FFCP PHASE1:Mm9::chrX:137077608..137077619,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:137077608..137077619,-
|short_description=p6@Tsc22d3
|description=CAGE_peak_6_at_Tsc22d3_5end
|association_with_transcript=20bp_to_ENSMUST00000133023_5end
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=14605 | |EntrezGene=14605 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1178 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=20bp_to_ENSMUST00000133023_5end | |||
|cluster_id=chrX:137077608..137077619,- | |||
|description=CAGE_peak_6_at_Tsc22d3_5end | |||
|id=chrX:137077608..137077619,- | |||
|ontology_enrichment_celltype=CL:0000219!4.84e-12!54;CL:0002320!1.71e-08!46;CL:0000134!1.71e-08!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0000219,2.89e-21,54;CL:0002320,4.00e-16,46;CL:0000134,4.00e-16,46;CL:0000988,9.07e-13,32;CL:0002032,9.07e-13,32;CL:0000037,9.07e-13,32;CL:0000837,9.07e-13,32;CL:0000034,3.70e-11,97;CL:0000723,1.26e-09,91;CL:0000048,1.26e-09,91;CL:0000791,1.05e-07,9;CL:0000789,1.05e-07,9;CL:0002420,1.05e-07,9;CL:0002419,1.05e-07,9;CL:0000790,1.05e-07,9;CL:0000049,1.73e-07,19;CL:0000838,3.21e-07,12;CL:0002031,4.42e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.71e-08!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.00e-16,46;UBERON:0002204,3.05e-10,32;UBERON:0002371,3.25e-07,16 | |||
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| ||
|short_description=p6@Tsc22d3 | |||
}} | }} |
Latest revision as of 15:35, 1 October 2015
Short description: | p6@Tsc22d3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Tsc22d3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1178 |
Association with transcript: | 20bp_to_ENSMUST00000133023_5end |
EntrezGene: | Tsc22d3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
motile cell | 2.89e-21 | 54 |
connective tissue cell | 4.00e-16 | 46 |
mesenchymal cell | 4.00e-16 | 46 |
hematopoietic cell | 9.07e-13 | 32 |
hematopoietic oligopotent progenitor cell | 9.07e-13 | 32 |
hematopoietic stem cell | 9.07e-13 | 32 |
hematopoietic multipotent progenitor cell | 9.07e-13 | 32 |
stem cell | 3.70e-11 | 97 |
somatic stem cell | 1.26e-09 | 91 |
multi fate stem cell | 1.26e-09 | 91 |
mature alpha-beta T cell | 1.05e-07 | 9 |
alpha-beta T cell | 1.05e-07 | 9 |
immature T cell | 1.05e-07 | 9 |
mature T cell | 1.05e-07 | 9 |
immature alpha-beta T cell | 1.05e-07 | 9 |
common myeloid progenitor | 1.73e-07 | 19 |
lymphoid lineage restricted progenitor cell | 3.21e-07 | 12 |
hematopoietic lineage restricted progenitor cell | 4.42e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 4.00e-16 | 46 |
musculoskeletal system | 3.05e-10 | 32 |
bone marrow | 3.25e-07 | 16 |