FFCP PHASE1:Mm9::chr6:48791475..48791552,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:48791475..48791552,+
|short_description=p1@Tmem176a
|description=CAGE_peak_1_at_Tmem176a_5end
|association_with_transcript=0bp_to_ENSMUST00000101426,NM_025...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=66058 | |EntrezGene=66058 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1828 | |||
|TSSclassifier=NA | |||
|UniProt=Q9DCS1 | |UniProt=Q9DCS1 | ||
|association_with_transcript=0bp_to_ENSMUST00000101426,NM_025326,uc009bvw.1,uc009bvx.1_5end | |||
|cluster_id=chr6:48791475..48791552,+ | |||
|description=CAGE_peak_1_at_Tmem176a_5end | |||
|id=chr6:48791475..48791552,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009569!5.21e-17!66;UBERON:0002100!3.11e-15!98;UBERON:0005177!1.49e-13!85;UBERON:0003104!7.10e-12!131;UBERON:0009142!7.10e-12!131;UBERON:0004119!2.90e-11!130;UBERON:0000925!2.90e-11!130;UBERON:0006595!2.90e-11!130;UBERON:0005172!3.16e-11!49;UBERON:0005173!3.16e-11!49;UBERON:0002417!3.16e-11!49;UBERON:0000916!3.16e-11!49;UBERON:0001007!3.22e-11!128;UBERON:0001555!3.22e-11!128;UBERON:0007026!3.22e-11!128;UBERON:0005256!1.46e-10!47;UBERON:0004921!1.68e-10!126;UBERON:0004185!1.68e-10!126;UBERON:0000466!6.80e-10!79;UBERON:0002365!1.66e-09!25;UBERON:0002330!1.66e-09!25;UBERON:0009854!1.93e-08!23;UBERON:0009856!1.93e-08!23;UBERON:0002107!4.17e-08!22;UBERON:0007499!4.17e-08!22;UBERON:0006925!4.17e-08!22;UBERON:0009497!4.17e-08!22;UBERON:0000015!4.17e-08!22;UBERON:0002423!4.17e-08!22;UBERON:0006235!4.17e-08!22;UBERON:0008835!4.17e-08!22;UBERON:0003894!4.17e-08!22;UBERON:0004161!4.17e-08!22;UBERON:0008836!4.17e-08!22;UBERON:0000926!8.83e-08!193;UBERON:0004120!8.83e-08!193;UBERON:0006603!8.83e-08!193;UBERON:0005157!2.33e-07!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,2.34e-18,90;UBERON:0009569,5.21e-17,66;UBERON:0005177,2.43e-16,79;UBERON:0003104,1.36e-12,61;UBERON:0009142,1.36e-12,61;UBERON:0005172,3.16e-11,49;UBERON:0005173,3.16e-11,49;UBERON:0002417,3.16e-11,49;UBERON:0000916,3.16e-11,49;UBERON:0005256,4.75e-11,45;UBERON:0004119,5.01e-11,118;UBERON:0000925,5.01e-11,118;UBERON:0006595,5.01e-11,118;UBERON:0001007,5.38e-11,116;UBERON:0001555,5.38e-11,116;UBERON:0007026,5.38e-11,116;UBERON:0004921,2.78e-10,114;UBERON:0002365,1.66e-09,25;UBERON:0002330,1.66e-09,25;UBERON:0009854,1.93e-08,23;UBERON:0009856,1.93e-08,23;UBERON:0002107,4.17e-08,22;UBERON:0007499,4.17e-08,22;UBERON:0006925,4.17e-08,22;UBERON:0009497,4.17e-08,22;UBERON:0000015,4.17e-08,22;UBERON:0002423,4.17e-08,22;UBERON:0006235,4.17e-08,22;UBERON:0008835,4.17e-08,22;UBERON:0003894,4.17e-08,22;UBERON:0004161,4.17e-08,22;UBERON:0008836,4.17e-08,22 | |||
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| ||
|short_description=p1@Tmem176a | |||
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Latest revision as of 08:17, 27 September 2015
Short description: | p1@Tmem176a |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tmem176a_5end |
Coexpression cluster: | MCL_coexpression_mm9:1828 |
Association with transcript: | 0bp_to_ENSMUST00000101426, NM_025326, uc009bvw.1, uc009bvx.1_5end |
EntrezGene: | Tmem176a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
trunk | 2.34e-18 | 90 |
subdivision of trunk | 5.21e-17 | 66 |
trunk region element | 2.43e-16 | 79 |
mesenchyme | 1.36e-12 | 61 |
entire embryonic mesenchyme | 1.36e-12 | 61 |
abdomen element | 3.16e-11 | 49 |
abdominal segment element | 3.16e-11 | 49 |
abdominal segment of trunk | 3.16e-11 | 49 |
abdomen | 3.16e-11 | 49 |
trunk mesenchyme | 4.75e-11 | 45 |
endoderm-derived structure | 5.01e-11 | 118 |
endoderm | 5.01e-11 | 118 |
presumptive endoderm | 5.01e-11 | 118 |
digestive system | 5.38e-11 | 116 |
digestive tract | 5.38e-11 | 116 |
primitive gut | 5.38e-11 | 116 |
subdivision of digestive tract | 2.78e-10 | 114 |
exocrine gland | 1.66e-09 | 25 |
exocrine system | 1.66e-09 | 25 |
digestive tract diverticulum | 1.93e-08 | 23 |
sac | 1.93e-08 | 23 |
liver | 4.17e-08 | 22 |
epithelial sac | 4.17e-08 | 22 |
digestive gland | 4.17e-08 | 22 |
epithelium of foregut-midgut junction | 4.17e-08 | 22 |
anatomical boundary | 4.17e-08 | 22 |
hepatobiliary system | 4.17e-08 | 22 |
foregut-midgut junction | 4.17e-08 | 22 |
hepatic diverticulum | 4.17e-08 | 22 |
liver primordium | 4.17e-08 | 22 |
septum transversum | 4.17e-08 | 22 |
liver bud | 4.17e-08 | 22 |