Personal tools

FFCP PHASE1:Mm9::chr8:81923350..81923361,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chr8:81923350..81923361,- |short_description=p3@Smad1 |description=CAGE_peak_3_at_Smad1_5end |association_with_transcript=5bp_to_NM_008539,uc009mip.1,uc009miq.1...")
 
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr8:81923350..81923361,-
|DHSsupport=NA
|short_description=p3@Smad1
|DPIdataset=NA
|description=CAGE_peak_3_at_Smad1_5end
|association_with_transcript=5bp_to_NM_008539,uc009mip.1,uc009miq.1,uc012ggl.1_5end
|EntrezGene=17125
|EntrezGene=17125
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=P70340,Q0VER3
|UniProt=P70340,Q0VER3
|association_with_transcript=5bp_to_NM_008539,uc009mip.1,uc009miq.1,uc012ggl.1_5end
|cluster_id=chr8:81923350..81923361,-
|description=CAGE_peak_3_at_Smad1_5end
|id=chr8:81923350..81923361,-
|ontology_enrichment_celltype=CL:0000055!9.47e-08!50;CL:0002319!2.79e-07!43;CL:0000221!6.40e-07!44;CL:0000133!6.40e-07!44;CL:0002321!9.93e-07!70;CL:0000220!9.93e-07!70
|ontology_enrichment_celltype_v019_2=CL:0002319,2.73e-07,43;CL:0000221,6.28e-07,44;CL:0000133,6.28e-07,44;CL:0002321,9.26e-07,70
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!1.59e-08!102;UBERON:0000924!1.59e-08!102;UBERON:0006601!1.59e-08!102;UBERON:0000468!8.31e-07!333
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.65e-08,95;UBERON:0000924,1.65e-08,95;UBERON:0006601,1.65e-08,95
|phase1_expression=1.92178616525753,2.44282785347553,3.63999391511629,4.23449895829562,3.00537437967808,2.35030980676646,5.13947809310157,1.93684985162364,2.53419699873,3.04283884218592,0.68487187290202,0.717949430958028,2.22560948910567,1.31130603628496,0.333109761815663,0.202475267389826,0,1.57731082679119,0.685572168028694,0.84877930359606,1.87095238332354,0,0,1.75991665072747,1.14704640533585,2.8711598205751,3.87685796543167,2.37018355954478,2.47030445293286,2.26827116783938,1.77384408524244,0,0,0,3.17736781726402,1.49611180822643,3.47087905646027,0.837063261473815,0,1.0470474879476,0.588231488031014,0.683045484958446,0.971020706062307,1.1330713617802,2.73717714292689,2.9367480345869,6.25913075478431,4.36050312760893,2.85592037554813,3.88859798148567,3.91961980551015,4.31257693094915,1.00669563634642,0,1.00828139742739,6.17422646486273,4.29800159908135,4.12537673821954,7.08107613008592,4.7609188134483,7.60597684207415,4.40497891689872,3.55717918444456,1.7997994345628,0,1.4209602298922,3.59520132622086,4.2264013585371,4.45865332926454,3.64516033495565,2.94454945891935,4.85606673486466,2.65042249141936,6.1245399607477,4.60058260887535,4.5960939330501,1.10115880999389,2.68143409978894,1.84327839907492,6.98997324970027,6.58711033937349,6.25096044668112,1.67509799400829,2.8138130501584,1.83357897332172,5.89257170947335,3.13217697758026,3.91438836233131,1.74170244666323,1.73814588245607,5.2175607966302,2.58127163094416,7.47968467078526,1.07940638327563,0.649776417447669,0.448026887097336,1.82577746171277,1.87473354835864,1.03914401841148,2.12003744706204,1.83096445709685,2.56652954828636,2.54805239706646,7.11066703153331,1.73192832808971,2.02687892380079,1.51657333504435,2.16949371466214,3.6251303710604,2.9688427812965,2.25530924795977,3.34912026143355,2.7673859670727,2.71300752994721,3.41007250693544,2.13633205260448,2.71914464507811,2.16899035379867,2.65383165584962,2.26473589926373,2.20841518460394,0.969750506270444,1.86391761218122,2.34224637609238,3.14170060220183,2.55457055208591,1.1981512450592,1.19980546198682,1.01656181658452,1.49790639404823,2.74500361691176,4.39790232395025,1.73824320192276,2.04572365864264,3.32460871295296,2.43361894601636,3.86989582631202,3.23458123586242,4.0435641349388,3.78795340595653,3.77349284591841,2.06911893990126,4.14142898552303,3.91832526372859,2.72145996605311,4.09963904911519,3.46696380870997,4.39795730256327,2.37124792226126,4.16033376369202,3.16712023495108,2.84954452155847,6.11703948296315,2.78601733217733,5.76189981942242,2.18937693500343,0.702213187313235,1.28673953557358,0.852490498186778,2.89976081549703,1.64168241986767,1.08037236876609,2.60419209143731,2.95146347621106,1.54267112887378,1.86027155800326,1.07309360559848,2.91913355917924,1.97471819896177,2.29834449710733,3.08061476274252,1.75439984910399,5.26920276698522,2.14730270016595,2.10289948564127,5.14523061896422,2.31293148088659,1.85115396664481,1.91959425481711,2.55460339046482,3.73715637834071,3.42861991859682,2.66853652613844,1.90225626112559,3.79623249235609,2.30578536613615,3.2673577144035,2.78539060857611,2.53453313254856,3.59527763461689,2.80979464837102,1.99141273254367,3.41402221715547,2.74196430263349,2.25415471346161,2.64746726198909,1.74557238450863,1.68325967736765,2.33975187359752,1.03327103585722,1.41298855057237,1.48076596706161,1.48226313543574,0.500535317148282,0.982794975566015,0.449724224769707,1.01430060694251,1.20588579876208,1.01850340712568,0.863088412352432,1.29708181420028,0.823684239564244,2.87536413054709,0.744281895337007,0.936113019343682,2.77836765741823,1.07638448113147,1.92977408545347,2.95605104266567,3.60033682363921,4.07412441105065,4.07388205860452,3.05097322775053,3.85264392116176,5.71304738126433,3.51240566144038,3.31033802623001,3.32197034473162,3.6674596791222,2.94953966488328,3.28101465545202,3.03763023021174,1.50791283939272,1.63171705145613,2.95058563811422,2.48343071674259,2.40825884981688,2.81308047821288,3.60656879828686,3.02965112645248,3.15508219416257,2.34263246577983,4.09304455692318,3.58453196928828,4.23317480756549,3.11384183867716,2.83367491172426,4.38383786866968,2.76701444562566,2.89189184779626,4.25820255624806,3.5613120733451,5.21238269931443,5.77395430403874,1.32745138339963,1.69946445308487,2.72091201268276,2.45186603682668,3.2483208216885,2.15204603560749,4.39328098385976,3.27180356529755,2.13898427030833,4.10847785316561,2.10837217149998,5.15677716240934,4.42571487479924,1.98067203434441,2.58717367565509,1.07168517515796,3.72414490648775,3.56737635204141,3.45552943264454,3.65357938937519,1.40803024838226,1.90648863777438,4.6310963591542,6.43056386471772,6.13564821444441,4.22190474497091,4.65552141612232,5.58079059133208,2.33184669303881,2.22510362412612,1.02522528478712,3.09580301944834,1.29636169158798,0.753473828018764,0.546776910884101,0.457556346413045,1.01987057996313,1.81936888020755,1.65839968565309,4.77335309007557,2.05618395827738,2.84647253977588,3.67218158794124,2.71814784818809,1.52853794622324,2.83215127408124,3.47144514046411,4.4498510137285,0.90730481304255,1.86401793926078,0,1.64468200648377,1.48912641411388,3.50012139019286,2.32487682259916,0.506868376472335,2.58185925020659,1.95306577265925,2.20204623293993,0.483168241652012,0.576060012515731,3.16011120628178,0.810900861160657,1.23253148597793,1.29920822977795,2.50637373934474,0.993406773906324,1.08175904567972,2.06765338044408,0.807731599585181,1.67654974641,2.01652370273681,2.63136277997332,1.05833025804362,1.75315353272353,3.17422537061296,0.887943813496259,1.16628013592318,0.671538465456314,4.63655025677257,3.19060208267009,6.22715522508701,2.78678892802786,5.517293144389,5.0827665835536,1.84130094602871,1.71868654031819,2.40594455281163,4.7955776383945,0,1.35004500046361,1.80128481289688,2.71885445390523,1.03552062350364,4.15149390336707,1.19707462020309,3.41467211508268,2.43106717068294,3.35381060204772,3.12533964365024,3.33370091702423,2.67845574410562,2.56735367673452,3.03236654116557,3.8021894983536,3.58390048633545,3.7456602987953,3.20125762024346,4.07791829584854,2.38146845641537,4.05595140806994,1.73618298417335,2.88460130562315,4.85756436443511,2.05721551431249,3.19456451086807,3.81497903915713,2.90692833264657,4.14081273827455,2.45382362885862,6.0366231048015,3.6829759601298,2.03706170768793,2.80571135828869,4.1522256343461,3.34915240076916,2.86461730218783,2.47898945897546,2.89359916471712,3.74715866906919,5.6143586026898,2.57845264857958,4.97349663378993,3.75005412503176,3.2461496986859
|phase1_expression=1.92178616525753,2.44282785347553,3.63999391511629,4.23449895829562,3.00537437967808,2.35030980676646,5.13947809310157,1.93684985162364,2.53419699873,3.04283884218592,0.68487187290202,0.717949430958028,2.22560948910567,1.31130603628496,0.333109761815663,0.202475267389826,0,1.57731082679119,0.685572168028694,0.84877930359606,1.87095238332354,0,0,1.75991665072747,1.14704640533585,2.8711598205751,3.87685796543167,2.37018355954478,2.47030445293286,2.26827116783938,1.77384408524244,0,0,0,3.17736781726402,1.49611180822643,3.47087905646027,0.837063261473815,0,1.0470474879476,0.588231488031014,0.683045484958446,0.971020706062307,1.1330713617802,2.73717714292689,2.9367480345869,6.25913075478431,4.36050312760893,2.85592037554813,3.88859798148567,3.91961980551015,4.31257693094915,1.00669563634642,0,1.00828139742739,6.17422646486273,4.29800159908135,4.12537673821954,7.08107613008592,4.7609188134483,7.60597684207415,4.40497891689872,3.55717918444456,1.7997994345628,0,1.4209602298922,3.59520132622086,4.2264013585371,4.45865332926454,3.64516033495565,2.94454945891935,4.85606673486466,2.65042249141936,6.1245399607477,4.60058260887535,4.5960939330501,1.10115880999389,2.68143409978894,1.84327839907492,6.98997324970027,6.58711033937349,6.25096044668112,1.67509799400829,2.8138130501584,1.83357897332172,5.89257170947335,3.13217697758026,3.91438836233131,1.74170244666323,1.73814588245607,5.2175607966302,2.58127163094416,7.47968467078526,1.07940638327563,0.649776417447669,0.448026887097336,1.82577746171277,1.87473354835864,1.03914401841148,2.12003744706204,1.83096445709685,2.56652954828636,2.54805239706646,7.11066703153331,1.73192832808971,2.02687892380079,1.51657333504435,2.16949371466214,3.6251303710604,2.9688427812965,2.25530924795977,3.34912026143355,2.7673859670727,2.71300752994721,3.41007250693544,2.13633205260448,2.71914464507811,2.16899035379867,2.65383165584962,2.26473589926373,2.20841518460394,0.969750506270444,1.86391761218122,2.34224637609238,3.14170060220183,2.55457055208591,1.1981512450592,1.19980546198682,1.01656181658452,1.49790639404823,2.74500361691176,4.39790232395025,1.73824320192276,2.04572365864264,3.32460871295296,2.43361894601636,3.86989582631202,3.23458123586242,4.0435641349388,3.78795340595653,3.77349284591841,2.06911893990126,4.14142898552303,3.91832526372859,2.72145996605311,4.09963904911519,3.46696380870997,4.39795730256327,2.37124792226126,4.16033376369202,3.16712023495108,2.84954452155847,6.11703948296315,2.78601733217733,5.76189981942242,2.18937693500343,0.702213187313235,1.28673953557358,0.852490498186778,2.89976081549703,1.64168241986767,1.08037236876609,2.60419209143731,2.95146347621106,1.54267112887378,1.86027155800326,1.07309360559848,2.91913355917924,1.97471819896177,2.29834449710733,3.08061476274252,1.75439984910399,5.26920276698522,2.14730270016595,2.10289948564127,5.14523061896422,2.31293148088659,1.85115396664481,1.91959425481711,2.55460339046482,3.73715637834071,3.42861991859682,2.66853652613844,1.90225626112559,3.79623249235609,2.30578536613615,3.2673577144035,2.78539060857611,2.53453313254856,3.59527763461689,2.80979464837102,1.99141273254367,3.41402221715547,2.74196430263349,2.25415471346161,2.64746726198909,1.74557238450863,1.68325967736765,2.33975187359752,1.03327103585722,1.41298855057237,1.48076596706161,1.48226313543574,0.500535317148282,0.982794975566015,0.449724224769707,1.01430060694251,1.20588579876208,1.01850340712568,0.863088412352432,1.29708181420028,0.823684239564244,2.87536413054709,0.744281895337007,0.936113019343682,2.77836765741823,1.07638448113147,1.92977408545347,2.95605104266567,3.60033682363921,4.07412441105065,4.07388205860452,3.05097322775053,3.85264392116176,5.71304738126433,3.51240566144038,3.31033802623001,3.32197034473162,3.6674596791222,2.94953966488328,3.28101465545202,3.03763023021174,1.50791283939272,1.63171705145613,2.95058563811422,2.48343071674259,2.40825884981688,2.81308047821288,3.60656879828686,3.02965112645248,3.15508219416257,2.34263246577983,4.09304455692318,3.58453196928828,4.23317480756549,3.11384183867716,2.83367491172426,4.38383786866968,2.76701444562566,2.89189184779626,4.25820255624806,3.5613120733451,5.21238269931443,5.77395430403874,1.32745138339963,1.69946445308487,2.72091201268276,2.45186603682668,3.2483208216885,2.15204603560749,4.39328098385976,3.27180356529755,2.13898427030833,4.10847785316561,2.10837217149998,5.15677716240934,4.42571487479924,1.98067203434441,2.58717367565509,1.07168517515796,3.72414490648775,3.56737635204141,3.45552943264454,3.65357938937519,1.40803024838226,1.90648863777438,4.6310963591542,6.43056386471772,6.13564821444441,4.22190474497091,4.65552141612232,5.58079059133208,2.33184669303881,2.22510362412612,1.02522528478712,3.09580301944834,1.29636169158798,0.753473828018764,0.546776910884101,0.457556346413045,1.01987057996313,1.81936888020755,1.65839968565309,4.77335309007557,2.05618395827738,2.84647253977588,3.67218158794124,2.71814784818809,1.52853794622324,2.83215127408124,3.47144514046411,4.4498510137285,0.90730481304255,1.86401793926078,0,1.64468200648377,1.48912641411388,3.50012139019286,2.32487682259916,0.506868376472335,2.58185925020659,1.95306577265925,2.20204623293993,0.483168241652012,0.576060012515731,3.16011120628178,0.810900861160657,1.23253148597793,1.29920822977795,2.50637373934474,0.993406773906324,1.08175904567972,2.06765338044408,0.807731599585181,1.67654974641,2.01652370273681,2.63136277997332,1.05833025804362,1.75315353272353,3.17422537061296,0.887943813496259,1.16628013592318,0.671538465456314,4.63655025677257,3.19060208267009,6.22715522508701,2.78678892802786,5.517293144389,5.0827665835536,1.84130094602871,1.71868654031819,2.40594455281163,4.7955776383945,0,1.35004500046361,1.80128481289688,2.71885445390523,1.03552062350364,4.15149390336707,1.19707462020309,3.41467211508268,2.43106717068294,3.35381060204772,3.12533964365024,3.33370091702423,2.67845574410562,2.56735367673452,3.03236654116557,3.8021894983536,3.58390048633545,3.7456602987953,3.20125762024346,4.07791829584854,2.38146845641537,4.05595140806994,1.73618298417335,2.88460130562315,4.85756436443511,2.05721551431249,3.19456451086807,3.81497903915713,2.90692833264657,4.14081273827455,2.45382362885862,6.0366231048015,3.6829759601298,2.03706170768793,2.80571135828869,4.1522256343461,3.34915240076916,2.86461730218783,2.47898945897546,2.89359916471712,3.74715866906919,5.6143586026898,2.57845264857958,4.97349663378993,3.75005412503176,3.2461496986859
|short_description=p3@Smad1
}}
}}

Latest revision as of 19:42, 25 September 2015

Short description:p3@Smad1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Smad1_5end
Coexpression cluster:NA
Association with transcript: 5bp_to_NM_008539, uc009mip.1, uc009miq.1, uc012ggl.1_5end
EntrezGene:Smad1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Smad1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.92
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I63.64
CD326+ enterocyte, pool1.CNhs13542.11848-124I34.23
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.35
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I85.14
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.94
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.53
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.04
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.68
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.72
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.23
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.31
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.58
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.69
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.87
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.76
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.15
GP2+ M cell, pool1.CNhs13228.11845-124H92.87
GP2+ M cell, pool2.CNhs13231.11846-124I13.88
GP2+ M cell, pool3.CNhs13240.11847-124I22.37
Ileum epithelium, pool1.CNhs13199.10252-104B92.47
Ileum epithelium, pool2.CNhs13232.10253-104C12.27
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F53.18
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.47
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.74
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.94
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B76.26
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C24.36
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.86
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.89
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.92
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.01
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.01
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C16.17
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E14.30
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C54.13
Mouse Granule cells, donor1.CNhs12131.11713-123C37.08
Mouse Granule cells, donor2.CNhs12357.11731-123E34.76
Mouse Granule cells, donor3.CNhs12108.11636-122C77.61
Mouse Meningeal cells, donor1.CNhs12132.11716-123C64.40
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C83.60
Mouse Microglia, donor2.CNhs12634.11736-123E84.23
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.46
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.65
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.94
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.65
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D26.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.60
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.68
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.84
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D46.99
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.59
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D86.25
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.83
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.89
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.13
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.91
Mouse Schwann, donor1.CNhs12507.11728-123D91.74
Mouse Schwann, donor2.CNhs12573.11746-123F91.74
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G35.22
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C47.48
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.83
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.87
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.12
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.83
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.73
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.03
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.17
accessory axillary lymph node, adult.CNhs10475.1063-29H93.63
adrenal gland, adult.CNhs10508.49-24D72.97
adrenal gland, embryo E14.CNhs11038.406-44C52.26
adrenal gland, embryo E16.CNhs11004.1254-43D63.35
adrenal gland, embryo E17.CNhs11043.1263-45I12.77
adrenal gland, embryo E18.CNhs11026.1262-18F52.71
adrenal gland, neonate N00.CNhs11191.1311-23C13.41
adrenal gland, neonate N25.CNhs11223.1377-27I32.14
amnion, adult pregnant day17.5.CNhs10488.583-22A82.72
aorta, adult.CNhs10498.46-23H12.17
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F52.26
bone (os femoris), neonate N16.CNhs11225.1525-43A62.21
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B22.34
cerebellum, neonate N30.CNhs11135.1395-42I23.14
colon, adult.CNhs10468.36-18H72.55
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.20
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.02
corpora quadrigemina, adult.CNhs10501.16-22A41.50
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F14.40
cortex, adult.CNhs10473.12-14D51.74
cortex, neonate N30.CNhs11107.1392-42F22.05
diencephalon, adult.CNhs10482.20-12F23.32
diencephalon, neonate N30.CNhs11201.1388-42B22.43
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.87
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.23
epididymis, adult.CNhs10490.58-23B24.04
eyeball, adult.CNhs10484.31-12G43.79
eyeball, embryo E12.CNhs11016.345-16C63.77
eyeball, embryo E14.CNhs10521.399-16E22.07
eyeball, embryo E15.CNhs10593.426-16C94.14
eyeball, embryo E17.CNhs11023.1261-18D43.92
eyeball, neonate N00.CNhs11207.633-15C62.72
eyeball, neonate N01.CNhs11140.1532-43E74.10
eyeball, neonate N02.CNhs11205.1551-44G83.47
eyeball, neonate N16.CNhs11188.777-19A24.40
forelimb, embryo E11.CNhs10596.335-25E22.37
forelimb, embryo E12.CNhs10600.359-14H24.16
forelimb, embryo E13.CNhs10589.384-1E23.17
forelimb, embryo E14.CNhs10577.413-26A82.85
forelimb, embryo E15.CNhs11007.437-20E76.12
forelimb, embryo E17.CNhs10598.1517-43C42.79
forelimb, embryo E18.CNhs11008.1520-43B55.76
gonad, embryo E13.CNhs11044.1564-45I62.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.29
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.85
heart, embryo E11.CNhs10586.331-24E92.90
heart, embryo E12.CNhs11015.353-12F51.64
heart, embryo E13.CNhs11013.376-3I91.08
heart, embryo E14.CNhs10597.403-26D42.60
heart, embryo E15.CNhs11017.431-16C82.95
heart, embryo E16.CNhs11021.457-17C61.54
heart, embryo E17.CNhs11025.479-18E51.86
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E32.92
heart, neonate N03.CNhs11221.1349-25I21.97
heart, neonate N10.CNhs11118.749-24G12.30
heart, neonate N16.CNhs11209.782-15G13.08
heart, neonate N20.CNhs11127.821-26I61.75
heart, neonate N25.CNhs11196.1351-25D35.27
heart, neonate N30.CNhs11202.1390-42D22.15
hippocampus, adult.CNhs10478.13-16E82.10
hippocampus, neonate N00.CNhs11228.627-43G15.15
intestinal mucosa, adult.CNhs10506.860-29I32.31
intestine, adult.CNhs10496.178-9A31.85
intestine, embryo E12.CNhs11019.1251-16I51.92
intestine, embryo E13.CNhs11010.381-16D52.55
intestine, embryo E15.CNhs10602.976-16D83.74
intestine, embryo E16.CNhs10585.463-22H43.43
intestine, embryo E17.CNhs10582.482-18D32.67
intestine, embryo E18.CNhs10526.1289-20F71.90
intestine, neonate N00.CNhs11126.644-26D13.80
intestine, neonate N01.CNhs11192.1322-23E92.31
intestine, neonate N06.CNhs11102.688-20B83.27
intestine, neonate N07.CNhs11095.720-20F22.79
intestine, neonate N10.CNhs11098.755-23A52.53
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E32.81
intestine, neonate N30.CNhs11131.1384-42G11.99
kidney, embryo E14.CNhs10606.411-4I93.41
kidney, embryo E15.CNhs10997.434-16F82.74
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I22.65
kidney, embryo E18.CNhs11001.1288-20C71.75
kidney, neonate N00.CNhs11214.646-21G71.68
kidney, neonate N10.CNhs11206.758-6D52.34
kidney, neonate N20.CNhs11113.832-19I11.03
kidney, neonate N25.CNhs11122.1353-25F31.41
kidney, neonate N30.CNhs11203.1385-42H11.48
liver, adult pregnant day01.CNhs10466.508-5B21.48
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.98
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D71.01
liver, embryo E16.CNhs10523.462-17F51.21
liver, embryo E17.CNhs10510.481-18A31.02
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F41.30
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A32.78
liver, neonate N25.CNhs11198.1368-26H11.08
liver, neonate N30.CNhs11106.1382-42D11.93
lung, adult.CNhs10474.28-22B12.96
lung, embryo E12.CNhs10522.354-16G23.60
lung, embryo E14.CNhs10604.404-26F84.07
lung, embryo E15.CNhs11020.432-17C54.07
lung, embryo E16.CNhs10998.458-17B63.05
lung, embryo E17.CNhs10605.480-44A63.85
lung, embryo E18.CNhs10583.1287-20I65.71
lung, neonate N00.CNhs11224.640-42C63.51
lung, neonate N06.CNhs11212.683-20E53.31
lung, neonate N07.CNhs11111.715-19A33.32
lung, neonate N10.CNhs11219.750-23E63.67
lung, neonate N20.CNhs11109.822-18A42.95
lung, neonate N25.CNhs11119.1359-25C73.28
lung, neonate N30.CNhs11133.1394-42H23.04
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.63
mammary gland, adult lactating day02.CNhs10480.595-22B62.95
mammary gland, adult pregnant day19.CNhs10476.588-5H22.48
medulla oblongata, adult.CNhs10477.17-12C22.41
medulla oblongata, neonate N30.CNhs11200.1396-42A32.81
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C73.61
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.03
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.16
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.34
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.09
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.58
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.23
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.11
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.83
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.38
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.77
olfactory brain, adult.CNhs10489.18-22I92.89
ovary, adult.CNhs10507.91-2I74.26
ovary, embryo E18.CNhs11040.505-44H73.56
ovary, neonate N00.CNhs11217.1299-22I45.21
oviduct, adult pregnant day01.CNhs10500.988-6G65.77
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F41.70
pancreas, embryo E15.CNhs11042.1556-45F22.72
pancreas, embryo E16.CNhs11003.460-26E52.45
pancreas, embryo E17.CNhs10599.1558-45G33.25
pancreas, embryo E18.CNhs10580.1535-43I72.15
pancreas, neonate N00.CNhs11105.645-26G94.39
pancreas, neonate N01.CNhs11138.1531-43D73.27
pancreas, neonate N02.CNhs11139.1539-43D82.14
pancreas, neonate N16.CNhs11136.787-43B64.11
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H55.16
pituitary gland, adult.CNhs10493.21-1G84.43
pituitary gland, embryo E12.CNhs11018.346-16E61.98
pituitary gland, embryo E13.CNhs11009.370-44C72.59
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B93.72
pituitary gland, embryo E16.CNhs11036.449-43F63.57
pituitary gland, embryo E17.CNhs11039.1265-44F53.46
pituitary gland, neonate N00.CNhs11190.1308-22E93.65
placenta, adult pregnant day10.CNhs10472.539-13I71.41
placenta, adult pregnant day17.CNhs10464.577-18G31.91
prostate, adult.CNhs10470.859-1F84.63
skin, adult.CNhs10492.30-1C36.43
skin, neonate N00.CNhs11124.650-25G46.14
skin, neonate N03.CNhs11215.662-22H34.22
skin, neonate N06.CNhs11097.693-20I54.66
skin, neonate N10.CNhs11108.762-6C45.58
small intestine, neonate N16.CNhs11114.790-21I12.33
spinal cord, adult.CNhs10505.24-13C92.23
spleen, adult.CNhs10465.25-2G21.03
spleen, embryo E16.CNhs11035.461-43C13.10
spleen, embryo E18.CNhs11011.1271-21F21.30
spleen, neonate N10.CNhs11116.752-24D10.75
spleen, neonate N20.CNhs11112.824-19H10.55
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.02
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.82
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.66
stomach, adult.CNhs10503.33-1H64.77
stomach, embryo E12.CNhs10588.356-43E32.06
stomach, embryo E15.CNhs10603.1252-16G82.85
stomach, embryo E16.CNhs11022.459-17D43.67
stomach, embryo E17.CNhs11006.1035-18D52.72
stomach, embryo E18.CNhs10999.1286-20C61.53
stomach, neonate N03.CNhs11193.1340-24B82.83
stomach, neonate N07.CNhs11210.718-18A93.47
stomach, neonate N25.CNhs11104.1355-25E44.45
stomach, neonate N30.CNhs11134.1386-42I10.91
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.64
testis, embryo E15.CNhs11034.443-27C51.49
testis, embryo E16.CNhs11033.470-26G53.50
testis, embryo E17.CNhs11029.486-18I52.32
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B72.58
testis, neonate N07.CNhs11222.726-26I41.95
testis, neonate N10.CNhs11204.763-44D92.20
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B53.16
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I21.23
thymus, embryo E16.CNhs11002.456-26C51.30
thymus, embryo E17.CNhs10581.478-18C12.51
thymus, embryo E18.CNhs10595.1273-19G40.99
thymus, neonate N02.CNhs11181.1541-43F81.08
thymus, neonate N03.CNhs11137.2104-43C72.07
thymus, neonate N06.CNhs11197.681-26C40.81
thymus, neonate N07.CNhs11211.713-19D31.68
thymus, neonate N10.CNhs11194.748-24E42.02
thymus, neonate N20.CNhs11186.820-7A22.63
thymus, neonate N25.CNhs11125.1362-25G71.06
thymus, neonate N30.CNhs11132.1393-42G21.75
tongue, adult.CNhs10499.32-1B43.17
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.89
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.17
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.67
urinary bladder, adult.CNhs10481.879-12E44.64
uterus, adult pregnant day19.CNhs10497.590-15F53.19
uterus, adult.CNhs10509.92-27E56.23
vagina, adult.CNhs10502.89-27D52.79
vesicular gland, adult.CNhs10491.51-27F85.52
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.08
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.41
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.80
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I84.15
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H23.41
whole body, embryo E14.5.CNhs10578.420-27D22.43
whole body, embryo E14.CNhs10519.395-14B13.35
whole body, embryo E16.CNhs10514.453-14F23.13
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.68
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.57
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.03
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.80
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.58
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.20
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.08
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.06
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.86
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.19
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.91
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.14
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G56.04
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.04
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.15
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.35
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.48
whole body, embryo E17.5.CNhs10513.490-9F92.89
whole body, embryo E17.CNhs10517.475-3I53.75
whole body, embryo E18.CNhs10516.493-3B35.61
whole body, neonate N00.CNhs10525.657-19C22.58
whole body, neonate N01.CNhs10576.659-23C64.97
whole body, neonate N06.CNhs10515.692-21D13.75
whole body, neonate N10.CNhs10518.761-6B43.25





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neural cell2.73e-0743
ectodermal cell6.28e-0744
neurectodermal cell6.28e-0744
embryonic cell9.26e-0770

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure1.65e-0895
ectoderm1.65e-0895
presumptive ectoderm1.65e-0895
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr8:81923350..81923361,-&oldid=4210316"