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FFCP PHASE1:Mm9::chr7:3366529..3366586,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr7:3366529..3366586,+
|DHSsupport=NA
|short_description=p@chr7:3366529..3366586,+
|DPIdataset=NA
|description=CAGE_peak_at_chr7:3366529..3366586,+
|association_with_transcript=NA
|EntrezGene=NA
|EntrezGene=NA
|HGNC=
|HGNC=
|MCL_coexpression_id=168
|TSSclassifier=NA
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|cluster_id=chr7:3366529..3366586,+
|description=CAGE_peak_at_chr7:3366529..3366586,+
|id=chr7:3366529..3366586,+
|ontology_enrichment_celltype=CL:0002319!1.01e-14!43;CL:0000221!1.44e-14!44;CL:0000133!1.44e-14!44;CL:0000540!2.07e-14!33;CL:0000047!2.07e-14!33;CL:0000031!2.07e-14!33;CL:0000404!2.07e-14!33;CL:0000393!2.41e-14!39;CL:0000211!2.41e-14!39;CL:0000055!3.74e-14!50;CL:0000117!2.64e-13!23;CL:0000337!2.64e-13!23
|ontology_enrichment_celltype_v019_2=CL:0000117,4.18e-20,23;CL:0000337,4.18e-20,23;CL:0002319,1.30e-14,43;CL:0000221,4.30e-14,44;CL:0000133,4.30e-14,44;CL:0000540,4.96e-12,33;CL:0000047,4.96e-12,33;CL:0000031,4.96e-12,33;CL:0000404,4.96e-12,33;CL:0000393,3.38e-11,39;CL:0000211,3.38e-11,39;CL:0002321,2.77e-07,70
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!2.03e-33!73;UBERON:0005743!2.03e-33!73;UBERON:0000073!2.15e-31!75;UBERON:0001016!2.15e-31!75;UBERON:0002346!5.44e-27!71;UBERON:0003075!5.44e-27!71;UBERON:0007284!5.44e-27!71;UBERON:0001049!2.75e-26!52;UBERON:0005068!2.75e-26!52;UBERON:0006241!2.75e-26!52;UBERON:0007135!2.75e-26!52;UBERON:0004121!4.20e-26!102;UBERON:0000924!4.20e-26!102;UBERON:0006601!4.20e-26!102;UBERON:0000955!4.26e-25!50;UBERON:0006238!4.26e-25!50;UBERON:0000033!1.03e-24!63;UBERON:0002616!2.76e-24!49;UBERON:0003056!2.41e-20!49;UBERON:0002020!3.97e-19!34;UBERON:0003080!1.59e-18!40;UBERON:0002780!7.71e-18!39;UBERON:0001890!7.71e-18!39;UBERON:0006240!7.71e-18!39;UBERON:0002791!3.97e-16!29;UBERON:0003528!3.97e-16!29;UBERON:0001893!3.97e-16!29;UBERON:0000153!4.34e-13!94;UBERON:0000956!1.81e-12!21;UBERON:0001869!1.81e-12!21;UBERON:0000203!1.81e-12!21;UBERON:0007811!1.51e-11!86;UBERON:0002619!2.66e-10!17;UBERON:0003076!2.42e-08!12;UBERON:0003057!2.42e-08!12;UBERON:0000025!6.11e-08!114;UBERON:0002021!3.70e-07!10;UBERON:0000411!3.70e-07!10;UBERON:0001950!3.70e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.97e-37,54;UBERON:0001017,3.09e-36,73;UBERON:0001049,3.22e-35,52;UBERON:0005068,3.22e-35,52;UBERON:0006241,3.22e-35,52;UBERON:0007135,3.22e-35,52;UBERON:0001016,7.54e-35,75;UBERON:0002346,9.01e-34,64;UBERON:0003075,9.01e-34,64;UBERON:0007284,9.01e-34,64;UBERON:0004121,1.52e-30,95;UBERON:0000924,1.52e-30,95;UBERON:0006601,1.52e-30,95;UBERON:0000955,9.35e-30,47;UBERON:0006238,9.35e-30,47;UBERON:0002616,2.12e-28,46;UBERON:0002020,7.47e-28,34;UBERON:0010371,8.16e-28,73;UBERON:0003056,6.84e-23,49;UBERON:0003528,2.09e-22,29;UBERON:0002791,2.09e-22,29;UBERON:0001893,2.09e-22,29;UBERON:0003080,7.75e-22,40;UBERON:0002780,1.07e-20,39;UBERON:0001890,1.07e-20,39;UBERON:0006240,1.07e-20,39;UBERON:0010314,3.77e-20,92;UBERON:0000956,1.01e-18,21;UBERON:0001869,1.01e-18,21;UBERON:0000203,1.01e-18,21;UBERON:0002619,1.02e-14,17;UBERON:0003076,2.81e-14,12;UBERON:0003057,2.81e-14,12;UBERON:0000025,1.45e-12,114;UBERON:0004111,6.98e-11,122;UBERON:0002021,1.68e-10,10;UBERON:0000411,1.68e-10,10;UBERON:0001950,1.68e-10,10;UBERON:0004733,5.68e-08,6;UBERON:0004732,5.68e-08,6;UBERON:0002028,5.68e-08,6;UBERON:0007277,5.68e-08,6;UBERON:0002240,8.00e-08,6;UBERON:0005174,8.00e-08,6;UBERON:0001137,8.00e-08,6;UBERON:0011216,5.46e-07,194
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00717454380462,0.608261587317087,1.28482726513177,1.56478268869608,1.30815093828268,1.31811709640683,1.1665793944457,0.419959264876088,0,0,0,0,0.257259436035947,0.85960031981627,0,2.42779753031517,1.5869729378161,2.53532561402472,0.338844532069132,0.889294796111139,0,0,0,2.99600110518405,5.37905627450176,1.65903379693564,2.29510095163874,2.52389953621658,2.28520787523043,1.98781686856452,0.979926393719632,1.91690942036473,2.75765635983006,1.10115880999389,4.72443150915195,4.91540906419979,0.923204014111357,1.55528994124096,1.04182674111352,4.74611098302348,2.25105044012672,2.44477196442896,4.71405736757868,2.42031857358475,1.67759501242771,0,0,0,0,0,0,0.649776417447669,0,0.421333260395256,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0.148442139064825,0.173485326766136,1.21786191324856,0.230615497256059,0,0.352766121407114,0.125666591329675,0,0.144599356919912,0,0.485300549842228,0.441683036920787,0.484875253135222,0,5.27005434620785,21.154117388159,0.255457055208591,0,0,0,3.89455662452539,2.28750301409313,0.879580464790051,1.91206752211504,1.27857728665165,3.53239675751252,3.40706652442291,1.12023300235348,0,0,0,1.82168620147785,0.459804208866946,0.900310649026746,1.05493372485001,1.7009124787832,1.2811372028485,1.21812241927647,0.776110112217047,1.5089759505299,0.756424320671277,1.75951124163949,1.09597866213787,0.556094498451196,1.0447564995665,0.411564272815887,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0.804820204198858,0.467061369468678,0.16455984991348,0,0.405344047729279,0,0,0.268412837520744,2.73376933133365,1.64647379806855,0,0,0.639864751605702,1.85789337488351,0.38660238396628,0.201683524623343,0.444756087689741,0.190225626112559,0.474529061544512,0.329397909448022,0.754005626400808,0.397912944082302,0.19496408711912,0.898819408654221,0.216138049874694,0.199141273254367,0.948339504765408,0.456994050438915,0,1.22190796707189,0.193952487167626,0.420814919341911,0.0632365371242573,0.295220295959204,0,0,0,0,0.196558995113203,0,0,0.241177159752417,0,0.287696137450811,0,0,0,0,0,0,0,0.482443521363367,0,0.37898282354097,0.325929952884052,0.339490171550376,0.469380496577004,0.167506257441816,0,0,0.315270288212382,1.32878813789265,0,0,0.172684981865896,0.144649058581512,0,0,0,0,2.88991061978026,2.69586879162067,0.655739781506702,0,0.94652465824877,0.780877488593277,0.861693590931196,0.716906393857656,0.891194696329576,0.283076530788832,0.809621403349789,0.876767573733936,0.790575555893047,6.74774764485795,0.425820255624806,1.78065603667255,1.46598263418218,1.15479086080775,0,0.728341908464944,0.604647113929502,0,0.295301892880773,0,0,0,0,0,0,0,0.680879211507576,1.08036656418786,0.258717367565509,0.214337035031592,0.532020700926821,0.535106452806212,0.658196082408484,1.2178597964584,0,0.42366414172764,0,0.16488625294148,0.484393280087717,0,0.119372344003136,0,0.291480836629851,3.33765543618917,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0.954670618015114,1.73984796469624,0.203319467126849,0.86404272657441,1.25452977608681,1.31017538247707,0.134864346384821,0.165306911450672,0,0,0,0,0.448549638131936,0.330916980914195,0.583353565032143,0.258319646955462,1.18269287843545,1.40828686374905,0.2604087696879,0.209718688851422,0,0,0,0,0.616265742988964,0.129920822977795,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0.269141569828427,0.503653849092235,0,0.187682475451182,0.549454872801795,0.214368379079066,0,4.51801474093653,1.38097570952153,4.01026859407578,7.90524638780963,1.37016503954128,0.755393897389701,4.72515750162264,4.05289082901798,5.89085131679466,4.14208249401456,1.03787347584177,0.798049746802062,0.341467211508268,1.21553358534147,0.419226325255965,0.183843508450014,0.44449345560323,0.618105171716683,0.962757628775446,0.505394423527595,0.50695859978048,0.377252682772152,0.0936415074698824,0.384150914429216,0.459483751644906,0.476293691283074,0.463537303779422,0.192909220463705,0,0.294397840268795,0.342869252385415,0.177475806159338,0,0.436039249896986,0.188218760830661,0.25384382367503,0,0.263069711437843,0.543216455383447,0,0.237270036248348,0.0985044823755635,0.409231043169689,0.154936841185966,0.192906610981141,0.749431733813838,0,0.859484216193193,0.382576664137687,0.220591419119515,0.231867835620421
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00717454380462,0.608261587317087,1.28482726513177,1.56478268869608,1.30815093828268,1.31811709640683,1.1665793944457,0.419959264876088,0,0,0,0,0.257259436035947,0.85960031981627,0,2.42779753031517,1.5869729378161,2.53532561402472,0.338844532069132,0.889294796111139,0,0,0,2.99600110518405,5.37905627450176,1.65903379693564,2.29510095163874,2.52389953621658,2.28520787523043,1.98781686856452,0.979926393719632,1.91690942036473,2.75765635983006,1.10115880999389,4.72443150915195,4.91540906419979,0.923204014111357,1.55528994124096,1.04182674111352,4.74611098302348,2.25105044012672,2.44477196442896,4.71405736757868,2.42031857358475,1.67759501242771,0,0,0,0,0,0,0.649776417447669,0,0.421333260395256,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0.148442139064825,0.173485326766136,1.21786191324856,0.230615497256059,0,0.352766121407114,0.125666591329675,0,0.144599356919912,0,0.485300549842228,0.441683036920787,0.484875253135222,0,5.27005434620785,21.154117388159,0.255457055208591,0,0,0,3.89455662452539,2.28750301409313,0.879580464790051,1.91206752211504,1.27857728665165,3.53239675751252,3.40706652442291,1.12023300235348,0,0,0,1.82168620147785,0.459804208866946,0.900310649026746,1.05493372485001,1.7009124787832,1.2811372028485,1.21812241927647,0.776110112217047,1.5089759505299,0.756424320671277,1.75951124163949,1.09597866213787,0.556094498451196,1.0447564995665,0.411564272815887,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0.804820204198858,0.467061369468678,0.16455984991348,0,0.405344047729279,0,0,0.268412837520744,2.73376933133365,1.64647379806855,0,0,0.639864751605702,1.85789337488351,0.38660238396628,0.201683524623343,0.444756087689741,0.190225626112559,0.474529061544512,0.329397909448022,0.754005626400808,0.397912944082302,0.19496408711912,0.898819408654221,0.216138049874694,0.199141273254367,0.948339504765408,0.456994050438915,0,1.22190796707189,0.193952487167626,0.420814919341911,0.0632365371242573,0.295220295959204,0,0,0,0,0.196558995113203,0,0,0.241177159752417,0,0.287696137450811,0,0,0,0,0,0,0,0.482443521363367,0,0.37898282354097,0.325929952884052,0.339490171550376,0.469380496577004,0.167506257441816,0,0,0.315270288212382,1.32878813789265,0,0,0.172684981865896,0.144649058581512,0,0,0,0,2.88991061978026,2.69586879162067,0.655739781506702,0,0.94652465824877,0.780877488593277,0.861693590931196,0.716906393857656,0.891194696329576,0.283076530788832,0.809621403349789,0.876767573733936,0.790575555893047,6.74774764485795,0.425820255624806,1.78065603667255,1.46598263418218,1.15479086080775,0,0.728341908464944,0.604647113929502,0,0.295301892880773,0,0,0,0,0,0,0,0.680879211507576,1.08036656418786,0.258717367565509,0.214337035031592,0.532020700926821,0.535106452806212,0.658196082408484,1.2178597964584,0,0.42366414172764,0,0.16488625294148,0.484393280087717,0,0.119372344003136,0,0.291480836629851,3.33765543618917,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0.954670618015114,1.73984796469624,0.203319467126849,0.86404272657441,1.25452977608681,1.31017538247707,0.134864346384821,0.165306911450672,0,0,0,0,0.448549638131936,0.330916980914195,0.583353565032143,0.258319646955462,1.18269287843545,1.40828686374905,0.2604087696879,0.209718688851422,0,0,0,0,0.616265742988964,0.129920822977795,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0.269141569828427,0.503653849092235,0,0.187682475451182,0.549454872801795,0.214368379079066,0,4.51801474093653,1.38097570952153,4.01026859407578,7.90524638780963,1.37016503954128,0.755393897389701,4.72515750162264,4.05289082901798,5.89085131679466,4.14208249401456,1.03787347584177,0.798049746802062,0.341467211508268,1.21553358534147,0.419226325255965,0.183843508450014,0.44449345560323,0.618105171716683,0.962757628775446,0.505394423527595,0.50695859978048,0.377252682772152,0.0936415074698824,0.384150914429216,0.459483751644906,0.476293691283074,0.463537303779422,0.192909220463705,0,0.294397840268795,0.342869252385415,0.177475806159338,0,0.436039249896986,0.188218760830661,0.25384382367503,0,0.263069711437843,0.543216455383447,0,0.237270036248348,0.0985044823755635,0.409231043169689,0.154936841185966,0.192906610981141,0.749431733813838,0,0.859484216193193,0.382576664137687,0.220591419119515,0.231867835620421
|short_description=p@chr7:3366529..3366586,+
}}
}}

Latest revision as of 02:43, 5 August 2015

Short description:p@chr7:3366529..3366586, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr7:3366529..3366586, +
Coexpression cluster:MCL_coexpression_mm9:168
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p@chr7:3366529..3366586+

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.61
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.28
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.31
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.32
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.17
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.43
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C83.00
Mouse Microglia, donor2.CNhs12634.11736-123E85.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.66
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.30
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.52
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.99
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.98
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.92
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.72
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.92
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.56
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.75
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.44
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.71
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.68
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B25.27
cerebellum, neonate N30.CNhs11135.1395-42I221.15
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.89
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F10.88
cortex, adult.CNhs10473.12-14D51.91
cortex, neonate N30.CNhs11107.1392-42F21.28
diencephalon, adult.CNhs10482.20-12F23.53
diencephalon, neonate N30.CNhs11201.1388-42B23.41
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.12
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C61.82
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C61.70
eyeball, neonate N01.CNhs11140.1532-43E71.28
eyeball, neonate N02.CNhs11205.1551-44G81.22
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E21.51
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E21.76
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.41
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E82.73
hippocampus, neonate N00.CNhs11228.627-43G11.65
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D51.86
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A31.33
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C22.89
medulla oblongata, neonate N30.CNhs11200.1396-42A32.70
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.66
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I96.75
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H71.78
ovary, neonate N00.CNhs11217.1299-22I41.47
oviduct, adult pregnant day01.CNhs10500.988-6G61.15
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C93.34
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E31.74
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.86
stomach, embryo E17.CNhs11006.1035-18D51.25
stomach, embryo E18.CNhs10999.1286-20C61.31
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G51.18
testis, neonate N00.CNhs11189.1300-22B71.41
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.62
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A14.52
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.01
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D77.91
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.05
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A85.89
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.14
whole body, embryo E11.CNhs11014.324-5I81.04
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)4.18e-2023
neuroblast (sensu Vertebrata)4.18e-2023
neural cell1.30e-1443
ectodermal cell4.30e-1444
neurectodermal cell4.30e-1444
neuron4.96e-1233
neuronal stem cell4.96e-1233
neuroblast4.96e-1233
electrically signaling cell4.96e-1233
electrically responsive cell3.38e-1139
electrically active cell3.38e-1139
embryonic cell2.77e-0770

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.97e-3754
central nervous system3.09e-3673
neural tube3.22e-3552
neural rod3.22e-3552
future spinal cord3.22e-3552
neural keel3.22e-3552
nervous system7.54e-3575
neurectoderm9.01e-3464
neural plate9.01e-3464
presumptive neural plate9.01e-3464
ectoderm-derived structure1.52e-3095
ectoderm1.52e-3095
presumptive ectoderm1.52e-3095
brain9.35e-3047
future brain9.35e-3047
regional part of brain2.12e-2846
gray matter7.47e-2834
ecto-epithelium8.16e-2873
pre-chordal neural plate6.84e-2349
brain grey matter2.09e-2229
regional part of telencephalon2.09e-2229
telencephalon2.09e-2229
anterior neural tube7.75e-2240
regional part of forebrain1.07e-2039
forebrain1.07e-2039
future forebrain1.07e-2039
structure with developmental contribution from neural crest3.77e-2092
cerebral cortex1.01e-1821
cerebral hemisphere1.01e-1821
pallium1.01e-1821
regional part of cerebral cortex1.02e-1417
posterior neural tube2.81e-1412
chordal neural plate2.81e-1412
tube1.45e-12114
anatomical conduit6.98e-11122
occipital lobe1.68e-1010
visual cortex1.68e-1010
neocortex1.68e-1010
segmental subdivision of hindbrain5.68e-086
segmental subdivision of nervous system5.68e-086
hindbrain5.68e-086
presumptive hindbrain5.68e-086
spinal cord8.00e-086
dorsal region element8.00e-086
dorsum8.00e-086
organ system subdivision5.46e-07194
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