.8521558681823,25.8870800614573,22.7669389187447,6.77645746589436,8.11518580554887,6.15118171223492,0,0.529000920747499,0,0,0,0,0,0,0.561777680527007,0,0,0,0.281686839553361,0,0,0,0,0,0,0.22836775943812,0,0.29688427812965,0,0.608930956624282,0,0.301445281105245,0.352766121407114,0,0,0,0,0,0,0,0,6.73395833126558,9.00620839297857,0,0,0,0,35.0510096207285,11.4375150704657,1.88481528169297,12.8629996942285,8.95004100656157,27.6358099264215,18.8199865158599,0,0.124406970610093,0,2.94618598241064,1.04096354370163,1.37941262660084,1.0803727788321,0.60281927134286,1.49680298132921,1.92170580427275,1.3118241438362,5.95017752699736,0,0.567318240503458,0,0,0,0,0,0,0,0,0,0.414251545071004,0.234526059981096,0,0,0,0.154267112887378,0,0,0,0,0,0,0.146199987425332,0,0.134206418760372,9.67333763394985,1.54356918568927,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0.210407459670956,0,0.295220295959204,0.470996183524124,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0.325929952884052,0.169745085775188,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,50.0917840761911,47.8223681296189,0,0.252470927204373,0.631016438832513,0,0.861693590931196,0,0.222798674082394,0.566153061577665,0.404810701674894,0.584511715822624,0.395287777946524,14.1381379225595,1.56134093729095,0.35613120733451,0.325773918707152,0.824850614862677,0,0,0,0,0,0,0,0,0,0,0,0,2.7235168460303,0.36012218806262,0.388076051348264,0,0.177340233642274,0.713475270408282,0.658196082408484,2.13125464380219,0,0,0.220528398054962,0.16488625294148,0,0.0603129249281559,0,0,0,37.2704857041124,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0,0.418176592028937,0.218362563746178,0,0.165306911450672,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0.579568782096571,0.750729901804728,0.73260649706906,0.857473516316263,0,7.34177395402186,4.60325236507177,6.30185064783336,6.53042092906013,5.48066015816514,9.06472676867641,8.10027000278167,14.8605997063993,13.1411298605419,8.80192529978094,1.03787347584177,0.798049746802062,0.682934423016537,0.243106717068294,0.628839487883947,1.10306105070008,0.666740183404846,0.412070114477788,0.320919209591815,0.758091635291392,0.50695859978048,0.377252682772152,0.655490552289177,0.448176066834085,0.34461281373368,0.476293691283074,0.347652977834566,0.77163688185482,0.412085900803307,0.441596760403192,0.342869252385415,0,0.715308569841963,0.581385666529314,0.658765662907314,0.507687647350059,0.73171189149109,0.263069711437843,0.543216455383447,1.12228454331548,0.355905054372522,0.492522411877817,1.22769312950907,0.309873682371932,0.385813221962283,1.74867404556562,0.467863216890817,0.644613162144895,0,0.441182838239031,0.231867835620421
|short_description=p5@Bcat1
}}
}}

Latest revision as of 21:53, 26 September 2015

Short description:p5@Bcat1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Bcat1_5end
Coexpression cluster:MCL_coexpression_mm9:20
Association with transcript: 169bp_to_ENSMUST00000087468_5end
EntrezGene:Bcat1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Bcat1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.98
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.75
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C35.46
Mouse Granule cells, donor2.CNhs12357.11731-123E34.23
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.45
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.08
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F19.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.74
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.84
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.77
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D328.63
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F328.35
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D731.03
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.48
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.39
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E436.85
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E525.89
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I622.77
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D66.78
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F68.12
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.15
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.53
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B26.73
cerebellum, neonate N30.CNhs11135.1395-42I29.01
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A435.05
corpus striatum, adult.CNhs10487.19-21D811.44
corpus striatum, neonate N00.CNhs11226.630-43F11.88
cortex, adult.CNhs10473.12-14D512.86
cortex, neonate N30.CNhs11107.1392-42F28.95
diencephalon, adult.CNhs10482.20-12F227.64
diencephalon, neonate N30.CNhs11201.1388-42B218.82
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G42.95
eyeball, embryo E12.CNhs11016.345-16C61.04
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C91.08
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C61.50
eyeball, neonate N01.CNhs11140.1532-43E71.92
eyeball, neonate N02.CNhs11205.1551-44G81.31
eyeball, neonate N16.CNhs11188.777-19A25.95
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E89.67
hippocampus, neonate N00.CNhs11228.627-43G11.54
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C250.09
medulla oblongata, neonate N30.CNhs11200.1396-42A347.82
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I914.14
ovary, adult.CNhs10507.91-2I71.56
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.82
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.72
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E92.13
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C937.27
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A17.34
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.60
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.30
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.53
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A45.48
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.06
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A68.10
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A714.86
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A813.14
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A98.80
whole body, embryo E11.CNhs11014.324-5I81.04
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.19e-2523
neuroblast (sensu Vertebrata)1.19e-2523
neuron7.17e-1633
neuronal stem cell7.17e-1633
neuroblast7.17e-1633
electrically signaling cell7.17e-1633
neural cell3.81e-1443
ectodermal cell1.15e-1344
neurectodermal cell1.15e-1344
electrically responsive cell1.87e-1239
electrically active cell1.87e-1239

Uber anatomy
Ontology termp-valuen
neurectoderm4.59e-5064
neural plate4.59e-5064
presumptive neural plate4.59e-5064
regional part of nervous system6.67e-4954
neural tube1.14e-4552
neural rod1.14e-4552
future spinal cord1.14e-4552
neural keel1.14e-4552
central nervous system1.26e-4273
ecto-epithelium3.75e-4273
ectoderm-derived structure1.38e-4195
ectoderm1.38e-4195
presumptive ectoderm1.38e-4195
nervous system4.10e-4175
brain9.27e-3947
future brain9.27e-3947
gray matter9.43e-3934
pre-chordal neural plate1.37e-3849
regional part of brain2.77e-3746
brain grey matter3.62e-3229
regional part of telencephalon3.62e-3229
telencephalon3.62e-3229
anterior neural tube1.26e-3140
structure with developmental contribution from neural crest1.53e-3092
regional part of forebrain4.17e-3039
forebrain4.17e-3039
future forebrain4.17e-3039
cerebral cortex6.43e-2221
cerebral hemisphere6.43e-2221
pallium6.43e-2221
regional part of cerebral cortex4.89e-1817
tube4.99e-14114
posterior neural tube8.58e-1412
chordal neural plate8.58e-1412
occipital lobe9.47e-1410
visual cortex9.47e-1410
neocortex9.47e-1410
anatomical conduit2.53e-12122
basal ganglion3.25e-118
nuclear complex of neuraxis3.25e-118
aggregate regional part of brain3.25e-118
collection of basal ganglia3.25e-118
cerebral subcortex3.25e-118
epithelium1.12e-09174
cell layer2.04e-09176
spinal cord4.66e-096
dorsal region element4.66e-096
dorsum4.66e-096
regional part of spinal cord1.57e-075
gray matter of spinal cord1.57e-075
regional part of midbrain1.77e-074
midbrain1.77e-074
presumptive midbrain1.77e-074
midbrain neural tube1.77e-074
organ system subdivision1.79e-07194
eye2.41e-079
camera-type eye2.41e-079
simple eye2.41e-079
immature eye2.41e-079
ocular region2.41e-079
visual system2.41e-079
face2.41e-079
optic cup2.41e-079
optic vesicle2.41e-079
eye primordium2.41e-079
corpus striatum7.10e-075
striatum7.10e-075
ventral part of telencephalon7.10e-075
future corpus striatum7.10e-075
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