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FFCP PHASE1:Mm9::chr7:131126313..131126377,+: Difference between revisions

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(Created page with "{{FFCP |id=chr7:131126313..131126377,+ |short_description=p1@Hs3st4 |description=CAGE_peak_1_at_Hs3st4_5end |association_with_transcript=-5bp_to_ENSMUST00000106437_5end |...")
 
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{{FFCP
{{FFCP
|id=chr7:131126313..131126377,+
|DHSsupport=NA
|short_description=p1@Hs3st4
|DPIdataset=NA
|description=CAGE_peak_1_at_Hs3st4_5end
|association_with_transcript=-5bp_to_ENSMUST00000106437_5end
|EntrezGene=628779
|EntrezGene=628779
|HGNC=
|HGNC=
|MCL_coexpression_id=13
|TSSclassifier=NA
|UniProt=D3YVV6
|UniProt=D3YVV6
|association_with_transcript=-5bp_to_ENSMUST00000106437_5end
|cluster_id=chr7:131126313..131126377,+
|description=CAGE_peak_1_at_Hs3st4_5end
|id=chr7:131126313..131126377,+
|ontology_enrichment_celltype=CL:0000117!9.53e-16!23;CL:0000337!9.53e-16!23;CL:0000540!5.15e-11!33;CL:0000047!5.15e-11!33;CL:0000031!5.15e-11!33;CL:0000404!5.15e-11!33;CL:0000393!1.86e-07!39;CL:0000211!1.86e-07!39;CL:0000221!3.50e-07!44;CL:0000133!3.50e-07!44;CL:0002319!5.83e-07!43
|ontology_enrichment_celltype_v019_2=CL:0000117,1.32e-23,23;CL:0000337,1.32e-23,23;CL:0000540,5.58e-14,33;CL:0000047,5.58e-14,33;CL:0000031,5.58e-14,33;CL:0000404,5.58e-14,33;CL:0000393,1.17e-10,39;CL:0000211,1.17e-10,39;CL:0002319,5.41e-09,43;CL:0000221,1.25e-08,44;CL:0000133,1.25e-08,44;CL:0002609,2.07e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003056!3.58e-22!49;UBERON:0000033!7.15e-22!63;UBERON:0002346!1.60e-21!71;UBERON:0003075!1.60e-21!71;UBERON:0007284!1.60e-21!71;UBERON:0002020!1.66e-20!34;UBERON:0001049!1.69e-20!52;UBERON:0005068!1.69e-20!52;UBERON:0006241!1.69e-20!52;UBERON:0007135!1.69e-20!52;UBERON:0001017!1.00e-19!73;UBERON:0005743!1.00e-19!73;UBERON:0000073!1.65e-19!75;UBERON:0001016!1.65e-19!75;UBERON:0000955!3.85e-19!50;UBERON:0006238!3.85e-19!50;UBERON:0002616!1.34e-18!49;UBERON:0003080!2.65e-18!40;UBERON:0004121!9.07e-18!102;UBERON:0000924!9.07e-18!102;UBERON:0006601!9.07e-18!102;UBERON:0002780!9.74e-18!39;UBERON:0001890!9.74e-18!39;UBERON:0006240!9.74e-18!39;UBERON:0002791!2.85e-17!29;UBERON:0003528!2.85e-17!29;UBERON:0001893!2.85e-17!29;UBERON:0000956!2.49e-12!21;UBERON:0001869!2.49e-12!21;UBERON:0000203!2.49e-12!21;UBERON:0007811!1.74e-11!86;UBERON:0000153!3.39e-11!94;UBERON:0002619!1.76e-09!17;UBERON:0002021!5.56e-09!10;UBERON:0000411!5.56e-09!10;UBERON:0001950!5.56e-09!10
|ontology_enrichment_uberon_v019_2=UBERON:0002020,4.37e-32,34;UBERON:0002346,1.14e-27,64;UBERON:0003075,1.14e-27,64;UBERON:0007284,1.14e-27,64;UBERON:0000073,1.27e-27,54;UBERON:0003528,5.04e-27,29;UBERON:0002791,5.04e-27,29;UBERON:0001893,5.04e-27,29;UBERON:0001049,1.25e-25,52;UBERON:0005068,1.25e-25,52;UBERON:0006241,1.25e-25,52;UBERON:0007135,1.25e-25,52;UBERON:0003056,1.75e-25,49;UBERON:0001017,2.19e-23,73;UBERON:0010371,2.37e-22,73;UBERON:0001016,2.38e-22,75;UBERON:0003080,1.35e-21,40;UBERON:0004121,1.47e-21,95;UBERON:0000924,1.47e-21,95;UBERON:0006601,1.47e-21,95;UBERON:0000955,5.64e-21,47;UBERON:0006238,5.64e-21,47;UBERON:0002780,9.18e-21,39;UBERON:0001890,9.18e-21,39;UBERON:0006240,9.18e-21,39;UBERON:0002616,3.37e-20,46;UBERON:0000956,2.70e-19,21;UBERON:0001869,2.70e-19,21;UBERON:0000203,2.70e-19,21;UBERON:0010314,3.09e-16,92;UBERON:0002619,8.08e-15,17;UBERON:0002021,4.37e-13,10;UBERON:0000411,4.37e-13,10;UBERON:0001950,4.37e-13,10;UBERON:0002420,9.27e-09,8;UBERON:0007245,9.27e-09,8;UBERON:0010009,9.27e-09,8;UBERON:0010011,9.27e-09,8;UBERON:0000454,9.27e-09,8;UBERON:0002240,8.48e-07,6;UBERON:0005174,8.48e-07,6;UBERON:0001137,8.48e-07,6
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38121212422995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.2316460859598,16.398720357433,22.1840991227163,0.677689064138264,0,0,0,0,0.299600110518405,0,19.4936471139938,22.5459917013923,26.0802952075714,14.8538511889978,13.2521124570968,6.85948475603743,5.271500906003,17.4651569455904,15.4162233399144,10.4703617229854,10.5988507946808,11.7378796079873,16.0103376304217,11.9810075228055,13.6799669510677,12.9435400307286,14.6686317865738,15.3206864446307,14.0947963991112,12.6751623161204,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.983110940922263,0,0,0,0.704217098883403,0,0,0,0,0,0,0.22836775943812,0,0,0.173485326766136,0.304465478312141,0.461230994512117,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0.484875253135222,0,0.292780797011547,0,0,0,0,0,10.1857634795279,15.5550204958333,11.8115090986093,15.9918374576894,25.8272611903634,8.72709787150152,15.0884374653015,0.509196819251581,0.124406970610093,0,0.631325567659422,0.260240885925407,2.29902104433473,1.26043490863744,7.83665052745718,17.1451977861346,13.4519406299092,13.7741535102801,1.81092359517311,0,0.945530400839096,0.879755620819744,0.219195732427575,0,0.696504333044333,0.205782136407943,0.59710280045548,0,0,0,0.621377317606506,1.17263029990548,0.36012412292203,0.23674473558521,1.77087808572663,0.925602677324269,0.465067889500816,0.536546802799238,0.350296027101508,0,0,0.243206428637567,0,0.219550115291051,0,22.0804445992334,11.0107935245834,0,0.264450566663544,0.426576501070468,0.464473343720877,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0.379335801906163,0.114248512609729,0,0,0,0.0701358198903186,0.252946148497029,0.442830443938806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0.339490171550376,0,0,0,0.195133647857799,0.157635144106191,0,0,0,0,0,0,0,0,0,5.9403718295483,9.49414661396846,0,0,0.631016438832513,0,0,0,0.222798674082394,0,0.404810701674894,0.292255857911312,0,6.42642632843614,0,0.890328018336276,0.651547837414304,0,0,0.242780636154981,0,0.188605079755898,0.295301892880773,0,0,0,0.356497378384721,0,0,0,0.340439605753788,0.36012218806262,0.129358683782755,0.428674070063185,0,0.891844088010353,0.658196082408484,0.608929898229199,0.23467170806371,0,0,0,0,0.0603129249281559,0,0,0,3.33765543618917,0,0.412773735926445,0.185194527369712,0.188368457004691,0,0,0,0,0,0,0,0.406638934253697,0.108005340821801,0.209088296014469,0.218362563746178,0.134864346384821,0.247960367176008,0,0.518459893167171,0,0,0.299033092087958,0,0.388902376688095,0.645799117388655,0.506868376472335,0.117357238645754,0.13020438484395,0.209718688851422,0.241584120826006,0,0,0.202725215290164,0.205421914329655,0.129920822977795,0,0,0,0.147689527174577,0,0.0762068066549998,0,0,0,0,0,0,0,0,0.19318959403219,0.375364950902364,0.183151624267265,0,0,29.3670958160875,26.6988637174163,29.7905666988486,34.0269301040501,24.6629707117431,19.6402413321322,31.0510350106631,14.8605997063993,18.5788387683524,24.8524949640874,0.207574695168353,0,1.02440163452481,1.70174701947806,2.93458427679175,2.38996560985018,1.55572709461131,1.85431551515005,2.56735367673452,1.26348605881899,1.2673964994512,1.88626341386076,1.40462261204824,1.79270426733634,1.55075766180156,2.38146845641537,2.43357084484197,1.35036454324594,3.29668720642645,1.76638704161277,1.37147700954166,1.77475806159337,2.86123427936785,1.88950341622027,1.78807822789128,2.5384382367503,2.0122077016005,1.57841826862706,1.62964936615034,0.561142271657738,2.37270036248348,2.85662998889134,2.86461730218783,1.85924209423159,1.54325288784913,4.74640098082097,2.10538447600868,1.50409737833809,0.382576664137687,0.441182838239031,0
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38121212422995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.2316460859598,16.398720357433,22.1840991227163,0.677689064138264,0,0,0,0,0.299600110518405,0,19.4936471139938,22.5459917013923,26.0802952075714,14.8538511889978,13.2521124570968,6.85948475603743,5.271500906003,17.4651569455904,15.4162233399144,10.4703617229854,10.5988507946808,11.7378796079873,16.0103376304217,11.9810075228055,13.6799669510677,12.9435400307286,14.6686317865738,15.3206864446307,14.0947963991112,12.6751623161204,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.983110940922263,0,0,0,0.704217098883403,0,0,0,0,0,0,0.22836775943812,0,0,0.173485326766136,0.304465478312141,0.461230994512117,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0.484875253135222,0,0.292780797011547,0,0,0,0,0,10.1857634795279,15.5550204958333,11.8115090986093,15.9918374576894,25.8272611903634,8.72709787150152,15.0884374653015,0.509196819251581,0.124406970610093,0,0.631325567659422,0.260240885925407,2.29902104433473,1.26043490863744,7.83665052745718,17.1451977861346,13.4519406299092,13.7741535102801,1.81092359517311,0,0.945530400839096,0.879755620819744,0.219195732427575,0,0.696504333044333,0.205782136407943,0.59710280045548,0,0,0,0.621377317606506,1.17263029990548,0.36012412292203,0.23674473558521,1.77087808572663,0.925602677324269,0.465067889500816,0.536546802799238,0.350296027101508,0,0,0.243206428637567,0,0.219550115291051,0,22.0804445992334,11.0107935245834,0,0.264450566663544,0.426576501070468,0.464473343720877,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0.379335801906163,0.114248512609729,0,0,0,0.0701358198903186,0.252946148497029,0.442830443938806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0.339490171550376,0,0,0,0.195133647857799,0.157635144106191,0,0,0,0,0,0,0,0,0,5.9403718295483,9.49414661396846,0,0,0.631016438832513,0,0,0,0.222798674082394,0,0.404810701674894,0.292255857911312,0,6.42642632843614,0,0.890328018336276,0.651547837414304,0,0,0.242780636154981,0,0.188605079755898,0.295301892880773,0,0,0,0.356497378384721,0,0,0,0.340439605753788,0.36012218806262,0.129358683782755,0.428674070063185,0,0.891844088010353,0.658196082408484,0.608929898229199,0.23467170806371,0,0,0,0,0.0603129249281559,0,0,0,3.33765543618917,0,0.412773735926445,0.185194527369712,0.188368457004691,0,0,0,0,0,0,0,0.406638934253697,0.108005340821801,0.209088296014469,0.218362563746178,0.134864346384821,0.247960367176008,0,0.518459893167171,0,0,0.299033092087958,0,0.388902376688095,0.645799117388655,0.506868376472335,0.117357238645754,0.13020438484395,0.209718688851422,0.241584120826006,0,0,0.202725215290164,0.205421914329655,0.129920822977795,0,0,0,0.147689527174577,0,0.0762068066549998,0,0,0,0,0,0,0,0,0.19318959403219,0.375364950902364,0.183151624267265,0,0,29.3670958160875,26.6988637174163,29.7905666988486,34.0269301040501,24.6629707117431,19.6402413321322,31.0510350106631,14.8605997063993,18.5788387683524,24.8524949640874,0.207574695168353,0,1.02440163452481,1.70174701947806,2.93458427679175,2.38996560985018,1.55572709461131,1.85431551515005,2.56735367673452,1.26348605881899,1.2673964994512,1.88626341386076,1.40462261204824,1.79270426733634,1.55075766180156,2.38146845641537,2.43357084484197,1.35036454324594,3.29668720642645,1.76638704161277,1.37147700954166,1.77475806159337,2.86123427936785,1.88950341622027,1.78807822789128,2.5384382367503,2.0122077016005,1.57841826862706,1.62964936615034,0.561142271657738,2.37270036248348,2.85662998889134,2.86461730218783,1.85924209423159,1.54325288784913,4.74640098082097,2.10538447600868,1.50409737833809,0.382576664137687,0.441182838239031,0
|short_description=p1@Hs3st4
}}
}}

Latest revision as of 20:20, 25 September 2015

Short description:p1@Hs3st4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Hs3st4_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: -5bp_to_ENSMUST00000106437_5end
EntrezGene:Hs3st4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Hs3st4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.38
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C320.23
Mouse Granule cells, donor2.CNhs12357.11731-123E316.40
Mouse Granule cells, donor3.CNhs12108.11636-122C722.18
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D519.49
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F522.55
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D926.08
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F114.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D513.25
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D26.86
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.27
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D617.47
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D315.42
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F310.47
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D710.60
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D411.74
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F416.01
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D811.98
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E413.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E512.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I614.67
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D615.32
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F614.09
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E112.68
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A410.19
corpus striatum, adult.CNhs10487.19-21D815.56
corpus striatum, neonate N00.CNhs11226.630-43F111.81
cortex, adult.CNhs10473.12-14D515.99
cortex, neonate N30.CNhs11107.1392-42F225.83
diencephalon, adult.CNhs10482.20-12F28.73
diencephalon, neonate N30.CNhs11201.1388-42B215.09
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E22.30
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D47.84
eyeball, neonate N00.CNhs11207.633-15C617.15
eyeball, neonate N01.CNhs11140.1532-43E713.45
eyeball, neonate N02.CNhs11205.1551-44G813.77
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F51.17
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C81.77
heart, embryo E16.CNhs11021.457-17C60.93
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E822.08
hippocampus, neonate N00.CNhs11228.627-43G111.01
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C25.94
medulla oblongata, neonate N30.CNhs11200.1396-42A39.49
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I96.43
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C93.34
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.65
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A129.37
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A226.70
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A329.79
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D734.03
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A424.66
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A519.64
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A631.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A714.86
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A818.58
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A924.85
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B12.93
whole body, embryo E16.CNhs10514.453-14F22.39
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.57
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.40
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.79
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.55
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.43
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.79
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.54
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.01
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.63
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.86
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I54.75
whole body, embryo E18.CNhs10516.493-3B32.11
whole body, neonate N00.CNhs10525.657-19C21.50
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.00





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
gray matter4.37e-3234
neurectoderm1.14e-2764
neural plate1.14e-2764
presumptive neural plate1.14e-2764
regional part of nervous system1.27e-2754
brain grey matter5.04e-2729
regional part of telencephalon5.04e-2729
telencephalon5.04e-2729
neural tube1.25e-2552
neural rod1.25e-2552
future spinal cord1.25e-2552
neural keel1.25e-2552
pre-chordal neural plate1.75e-2549
central nervous system2.19e-2373
ecto-epithelium2.37e-2273
nervous system2.38e-2275
anterior neural tube1.35e-2140
ectoderm-derived structure1.47e-2195
ectoderm1.47e-2195
presumptive ectoderm1.47e-2195
brain5.64e-2147
future brain5.64e-2147
regional part of forebrain9.18e-2139
forebrain9.18e-2139
future forebrain9.18e-2139
regional part of brain3.37e-2046
cerebral cortex2.70e-1921
cerebral hemisphere2.70e-1921
pallium2.70e-1921
structure with developmental contribution from neural crest3.09e-1692
regional part of cerebral cortex8.08e-1517
occipital lobe4.37e-1310
visual cortex4.37e-1310
neocortex4.37e-1310
basal ganglion9.27e-098
nuclear complex of neuraxis9.27e-098
aggregate regional part of brain9.27e-098
collection of basal ganglia9.27e-098
cerebral subcortex9.27e-098
spinal cord8.48e-076
dorsal region element8.48e-076
dorsum8.48e-076
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