FFCP PHASE1:Mm9::chr6:78320871..78320886,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:78320871..78320886,+
|short_description=p1@Reg3b
|description=CAGE_peak_1_at_Reg3b_5end
|association_with_transcript=0bp_to_ENSMUST00000096904,ENSMUST00000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=18489 | |EntrezGene=18489 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=448 | |||
|TSSclassifier=NA | |||
|UniProt=P35230,E9PXT3 | |UniProt=P35230,E9PXT3 | ||
|association_with_transcript=0bp_to_ENSMUST00000096904,ENSMUST00000164851,NM_011036,uc009cjw.1_5end | |||
|cluster_id=chr6:78320871..78320886,+ | |||
|description=CAGE_peak_1_at_Reg3b_5end | |||
|id=chr6:78320871..78320886,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.52e-10!9;CL:0002251!1.52e-10!9;CL:0000239!5.12e-08!6;CL:0000677!5.12e-08!6;CL:0000212!5.12e-08!6;CL:0000584!5.12e-08!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.64e-16,9;CL:0002251,1.64e-16,9;CL:0000239,2.61e-12,6;CL:0000677,2.61e-12,6;CL:0000584,2.61e-12,6;CL:0000075,2.05e-10,7;CL:0000066,3.84e-09,25;CL:0002076,3.99e-09,15;CL:0000682,2.34e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.51e-30!43;UBERON:0005409!4.95e-27!59;UBERON:0000344!2.86e-17!15;UBERON:0001242!3.94e-15!13;UBERON:0000060!3.94e-15!13;UBERON:0001262!3.94e-15!13;UBERON:0004786!3.94e-15!13;UBERON:0001007!2.00e-12!128;UBERON:0001555!2.00e-12!128;UBERON:0007026!2.00e-12!128;UBERON:0004119!5.63e-12!130;UBERON:0000925!5.63e-12!130;UBERON:0006595!5.63e-12!130;UBERON:0004921!3.89e-11!126;UBERON:0004185!3.89e-11!126;UBERON:0003350!1.52e-10!9;UBERON:0004808!1.52e-10!9;UBERON:0001277!1.52e-10!9;UBERON:0004923!9.12e-10!24;UBERON:0002108!6.31e-09!16;UBERON:0000485!3.99e-08!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.10e-42,31;UBERON:0005409,2.59e-29,47;UBERON:0000344,9.81e-28,15;UBERON:0001242,3.67e-24,13;UBERON:0001262,3.67e-24,13;UBERON:0004786,3.67e-24,13;UBERON:0003350,1.64e-16,9;UBERON:0004808,1.64e-16,9;UBERON:0001277,1.64e-16,9;UBERON:0004923,8.68e-16,24;UBERON:0000485,3.78e-13,11;UBERON:0001007,4.87e-09,116;UBERON:0001555,4.87e-09,116;UBERON:0007026,4.87e-09,116;UBERON:0002108,5.49e-09,4;UBERON:0004119,9.38e-09,118;UBERON:0000925,9.38e-09,118;UBERON:0006595,9.38e-09,118;UBERON:0001264,1.51e-08,12;UBERON:0004921,1.30e-07,114;UBERON:0000331,1.69e-07,3;UBERON:0002116,1.69e-07,3;UBERON:0001204,1.69e-07,3;UBERON:0001168,1.69e-07,3 | |||
|phase1_expression=0,2963.84813708109,3194.09466051454,1043.19906479726,1961.5076784699,182.820527112048,973.931098642747,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0,0,0,586.692214383422,1035.09467617507,5740.59694525786,4680.22908826835,2567.77067991774,10705.9194521721,3531.95023845567,9205.58561087629,0,0,0,9.24325183204079,27.5949511295097,14.4960242946282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71390590642282,0.441737081903227,0,0,0,0,0,0,0,0,0,0,0,0,3.24091444021034,5.55249555116501,0.372798891650601,0,0,0,0,0,0,0,0,23.3137737418708,0,0,0,0,0,0,0,0,0,0,144.442607844611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,83.876292548155,0,0,1055.5485521219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,533.626334518834,4203.44175711704,0,0,0.128867461322093,1.4117846723634,2.89091456998331,2.85338439168839,568.485815730325,15.481701744057,7.54005626400809,5.17286827306992,1.75467678407208,568.053866269468,106.988334687974,63.7252074413975,0,0,0,0,0,0.140271639780637,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,83.6294371541766,0,0,0,0,5.53383266299069,33.5956781118688,23.2661586865604,13.1904030002347,143.164651344925,1842.71727789098,21.6584640821192,0,0,0,0,0,0,0.164549020602121,1.2178597964584,0,0,0,0,0,0,0,0,44.3050871677373,0,0,0,0,0,0.136694227721025,0,0,0,0,6.68269432610579,0,0,0.108005340821801,0.418176592028937,0.218362563746178,0.269728692769641,0,0,4.01806417204558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0.198681354781265,0.480781798079875,0,0.100966449948148,0.457240839929999,0.201652370273681,0.38983152295901,0.577271049841977,0.818138315270983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.618105171716683,0.320919209591815,0.252697211763798,0.25347929989024,0.188626341386076,0.187283014939765,0,0.402048282689293,0.476293691283074,0.463537303779422,0.38581844092741,0,1.17759136107518,0.685738504770831,0.177475806159338,0,0.436039249896986,0,0.169229215783353,0.365855945745545,0.789209134313529,0.271608227691724,0,0.830445126869219,0.394017929502254,0,0.309873682371932,0,0,0.701794825336225,0.859484216193193,0,0,0 | |phase1_expression=0,2963.84813708109,3194.09466051454,1043.19906479726,1961.5076784699,182.820527112048,973.931098642747,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0,0,0,586.692214383422,1035.09467617507,5740.59694525786,4680.22908826835,2567.77067991774,10705.9194521721,3531.95023845567,9205.58561087629,0,0,0,9.24325183204079,27.5949511295097,14.4960242946282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71390590642282,0.441737081903227,0,0,0,0,0,0,0,0,0,0,0,0,3.24091444021034,5.55249555116501,0.372798891650601,0,0,0,0,0,0,0,0,23.3137737418708,0,0,0,0,0,0,0,0,0,0,144.442607844611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,83.876292548155,0,0,1055.5485521219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,533.626334518834,4203.44175711704,0,0,0.128867461322093,1.4117846723634,2.89091456998331,2.85338439168839,568.485815730325,15.481701744057,7.54005626400809,5.17286827306992,1.75467678407208,568.053866269468,106.988334687974,63.7252074413975,0,0,0,0,0,0.140271639780637,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,83.6294371541766,0,0,0,0,5.53383266299069,33.5956781118688,23.2661586865604,13.1904030002347,143.164651344925,1842.71727789098,21.6584640821192,0,0,0,0,0,0,0.164549020602121,1.2178597964584,0,0,0,0,0,0,0,0,44.3050871677373,0,0,0,0,0,0.136694227721025,0,0,0,0,6.68269432610579,0,0,0.108005340821801,0.418176592028937,0.218362563746178,0.269728692769641,0,0,4.01806417204558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0.198681354781265,0.480781798079875,0,0.100966449948148,0.457240839929999,0.201652370273681,0.38983152295901,0.577271049841977,0.818138315270983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.618105171716683,0.320919209591815,0.252697211763798,0.25347929989024,0.188626341386076,0.187283014939765,0,0.402048282689293,0.476293691283074,0.463537303779422,0.38581844092741,0,1.17759136107518,0.685738504770831,0.177475806159338,0,0.436039249896986,0,0.169229215783353,0.365855945745545,0.789209134313529,0.271608227691724,0,0.830445126869219,0.394017929502254,0,0.309873682371932,0,0,0.701794825336225,0.859484216193193,0,0,0 | ||
|short_description=p1@Reg3b | |||
}} | }} |
Latest revision as of 18:06, 1 October 2015
Short description: | p1@Reg3b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Reg3b_5end |
Coexpression cluster: | MCL_coexpression_mm9:448 |
Association with transcript: | 0bp_to_ENSMUST00000096904, ENSMUST00000164851, NM_011036, uc009cjw.1_5end |
EntrezGene: | Reg3b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.64e-16 | 9 |
epithelial cell of alimentary canal | 1.64e-16 | 9 |
brush border epithelial cell | 2.61e-12 | 6 |
gut absorptive cell | 2.61e-12 | 6 |
enterocyte | 2.61e-12 | 6 |
columnar/cuboidal epithelial cell | 2.05e-10 | 7 |
epithelial cell | 3.84e-09 | 25 |
endo-epithelial cell | 3.99e-09 | 15 |
M cell of gut | 2.34e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.10e-42 | 31 |
gastrointestinal system | 2.59e-29 | 47 |
mucosa | 9.81e-28 | 15 |
intestinal mucosa | 3.67e-24 | 13 |
wall of intestine | 3.67e-24 | 13 |
gastrointestinal system mucosa | 3.67e-24 | 13 |
epithelium of mucosa | 1.64e-16 | 9 |
gastrointestinal system epithelium | 1.64e-16 | 9 |
intestinal epithelium | 1.64e-16 | 9 |
organ component layer | 8.68e-16 | 24 |
simple columnar epithelium | 3.78e-13 | 11 |
digestive system | 4.87e-09 | 116 |
digestive tract | 4.87e-09 | 116 |
primitive gut | 4.87e-09 | 116 |
small intestine | 5.49e-09 | 4 |
endoderm-derived structure | 9.38e-09 | 118 |
endoderm | 9.38e-09 | 118 |
presumptive endoderm | 9.38e-09 | 118 |
pancreas | 1.51e-08 | 12 |
subdivision of digestive tract | 1.30e-07 | 114 |
ileal mucosa | 1.69e-07 | 3 |
ileum | 1.69e-07 | 3 |
mucosa of small intestine | 1.69e-07 | 3 |
wall of small intestine | 1.69e-07 | 3 |