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FFCP PHASE1:Mm9::chr7:88638553..88638569,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr7:88638553..88638569,-
|DHSsupport=NA
|short_description=p3@Ap3b2
|DPIdataset=NA
|description=CAGE_peak_3_at_Ap3b2_5end
|association_with_transcript=22bp_to_ENSMUST00000152355_5end
|EntrezGene=11775
|EntrezGene=11775
|HGNC=
|HGNC=
|MCL_coexpression_id=13
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=22bp_to_ENSMUST00000152355_5end
|cluster_id=chr7:88638553..88638569,-
|description=CAGE_peak_3_at_Ap3b2_5end
|id=chr7:88638553..88638569,-
|ontology_enrichment_celltype=CL:0000540!1.90e-17!33;CL:0000047!1.90e-17!33;CL:0000031!1.90e-17!33;CL:0000404!1.90e-17!33;CL:0000221!4.67e-17!44;CL:0000133!4.67e-17!44;CL:0002319!5.29e-17!43;CL:0000117!2.39e-15!23;CL:0000337!2.39e-15!23;CL:0000393!6.82e-13!39;CL:0000211!6.82e-13!39;CL:0000055!1.40e-12!50
|ontology_enrichment_celltype_v019_2=CL:0000540,5.29e-21,33;CL:0000047,5.29e-21,33;CL:0000031,5.29e-21,33;CL:0000404,5.29e-21,33;CL:0002319,1.59e-19,43;CL:0000117,4.06e-19,23;CL:0000337,4.06e-19,23;CL:0000221,9.23e-19,44;CL:0000133,9.23e-19,44;CL:0000393,7.08e-16,39;CL:0000211,7.08e-16,39;CL:0002321,3.67e-07,70
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!1.08e-38!75;UBERON:0001016!1.08e-38!75;UBERON:0001017!1.90e-38!73;UBERON:0005743!1.90e-38!73;UBERON:0004121!1.35e-36!102;UBERON:0000924!1.35e-36!102;UBERON:0006601!1.35e-36!102;UBERON:0002346!7.89e-36!71;UBERON:0003075!7.89e-36!71;UBERON:0007284!7.89e-36!71;UBERON:0000033!9.30e-31!63;UBERON:0001049!9.32e-31!52;UBERON:0005068!9.32e-31!52;UBERON:0006241!9.32e-31!52;UBERON:0007135!9.32e-31!52;UBERON:0000955!1.84e-29!50;UBERON:0006238!1.84e-29!50;UBERON:0002616!9.64e-29!49;UBERON:0003056!9.18e-28!49;UBERON:0003080!1.60e-24!40;UBERON:0002780!8.32e-24!39;UBERON:0001890!8.32e-24!39;UBERON:0006240!8.32e-24!39;UBERON:0002020!2.60e-22!34;UBERON:0002791!4.77e-19!29;UBERON:0003528!4.77e-19!29;UBERON:0001893!4.77e-19!29;UBERON:0007811!6.21e-16!86;UBERON:0000956!5.69e-14!21;UBERON:0001869!5.69e-14!21;UBERON:0000203!5.69e-14!21;UBERON:0000153!2.83e-12!94;UBERON:0002619!7.04e-12!17;UBERON:0002021!2.04e-08!10;UBERON:0000411!2.04e-08!10;UBERON:0001950!2.04e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.18e-46,73;UBERON:0001016,1.04e-45,75;UBERON:0002346,9.59e-43,64;UBERON:0003075,9.59e-43,64;UBERON:0007284,9.59e-43,64;UBERON:0004121,7.92e-41,95;UBERON:0000924,7.92e-41,95;UBERON:0006601,7.92e-41,95;UBERON:0000073,6.18e-40,54;UBERON:0001049,5.97e-38,52;UBERON:0005068,5.97e-38,52;UBERON:0006241,5.97e-38,52;UBERON:0007135,5.97e-38,52;UBERON:0010371,1.75e-34,73;UBERON:0000955,1.71e-33,47;UBERON:0006238,1.71e-33,47;UBERON:0003056,9.43e-33,49;UBERON:0002616,1.35e-32,46;UBERON:0003080,1.09e-29,40;UBERON:0002780,8.82e-29,39;UBERON:0001890,8.82e-29,39;UBERON:0006240,8.82e-29,39;UBERON:0002020,5.31e-28,34;UBERON:0010314,4.32e-26,92;UBERON:0003528,7.75e-24,29;UBERON:0002791,7.75e-24,29;UBERON:0001893,7.75e-24,29;UBERON:0000956,2.31e-17,21;UBERON:0001869,2.31e-17,21;UBERON:0000203,2.31e-17,21;UBERON:0002619,1.07e-14,17;UBERON:0002021,2.71e-10,10;UBERON:0000411,2.71e-10,10;UBERON:0001950,2.71e-10,10;UBERON:0003076,2.29e-08,12;UBERON:0003057,2.29e-08,12;UBERON:0000025,2.32e-08,114;UBERON:0002420,1.43e-07,8;UBERON:0007245,1.43e-07,8;UBERON:0010009,1.43e-07,8;UBERON:0010011,1.43e-07,8;UBERON:0000454,1.43e-07,8;UBERON:0004111,8.71e-07,122
|phase1_expression=0.320297694209588,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63634199468316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.79655344036982,2.19686182734472,1.74986909166855,1.53985063787899,0,0,0,0,0.257259436035947,0,0,12.3413041124355,14.8117474196169,21.5502677192101,0.338844532069132,0,0,0,0,0.299600110518405,1.15265491596466,9.22837549545451,9.04539786822327,9.25429829946081,17.424710048632,11.7060326704355,9.55428233876641,11.7889929352431,15.6267193723704,11.0115880999389,15.3224805702225,15.8214729253931,13.3205150607496,16.0103376304217,9.37644067002168,18.7052609330925,10.1297269805702,12.835052813252,10.0173719061047,10.2507610175354,15.4711540034999,0.681535739998656,1.36028808192214,0,0,0,0,0,0,0.983110940922263,0,0,0,0.845060518660083,0,0,0,0,0,0,0.79928715803342,0,1.33597925158342,0.520455980298408,1.21786191324856,0.230615497256059,1.65794904607885,1.76383060703557,0.125666591329675,0,0.144599356919912,0,0,0,0,0,7.02673912827713,11.51956887474,0,0,0,0,13.6309481858389,12.8100168789215,11.5602003943835,13.0368240144207,16.1100738118108,12.6750707181332,15.0884374653015,0.101839363850316,0.373220911830279,5.05445516867349,1.89397670297827,0.910843100738926,2.06911893990126,2.52086981727489,1.50704817835715,2.72145996605311,3.33095672740609,4.59138450342671,5.95017752699736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.3466752678997,9.15851050175631,0,0.264450566663544,0.639864751605702,0.928946687441754,0.644337306610467,0.605050573870028,0.444756087689741,0.380451252225118,0,0.658795818896044,0,0,0.779856348476481,0,0.216138049874694,0.398282546508734,0.189667900953082,0.228497025219458,0,0.203651327845314,0.193952487167626,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,16.6972613587304,13.244920584919,0,0,1.57754109708128,1.56175497718655,2.58508077279359,1.43381278771531,1.55959071857676,1.41538265394416,2.02405350837447,4.67609372658099,2.37172666767914,13.1741739732941,1.13552068166615,0.712262414669021,0.488660878060728,1.97964147567043,0,0.728341908464944,0,0.188605079755898,0,1.53717573971964,0.516856586336442,0.727067458955011,0,0.948110273807448,0,0,18.7241783164583,0.900305470156551,1.81102157295856,2.14337035031592,5.49754724291048,6.59964625127661,3.78462747384878,11.2652031172402,0,0.63549621259146,0.441056796109924,0.32977250588296,0,0,0.119372344003136,0,0.291480836629851,12.7943458387252,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.406638934253697,0.432021363287205,0.209088296014469,0.436725127492355,0.134864346384821,0.247960367176008,0,0.129614973291793,0,0,0.299033092087958,0.165458490457098,0,0.129159823477731,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0.0762068066549998,0.201652370273681,0,0,0,0,0,0,0,0.772758376128762,0,1.64836461840539,0.214368379079066,0,14.6835479080437,19.7939851698086,17.7597609166213,21.4816477929609,19.182310553578,16.6186657425734,14.1754725048679,13.5096360967266,8.15656336171568,19.1571315348173,1.24544817101012,1.19707462020309,2.21953687480374,1.94485373654635,1.46729213839588,1.10306105070008,1.33348036680969,2.67845574410562,2.56735367673452,0.252697211763798,2.5347929989024,0.754505365544305,1.77918864192777,1.98477972455095,1.32101578597911,0.952587382566147,1.97003354106254,2.12200142510076,1.23625770240992,1.91358596174717,1.37147700954166,1.4198064492747,1.66905332963125,1.16277133305863,2.07040636913727,1.69229215783353,1.09756783723664,1.05227884575137,1.22223702461276,1.68342681497322,2.25406534435931,1.47756723563345,2.45538625901814,1.85924209423159,1.15743966588685,2.24829520144151,1.63752125911786,1.28922632428979,0.191288332068843,0.441182838239031,0.927471342481686
|phase1_expression=0.320297694209588,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63634199468316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.79655344036982,2.19686182734472,1.74986909166855,1.53985063787899,0,0,0,0,0.257259436035947,0,0,12.3413041124355,14.8117474196169,21.5502677192101,0.338844532069132,0,0,0,0,0.299600110518405,1.15265491596466,9.22837549545451,9.04539786822327,9.25429829946081,17.424710048632,11.7060326704355,9.55428233876641,11.7889929352431,15.6267193723704,11.0115880999389,15.3224805702225,15.8214729253931,13.3205150607496,16.0103376304217,9.37644067002168,18.7052609330925,10.1297269805702,12.835052813252,10.0173719061047,10.2507610175354,15.4711540034999,0.681535739998656,1.36028808192214,0,0,0,0,0,0,0.983110940922263,0,0,0,0.845060518660083,0,0,0,0,0,0,0.79928715803342,0,1.33597925158342,0.520455980298408,1.21786191324856,0.230615497256059,1.65794904607885,1.76383060703557,0.125666591329675,0,0.144599356919912,0,0,0,0,0,7.02673912827713,11.51956887474,0,0,0,0,13.6309481858389,12.8100168789215,11.5602003943835,13.0368240144207,16.1100738118108,12.6750707181332,15.0884374653015,0.101839363850316,0.373220911830279,5.05445516867349,1.89397670297827,0.910843100738926,2.06911893990126,2.52086981727489,1.50704817835715,2.72145996605311,3.33095672740609,4.59138450342671,5.95017752699736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.3466752678997,9.15851050175631,0,0.264450566663544,0.639864751605702,0.928946687441754,0.644337306610467,0.605050573870028,0.444756087689741,0.380451252225118,0,0.658795818896044,0,0,0.779856348476481,0,0.216138049874694,0.398282546508734,0.189667900953082,0.228497025219458,0,0.203651327845314,0.193952487167626,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,16.6972613587304,13.244920584919,0,0,1.57754109708128,1.56175497718655,2.58508077279359,1.43381278771531,1.55959071857676,1.41538265394416,2.02405350837447,4.67609372658099,2.37172666767914,13.1741739732941,1.13552068166615,0.712262414669021,0.488660878060728,1.97964147567043,0,0.728341908464944,0,0.188605079755898,0,1.53717573971964,0.516856586336442,0.727067458955011,0,0.948110273807448,0,0,18.7241783164583,0.900305470156551,1.81102157295856,2.14337035031592,5.49754724291048,6.59964625127661,3.78462747384878,11.2652031172402,0,0.63549621259146,0.441056796109924,0.32977250588296,0,0,0.119372344003136,0,0.291480836629851,12.7943458387252,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.406638934253697,0.432021363287205,0.209088296014469,0.436725127492355,0.134864346384821,0.247960367176008,0,0.129614973291793,0,0,0.299033092087958,0.165458490457098,0,0.129159823477731,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0.0762068066549998,0.201652370273681,0,0,0,0,0,0,0,0.772758376128762,0,1.64836461840539,0.214368379079066,0,14.6835479080437,19.7939851698086,17.7597609166213,21.4816477929609,19.182310553578,16.6186657425734,14.1754725048679,13.5096360967266,8.15656336171568,19.1571315348173,1.24544817101012,1.19707462020309,2.21953687480374,1.94485373654635,1.46729213839588,1.10306105070008,1.33348036680969,2.67845574410562,2.56735367673452,0.252697211763798,2.5347929989024,0.754505365544305,1.77918864192777,1.98477972455095,1.32101578597911,0.952587382566147,1.97003354106254,2.12200142510076,1.23625770240992,1.91358596174717,1.37147700954166,1.4198064492747,1.66905332963125,1.16277133305863,2.07040636913727,1.69229215783353,1.09756783723664,1.05227884575137,1.22223702461276,1.68342681497322,2.25406534435931,1.47756723563345,2.45538625901814,1.85924209423159,1.15743966588685,2.24829520144151,1.63752125911786,1.28922632428979,0.191288332068843,0.441182838239031,0.927471342481686
|short_description=p3@Ap3b2
}}
}}

Latest revision as of 04:12, 27 September 2015

Short description:p3@Ap3b2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Ap3b2_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: 22bp_to_ENSMUST00000152355_5end
EntrezGene:Ap3b2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Ap3b2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.64
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C24.80
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.20
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.75
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.54
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C312.34
Mouse Granule cells, donor2.CNhs12357.11731-123E314.81
Mouse Granule cells, donor3.CNhs12108.11636-122C721.55
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D59.23
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F59.05
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D99.25
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F117.42
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D511.71
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D29.55
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F211.79
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D615.63
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D311.01
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F315.32
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D715.82
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D413.32
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F416.01
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D89.38
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E418.71
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E510.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I612.84
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D610.02
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F610.25
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E115.47
Mouse Schwann, donor1.CNhs12507.11728-123D90.68
Mouse Schwann, donor2.CNhs12573.11746-123F91.36
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.80
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.34
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F51.66
adrenal gland, neonate N00.CNhs11191.1311-23C11.76
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B27.03
cerebellum, neonate N30.CNhs11135.1395-42I211.52
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A413.63
corpus striatum, adult.CNhs10487.19-21D812.81
corpus striatum, neonate N00.CNhs11226.630-43F111.56
cortex, adult.CNhs10473.12-14D513.04
cortex, neonate N30.CNhs11107.1392-42F216.11
diencephalon, adult.CNhs10482.20-12F212.68
diencephalon, neonate N30.CNhs11201.1388-42B215.09
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B25.05
eyeball, adult.CNhs10484.31-12G41.89
eyeball, embryo E12.CNhs11016.345-16C60.91
eyeball, embryo E14.CNhs10521.399-16E22.07
eyeball, embryo E15.CNhs10593.426-16C92.52
eyeball, embryo E17.CNhs11023.1261-18D41.51
eyeball, neonate N00.CNhs11207.633-15C62.72
eyeball, neonate N01.CNhs11140.1532-43E73.33
eyeball, neonate N02.CNhs11205.1551-44G84.59
eyeball, neonate N16.CNhs11188.777-19A25.95
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E819.35
hippocampus, neonate N00.CNhs11228.627-43G19.16
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C216.70
medulla oblongata, neonate N30.CNhs11200.1396-42A313.24
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.59
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.56
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.42
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.68
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.37
olfactory brain, adult.CNhs10489.18-22I913.17
ovary, adult.CNhs10507.91-2I71.14
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G61.98
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G818.72
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C71.81
pituitary gland, embryo E14.CNhs11037.398-44A52.14
pituitary gland, embryo E15.CNhs10592.427-16B95.50
pituitary gland, embryo E16.CNhs11036.449-43F66.60
pituitary gland, embryo E17.CNhs11039.1265-44F53.78
pituitary gland, neonate N00.CNhs11190.1308-22E911.27
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C912.79
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E51.65
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A114.68
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A219.79
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A317.76
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D721.48
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A419.18
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A516.62
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A614.18
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A713.51
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A88.16
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A919.16
whole body, embryo E11.CNhs11014.324-5I81.25
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H22.22
whole body, embryo E14.5.CNhs10578.420-27D21.94
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.68
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.57
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.98
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.12
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.48
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.86
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I52.25
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron5.29e-2133
neuronal stem cell5.29e-2133
neuroblast5.29e-2133
electrically signaling cell5.29e-2133
neural cell1.59e-1943
CNS neuron (sensu Vertebrata)4.06e-1923
neuroblast (sensu Vertebrata)4.06e-1923
ectodermal cell9.23e-1944
neurectodermal cell9.23e-1944
electrically responsive cell7.08e-1639
electrically active cell7.08e-1639
embryonic cell3.67e-0770

Uber anatomy
Ontology termp-valuen
central nervous system2.18e-4673
nervous system1.04e-4575
neurectoderm9.59e-4364
neural plate9.59e-4364
presumptive neural plate9.59e-4364
ectoderm-derived structure7.92e-4195
ectoderm7.92e-4195
presumptive ectoderm7.92e-4195
regional part of nervous system6.18e-4054
neural tube5.97e-3852
neural rod5.97e-3852
future spinal cord5.97e-3852
neural keel5.97e-3852
ecto-epithelium1.75e-3473
brain1.71e-3347
future brain1.71e-3347
pre-chordal neural plate9.43e-3349
regional part of brain1.35e-3246
anterior neural tube1.09e-2940
regional part of forebrain8.82e-2939
forebrain8.82e-2939
future forebrain8.82e-2939
gray matter5.31e-2834
structure with developmental contribution from neural crest4.32e-2692
brain grey matter7.75e-2429
regional part of telencephalon7.75e-2429
telencephalon7.75e-2429
cerebral cortex2.31e-1721
cerebral hemisphere2.31e-1721
pallium2.31e-1721
regional part of cerebral cortex1.07e-1417
occipital lobe2.71e-1010
visual cortex2.71e-1010
neocortex2.71e-1010
posterior neural tube2.29e-0812
chordal neural plate2.29e-0812
tube2.32e-08114
basal ganglion1.43e-078
nuclear complex of neuraxis1.43e-078
aggregate regional part of brain1.43e-078
collection of basal ganglia1.43e-078
cerebral subcortex1.43e-078
anatomical conduit8.71e-07122
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