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{{f5samples
{{f5samples
|id=FF:11678-122H4
|DRA_sample_Accession=CAGE@SAMD00005666
|name=Renal Epithelial Cells, donor3
|accession_numbers=CAGE;DRX008429;DRR009301;DRZ000726;DRZ002111;DRZ012076;DRZ013461
|sample_id=11678
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0002113,UBERON:0002100,UBERON:0000483,UBERON:0000479,UBERON:0000064,UBERON:0000062,UBERON:0004111,UBERON:0000475,UBERON:0006555,UBERON:0006554,UBERON:0000061,UBERON:0000465,UBERON:0003914,UBERON:0000025,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0000119,UBERON:0003103,UBERON:0009569,UBERON:0004211,UBERON:0009773,UBERON:0000489,UBERON:0005177,UBERON:0005172,UBERON:0001231,UBERON:0004819,UBERON:0005173,UBERON:0004810,UBERON:0001285,UBERON:0011143,UBERON:0001008,UBERON:0002417,UBERON:0007684,UBERON:0000916
|rna_tube_id=122H4
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000066,CL:0002371,CL:0000255,CL:1000497,CL:0002518,CL:1000449,CL:1000507,CL:1000494
|rna_box=122
|rna_position=H4
|sample_cell_lot=
|sample_cell_catalog=
|sample_company=Sciencell/3H
|rna_lot_number=2265
|rna_catalog_number=SC4125
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=
|sample_tissue=kidney
|sample_donor(cell lot)=
|sample_sex=
|sample_age=
|sample_ethnicity=
|rna_rin=
|rna_od260/230=
|rna_od260/280=
|sample_cell_type=epithelial cell of kidney
|sample_cell_line=
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_experimental_condition=
|sample_disease=
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-ethanol-v1.0
|rna_weight_ug=10
|rna_concentration=0.38
|sample_note=
|profile_hcage=CNhs12732,LSID960,release012,COMPLETED
|profile_cagescan=,,,
|profile_srnaseq=,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000063,CL:0000066,CL:0000144,CL:0000255,CL:0000548,CL:0002371,CL:0002518,CL:1000494,CL:1000497,CL:1000507
|ancestors_in_anatomy_facet=UBERON:0000025,UBERON:0000058,UBERON:0000061,UBERON:0000062,UBERON:0000064,UBERON:0000080,UBERON:0000083,UBERON:0000119,UBERON:0000464,UBERON:0000465,UBERON:0000466,UBERON:0000467,UBERON:0000468,UBERON:0000475,UBERON:0000477,UBERON:0000479,UBERON:0000480,UBERON:0000481,UBERON:0000483,UBERON:0000489,UBERON:0000916,UBERON:0000922,UBERON:0000923,UBERON:0000926,UBERON:0001008,UBERON:0001062,UBERON:0001231,UBERON:0001285,UBERON:0002050,UBERON:0002100,UBERON:0002113,UBERON:0002120,UBERON:0002417,UBERON:0002532,UBERON:0002553,UBERON:0003060,UBERON:0003064,UBERON:0003074,UBERON:0003081,UBERON:0003103,UBERON:0003104,UBERON:0003220,UBERON:0003886,UBERON:0003887,UBERON:0003914,UBERON:0003918,UBERON:0004111,UBERON:0004120,UBERON:0004211,UBERON:0004810,UBERON:0004819,UBERON:0004875,UBERON:0004876,UBERON:0005095,UBERON:0005103,UBERON:0005172,UBERON:0005173,UBERON:0005177,UBERON:0005256,UBERON:0005291,UBERON:0005423,UBERON:0005721,UBERON:0005754,UBERON:0006553,UBERON:0006554,UBERON:0006555,UBERON:0007684,UBERON:0007687,UBERON:0009142,UBERON:0009201
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000151
|comment=
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|expression_enrichment_score=chr17:36105042..36105060,-!p1@HNF1B!1.95!87.92!HNF1B;;chr17:46703687..46703740,-!p1@HOXB9!1.84!68.29!HOXB9;;chr2:114036488..114036504,-!p1@PAX8!1.73!52.14!PAX8;;chr1:201979703..201979721,+!p2@ELF3!1.71!49.71!ELF3;;chr12:66218598..66218645,+!p2@HMGA2!1.66!197.70!HMGA2;;chr17:35294075..35294102,+!p1@ENST00000559335!1.64!42.43!LHX1;;chr17:46682321..46682362,-!p1@HOXB6!1.63!41.27!HOXB6;;chr12:66218255..66218304,+!p3@HMGA2!1.58!96.05!HMGA2;;chr1:201979743..201979762,+!p1@ELF3!1.55!34.83!ELF3;;chr1:209979467..209979494,-!p1@IRF6!1.54!37.37!IRF6;;chr17:46703826..46703845,-!p3@HOXB9!1.53!33.25!HOXB9;;chr7:27205136..27205164,-!p1@HOXA9!1.45!27.44!HOXA9;;chr2:105470562..105470582,+!p@chr2:105470562..105470582,+!1.44!26.60!POU3F3;;chr12:66218183..66218209,+!p4@HMGA2!1.33!38.63!HMGA2;;chr7:27205106..27205134,-!p2@HOXA9!1.29!18.37!HOXA9;;chr7:27153454..27153469,-!p2@HOXA3!1.28!17.84!HOXA3;;chr16:86600426..86600441,+!p1@FOXC2!1.25!41.38!FOXC2;;chr12:66218212..66218244,+!p5@HMGA2!1.25!24.28!HMGA2;;chr11:34642612..34642646,+!p1@EHF!1.21!15.30!EHF;;chr7:27192185..27192209,-!p1@HOXA3!1.20!14.67!HOXA3;;chr3:141043020..141043049,+!p17@ZBTB38!1.19!14.36!ZBTB38;;chr17:46622205..46622218,-!p3@HOXB2!1.18!16.36!HOXB2;;chr3:69811858..69811881,+!p5@MITF!1.18!14.14!MITF;;chr12:66218836..66218888,+!p1@HMGA2!1.16!123.92!HMGA2;;chr3:69811882..69811898,+!p6@MITF!1.16!13.30!MITF;;chr7:27183291..27183324,-!p1@HOXA5!1.14!12.88!HOXA5;;chr7:27183263..27183284,-!p2@HOXA5!1.12!12.03!HOXA5;;chr7:26191809..26191890,+!p1@NFE2L3!1.10!57.42!NFE2L3;;chr12:66218443..66218461,+!p8@HMGA2!1.10!14.88!HMGA2;;chr12:66218378..66218401,+!p6@HMGA2!1.09!17.52!HMGA2;;chr6:50786591..50786614,+!p1@TFAP2B!1.08!11.08!TFAP2B;;chr12:54378923..54378966,+!p1@HOXC10!1.06!10.56!HOXC10;;chr2:177053386..177053402,+!p1@HOXD1!1.06!10.56!HOXD1;;chr7:27224795..27224840,-!p2@HOXA11!1.06!10.45!HOXA11;;chr12:66218003..66218018,+!p9@HMGA2!1.05!12.35!HMGA2;;chr12:66218573..66218596,+!p7@HMGA2!1.04!14.99!HMGA2;;chr17:46688334..46688385,-!p1@HOXB7!1.04!14.57!HOXB7;;chr2:5832508..5832524,+!p1@SOX11!1.03!9.82!SOX11;;chr2:176994408..176994492,+!p1@HOXD8!1.03!9.61!HOXD8;;chr17:46622229..46622257,-!p6@HOXB2!1.02!11.08!HOXB2;;chr7:27224842..27224872,-!p1@HOXA11!1.01!9.29!HOXA11;;chr12:54393880..54393962,+!p1@HOXC9!1.01!9.18!HOXC9;;chr6:10412600..10412637,-!p1@TFAP2A!1.00!15.30!TFAP2A;;chr7:27196217..27196246,-!p2@HOXA7!1.00!9.08!HOXA7;;chr6:34204921..34204939,+!p3@HMGA1!0.99!268.42!HMGA1;;chr3:141043050..141043063,+!p22@ZBTB38!0.99!8.76!ZBTB38;;chr17:46622440..46622477,-!p5@HOXB2!0.97!9.39!HOXB2;;chr20:6748325..6748352,+!p1@BMP2!0.96!11.82!BMP2;;chr6:21597765..21597779,+!p2@SOX4!0.95!66.60!SOX4;;chr6:10415276..10415341,-!p2@TFAP2A!0.94!9.50!TFAP2A;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!0.94!7.71!HOXC5;;chr5:124082322..124082364,-!p1@ZNF608!0.92!19.42!ZNF608;;chr7:27170359..27170381,-!p1@HOXA4!0.92!7.39!HOXA4;;chrY:21906594..21906622,-!p1@KDM5D!0.92!7.28!KDM5D;;chr21:38071430..38071456,+!p1@SIM2!0.91!7.18!SIM2;;chr12:66218420..66218439,+!p12@HMGA2!0.90!6.97!HMGA2;;chr6:34204672..34204692,+!p1@HMGA1!0.89!808.21!HMGA1;;chr5:124082580..124082603,-!p4@ZNF608!0.89!7.81!ZNF608;;chr2:177016336..177016350,+!p1@HOXD4!0.89!6.76!HOXD4;;chr10:102505493..102505546,+!p2@PAX2!0.88!6.54!PAX2;;chr15:83953397..83953425,-!p1@BNC1!0.87!7.39!BNC1;;chr2:176969097..176969109,+!p3@HOXD11!0.86!6.23!HOXD11;;chr11:61520075..61520136,+!p1@C11orf9!0.85!13.51!C11orf9;;chr7:27213893..27213954,-!p1@HOXA10!0.85!6.02!HOXA10;;chr16:86600870..86600921,+!p2@FOXC2!0.83!5.81!FOXC2;;chr16:51185172..51185197,-!p1@SALL1!0.83!5.70!SALL1;;chr19:20278043..20278054,+!p2@ZNF486!0.83!5.70!ZNF486;;chr12:66357214..66357233,+!p13@HMGA2!0.83!5.70!HMGA2;;chr12:54447599..54447630,+!p3@HOXC4!0.82!7.07!HOXC4;;chr2:105470536..105470556,+!p@chr2:105470536..105470556,+!0.82!5.59!POU3F3;;chr6:21593973..21593988,+!p1@SOX4!0.81!212.58!SOX4;;chr17:46675558..46675577,-!p2@HOXB6!0.81!5.38!HOXB6;;chr17:46692457..46692484,-!p2@HOXB8!0.80!5.28!HOXB8;;chr5:2751762..2751784,-!p1@IRX2!0.80!5.28!IRX2;;chr10:119302232..119302265,+!p1@EMX2!0.80!5.28!EMX2;;chr10:119303078..119303169,+!p2@EMX2!0.79!5.17!EMX2;;chr9:20621927..20621996,-!p3@MLLT3!0.78!8.76!MLLT3;;chr5:124082470..124082483,-!p8@ZNF608!0.78!4.96!ZNF608;;chr3:170076314..170076334,+!p2@SKIL!0.77!6.65!SKIL;;chr2:176969179..176969226,+!p2@HOXD11!0.77!4.86!HOXD11;;chr1:209979411..209979433,-!p2@IRF6!0.77!4.86!IRF6;;chr7:64838786..64838809,+!p2@ZNF92!0.76!29.77!ZNF92;;chr17:46703942..46703964,-!p4@HOXB9!0.76!4.75!HOXB9;;chr2:176969228..176969260,+!p1@HOXD11!0.76!4.75!HOXD11;;chr1:151032860..151032918,+!p1@MLLT11!0.75!60.90!MLLT11;;chr12:66218152..66218174,+!p10@HMGA2!0.75!5.07!HMGA2;;chr7:27153428..27153440,-!p3@HOXA3!0.74!4.43!HOXA3;;chr2:5832493..5832507,+!p2@SOX11!0.74!4.43!SOX11;;chr17:46622175..46622186,-!p12@HOXB2!0.74!4.43!HOXB2;;chr17:46622070..46622109,-!p1@HOXB2!0.73!10.56!HOXB2;;chr7:27219833..27219845,-!p7@HOXA10!0.73!4.33!HOXA10;;chr9:20622478..20622525,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|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000066;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002518;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:1000494;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001008;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002113;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0004122
|fonse_cell_line=
|fonse_cell_line=
|fonse_cell_line_closure=
|fonse_cell_line_closure=
Line 66: Line 40:
|fonse_treatment=
|fonse_treatment=
|fonse_treatment_closure=
|fonse_treatment_closure=
|top_motifs=
|has_quality=
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Renal%2520Epithelial%2520Cells%252c%2520donor3.CNhs12732.11678-122H4.hg19.nobarcode.bam
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Renal%2520Epithelial%2520Cells%252c%2520donor3.CNhs12732.11678-122H4.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Renal%2520Epithelial%2520Cells%252c%2520donor3.CNhs12732.11678-122H4.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Renal%2520Epithelial%2520Cells%252c%2520donor3.CNhs12732.11678-122H4.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Renal%2520Epithelial%2520Cells%252c%2520donor3.CNhs12732.11678-122H4.hg38.nobarcode.ctss.bed.gz
|id=FF:11678-122H4
|is_a=EFO:0002091;;FF:0000151
|is_obsolete=
|library_id=CNhs12732
|library_id_phase_based=2:CNhs12732
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11678
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11678
|name=Renal Epithelial Cells, donor3
|namespace=FANTOM5
|part_of=
|profile_cagescan=,,,
|profile_hcage=CNhs12732,LSID960,release012,COMPLETED
|profile_rnaseq=
|profile_srnaseq=,,,
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|rna_box=122
|rna_catalog_number=SC4125
|rna_concentration=0.38
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-ethanol-v1.0
|rna_lot_number=2265
|rna_od260/230=
|rna_od260/280=
|rna_position=H4
|rna_rin=
|rna_sample_type=total RNA
|rna_tube_id=122H4
|rna_weight_ug=10
|sample_age=
|sample_category=primary cells
|sample_cell_catalog=
|sample_cell_line=
|sample_cell_lot=
|sample_cell_type=epithelial cell of kidney
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_company=Sciencell/3H
|sample_description=
|sample_dev_stage=
|sample_disease=
|sample_donor(cell lot)=
|sample_ethnicity=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;6.06309676214094e-238!GO:0005737;cytoplasm;1.92949148590066e-197!GO:0043226;organelle;4.2478900665776e-190!GO:0043229;intracellular organelle;1.05083637260478e-189!GO:0043231;intracellular membrane-bound organelle;2.22845422606675e-180!GO:0043227;membrane-bound organelle;2.69397932399536e-180!GO:0044422;organelle part;1.73549757782431e-145!GO:0044446;intracellular organelle part;8.7136813405375e-144!GO:0044444;cytoplasmic part;3.22080458412088e-136!GO:0032991;macromolecular complex;2.31020465726657e-94!GO:0044238;primary metabolic process;7.33495929568523e-83!GO:0005515;protein binding;1.27489879414849e-82!GO:0030529;ribonucleoprotein complex;3.55510327019428e-81!GO:0044237;cellular metabolic process;1.56723516092548e-80!GO:0043170;macromolecule metabolic process;1.43789502280698e-75!GO:0044428;nuclear part;1.14454641788894e-66!GO:0043233;organelle lumen;2.51180706391799e-66!GO:0031974;membrane-enclosed lumen;2.51180706391799e-66!GO:0005634;nucleus;2.80627979796616e-65!GO:0003723;RNA binding;6.16058152330479e-65!GO:0005739;mitochondrion;1.23923759539216e-62!GO:0016043;cellular component organization and biogenesis;2.09424621290444e-55!GO:0019538;protein metabolic process;6.6140591236566e-53!GO:0031090;organelle membrane;9.3682133514527e-53!GO:0005840;ribosome;7.87136975770297e-50!GO:0006412;translation;3.88836073172609e-48!GO:0043234;protein complex;4.6119188197446e-48!GO:0033036;macromolecule localization;8.21122352535539e-48!GO:0015031;protein transport;1.03336692966522e-47!GO:0044260;cellular macromolecule metabolic process;7.65132292026246e-47!GO:0044267;cellular protein metabolic process;8.69221858203921e-47!GO:0008104;protein localization;1.9357463176384e-44!GO:0045184;establishment of protein localization;8.50175265780287e-44!GO:0006396;RNA processing;3.640086923883e-43!GO:0003735;structural constituent of ribosome;5.52018286278549e-43!GO:0044429;mitochondrial part;5.30341777702535e-42!GO:0009058;biosynthetic process;2.60500604448033e-41!GO:0043283;biopolymer metabolic process;4.02215053472294e-40!GO:0031967;organelle envelope;7.26960111842314e-40!GO:0031975;envelope;1.91939323748781e-39!GO:0046907;intracellular transport;3.27404739334869e-39!GO:0031981;nuclear lumen;1.16794709050012e-38!GO:0043228;non-membrane-bound organelle;1.21492564880096e-38!GO:0043232;intracellular non-membrane-bound organelle;1.21492564880096e-38!GO:0005829;cytosol;3.69559854536981e-38!GO:0009059;macromolecule biosynthetic process;6.63064642854376e-38!GO:0033279;ribosomal subunit;1.91149757610502e-37!GO:0044249;cellular biosynthetic process;4.4375498031084e-37!GO:0006996;organelle organization and biogenesis;1.14281074095242e-36!GO:0016071;mRNA metabolic process;2.12077220758861e-34!GO:0010467;gene expression;2.42146878741612e-33!GO:0008380;RNA splicing;2.45525058637094e-33!GO:0065003;macromolecular complex assembly;4.73270758216344e-33!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;4.84637878974143e-31!GO:0022607;cellular component assembly;1.81042658394859e-30!GO:0006886;intracellular protein transport;1.87227647011195e-30!GO:0006397;mRNA processing;7.42541486672762e-30!GO:0022613;ribonucleoprotein complex biogenesis and assembly;5.16318441803931e-29!GO:0005830;cytosolic ribosome (sensu Eukaryota);6.5636905632574e-28!GO:0005740;mitochondrial envelope;7.38834047755552e-27!GO:0051649;establishment of cellular localization;4.14407050995521e-26!GO:0051641;cellular localization;5.33185636886775e-26!GO:0019866;organelle inner membrane;6.31566905376004e-25!GO:0031966;mitochondrial membrane;7.85940340535489e-25!GO:0012505;endomembrane system;2.3448387743842e-24!GO:0005681;spliceosome;2.82010116660634e-24!GO:0007049;cell cycle;1.64178821557534e-23!GO:0044445;cytosolic part;2.15689415659029e-23!GO:0000166;nucleotide binding;4.15961381917981e-23!GO:0005743;mitochondrial inner membrane;5.26484170089816e-23!GO:0005654;nucleoplasm;9.65446961617769e-23!GO:0016462;pyrophosphatase activity;2.26462791410053e-22!GO:0006259;DNA metabolic process;2.634185749311e-22!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;2.91928910047197e-22!GO:0016817;hydrolase activity, acting on acid anhydrides;3.92645580547568e-22!GO:0017111;nucleoside-triphosphatase activity;1.83428327942287e-21!GO:0006457;protein folding;1.12496083092863e-20!GO:0015935;small ribosomal subunit;3.81579530098974e-20!GO:0006119;oxidative phosphorylation;4.1681341738093e-20!GO:0005783;endoplasmic reticulum;8.4103570986598e-20!GO:0005794;Golgi apparatus;6.82873312161629e-19!GO:0022618;protein-RNA complex assembly;1.71389948498164e-18!GO:0015934;large ribosomal subunit;3.10757819443894e-18!GO:0031980;mitochondrial lumen;3.60175857657332e-18!GO:0005759;mitochondrial matrix;3.60175857657332e-18!GO:0048770;pigment granule;7.62562622015958e-18!GO:0042470;melanosome;7.62562622015958e-18!GO:0044265;cellular macromolecule catabolic process;8.57003017216215e-18!GO:0044451;nucleoplasm part;1.32186937686003e-17!GO:0022402;cell cycle process;1.50953736986501e-17!GO:0032553;ribonucleotide binding;3.00043368755479e-17!GO:0032555;purine ribonucleotide binding;3.00043368755479e-17!GO:0016874;ligase activity;3.13568097264266e-17!GO:0000278;mitotic cell cycle;3.33184266742637e-17!GO:0005730;nucleolus;7.13364175290549e-17!GO:0043285;biopolymer catabolic process;1.27788399943166e-16!GO:0017076;purine nucleotide binding;1.48143305255171e-16!GO:0009057;macromolecule catabolic process;1.77012034403048e-16!GO:0051603;proteolysis involved in cellular protein catabolic process;1.81760181445136e-16!GO:0044455;mitochondrial membrane part;1.95263512225507e-16!GO:0019941;modification-dependent protein catabolic process;3.45865554680199e-16!GO:0043632;modification-dependent macromolecule catabolic process;3.45865554680199e-16!GO:0006511;ubiquitin-dependent protein catabolic process;3.50265029784324e-16!GO:0044432;endoplasmic reticulum part;3.73166988163463e-16!GO:0006512;ubiquitin cycle;3.97997857983498e-16!GO:0044257;cellular protein catabolic process;6.81311804225357e-16!GO:0000502;proteasome complex (sensu Eukaryota);9.15958310330709e-16!GO:0008134;transcription factor binding;1.90893109157792e-15!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);3.59744610949295e-15!GO:0030163;protein catabolic process;4.78962768825654e-15!GO:0044248;cellular catabolic process;4.81721389204856e-15!GO:0006605;protein targeting;4.88447514367988e-15!GO:0003676;nucleic acid binding;5.05950633065435e-15!GO:0043412;biopolymer modification;7.60447710971468e-15!GO:0008135;translation factor activity, nucleic acid binding;1.13829362809533e-14!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.76627684137658e-14!GO:0048193;Golgi vesicle transport;1.98460558120624e-14!GO:0012501;programmed cell death;2.91563477423346e-14!GO:0005746;mitochondrial respiratory chain;3.72660191087827e-14!GO:0051082;unfolded protein binding;4.38178708109508e-14!GO:0005635;nuclear envelope;4.75271133230635e-14!GO:0006974;response to DNA damage stimulus;6.09269481093089e-14!GO:0051186;cofactor metabolic process;6.09269481093089e-14!GO:0006915;apoptosis;6.12622256543745e-14!GO:0005761;mitochondrial ribosome;7.66650421265096e-14!GO:0000313;organellar ribosome;7.66650421265096e-14!GO:0016192;vesicle-mediated transport;8.63014478712552e-14!GO:0006464;protein modification process;8.98410222845474e-14!GO:0050136;NADH dehydrogenase (quinone) activity;3.4892378004706e-13!GO:0003954;NADH dehydrogenase activity;3.4892378004706e-13!GO:0008137;NADH dehydrogenase (ubiquinone) activity;3.4892378004706e-13!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);3.75911550899685e-13!GO:0000087;M phase of mitotic cell cycle;6.20688133998201e-13!GO:0016070;RNA metabolic process;8.18025661584342e-13!GO:0022403;cell cycle phase;9.93775181975631e-13!GO:0007067;mitosis;1.12907397298435e-12!GO:0005524;ATP binding;1.37986761612166e-12!GO:0008219;cell death;1.38075691401052e-12!GO:0016265;death;1.38075691401052e-12!GO:0031965;nuclear membrane;2.25779497095022e-12!GO:0000398;nuclear mRNA splicing, via spliceosome;2.37863929068887e-12!GO:0000375;RNA splicing, via transesterification reactions;2.37863929068887e-12!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;2.37863929068887e-12!GO:0032559;adenyl ribonucleotide binding;3.40197443409794e-12!GO:0005694;chromosome;4.42501770890581e-12!GO:0006413;translational initiation;6.7404096143029e-12!GO:0042175;nuclear envelope-endoplasmic reticulum network;8.19379855233829e-12!GO:0044453;nuclear membrane part;9.34816995077918e-12!GO:0051301;cell division;1.14295664170726e-11!GO:0005789;endoplasmic reticulum membrane;1.47094799650514e-11!GO:0003743;translation initiation factor activity;1.71418129247125e-11!GO:0042775;organelle ATP synthesis coupled electron transport;1.76669834611648e-11!GO:0042773;ATP synthesis coupled electron transport;1.76669834611648e-11!GO:0042254;ribosome biogenesis and assembly;1.80165215135125e-11!GO:0030554;adenyl nucleotide binding;1.88429024336095e-11!GO:0030964;NADH dehydrogenase complex (quinone);2.24473864604924e-11!GO:0045271;respiratory chain complex I;2.24473864604924e-11!GO:0005747;mitochondrial respiratory chain complex I;2.24473864604924e-11!GO:0044427;chromosomal part;3.26260727396166e-11!GO:0006732;coenzyme metabolic process;3.73147175203876e-11!GO:0043687;post-translational protein modification;4.51308456492965e-11!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;4.71113440436772e-11!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;6.02290933336582e-11!GO:0006281;DNA repair;7.03045529341233e-11!GO:0006446;regulation of translational initiation;1.06433960770787e-10!GO:0003924;GTPase activity;1.06491521043075e-10!GO:0006913;nucleocytoplasmic transport;1.65504438528387e-10!GO:0009055;electron carrier activity;1.65977028957579e-10!GO:0009259;ribonucleotide metabolic process;1.70471132272251e-10!GO:0043067;regulation of programmed cell death;2.31243173819358e-10!GO:0000279;M phase;2.80963083762705e-10!GO:0042623;ATPase activity, coupled;2.81133410693798e-10!GO:0042981;regulation of apoptosis;2.82413658738523e-10!GO:0051169;nuclear transport;4.60264697593745e-10!GO:0000074;regulation of progression through cell cycle;4.64872647316054e-10!GO:0015630;microtubule cytoskeleton;4.75259198353177e-10!GO:0016604;nuclear body;5.14507687324452e-10!GO:0051276;chromosome organization and biogenesis;5.14507687324452e-10!GO:0006163;purine nucleotide metabolic process;5.5235670149774e-10!GO:0051726;regulation of cell cycle;5.91853076263155e-10!GO:0009719;response to endogenous stimulus;5.93161919584018e-10!GO:0006461;protein complex assembly;6.44782796332787e-10!GO:0016887;ATPase activity;6.46804561799224e-10!GO:0005643;nuclear pore;8.10393161029136e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.12396862817345e-09!GO:0003712;transcription cofactor activity;1.32772342025969e-09!GO:0043069;negative regulation of programmed cell death;1.38943063132468e-09!GO:0048523;negative regulation of cellular process;1.42199261812366e-09!GO:0009056;catabolic process;1.43832954002935e-09!GO:0009150;purine ribonucleotide metabolic process;1.58299427785098e-09!GO:0008639;small protein conjugating enzyme activity;2.09233667343405e-09!GO:0006164;purine nucleotide biosynthetic process;2.67130069081148e-09!GO:0009260;ribonucleotide biosynthetic process;2.71586679077622e-09!GO:0004842;ubiquitin-protein ligase activity;3.42338545223226e-09!GO:0043066;negative regulation of apoptosis;4.42116420558332e-09!GO:0005768;endosome;4.48567475651613e-09!GO:0005793;ER-Golgi intermediate compartment;4.59183541383315e-09!GO:0019787;small conjugating protein ligase activity;6.29299421343079e-09!GO:0006260;DNA replication;7.30826417756906e-09!GO:0009152;purine ribonucleotide biosynthetic process;7.56005036759369e-09!GO:0008565;protein transporter activity;7.56194555508126e-09!GO:0050794;regulation of cellular process;7.68069792458513e-09!GO:0016879;ligase activity, forming carbon-nitrogen bonds;8.72201826799247e-09!GO:0044431;Golgi apparatus part;1.10733821371581e-08!GO:0005525;GTP binding;1.15188616464945e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.31081776553837e-08!GO:0009060;aerobic respiration;1.47952248890193e-08!GO:0006916;anti-apoptosis;1.52419341452574e-08!GO:0051246;regulation of protein metabolic process;1.93601592898238e-08!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;1.94511997163954e-08!GO:0007005;mitochondrion organization and biogenesis;2.06440645191305e-08!GO:0065004;protein-DNA complex assembly;2.09956662347251e-08!GO:0009141;nucleoside triphosphate metabolic process;2.23970930336989e-08!GO:0006325;establishment and/or maintenance of chromatin architecture;2.26527976320057e-08!GO:0009199;ribonucleoside triphosphate metabolic process;2.26810112447752e-08!GO:0065002;intracellular protein transport across a membrane;2.31851192170377e-08!GO:0004386;helicase activity;2.33256272901775e-08!GO:0006399;tRNA metabolic process;2.41356239858063e-08!GO:0048519;negative regulation of biological process;2.48767054402935e-08!GO:0016607;nuclear speck;2.81800728046862e-08!GO:0006403;RNA localization;3.04405603799976e-08!GO:0050657;nucleic acid transport;3.31787534974028e-08!GO:0051236;establishment of RNA localization;3.31787534974028e-08!GO:0050658;RNA transport;3.31787534974028e-08!GO:0007010;cytoskeleton organization and biogenesis;3.41503483611646e-08!GO:0017038;protein import;3.97718191016503e-08!GO:0009205;purine ribonucleoside triphosphate metabolic process;4.14873469545306e-08!GO:0009144;purine nucleoside triphosphate metabolic process;4.14873469545306e-08!GO:0045333;cellular respiration;4.3650577065896e-08!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;4.8651538886849e-08!GO:0015986;ATP synthesis coupled proton transport;5.73010199935012e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;5.73010199935012e-08!GO:0009142;nucleoside triphosphate biosynthetic process;6.04261861105295e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;6.04261861105295e-08!GO:0006323;DNA packaging;6.56516946244718e-08!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;6.65352343943508e-08!GO:0031988;membrane-bound vesicle;9.14282690252998e-08!GO:0016881;acid-amino acid ligase activity;9.25969517539753e-08!GO:0046930;pore complex;1.15255670460369e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.15255670460369e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.15255670460369e-07!GO:0000785;chromatin;1.35799526078916e-07!GO:0016023;cytoplasmic membrane-bound vesicle;1.42475312246847e-07!GO:0030532;small nuclear ribonucleoprotein complex;1.51876640887859e-07!GO:0006888;ER to Golgi vesicle-mediated transport;1.52964211578882e-07!GO:0030120;vesicle coat;1.69846859071188e-07!GO:0030662;coated vesicle membrane;1.69846859071188e-07!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.76904487484527e-07!GO:0004812;aminoacyl-tRNA ligase activity;1.76904487484527e-07!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.76904487484527e-07!GO:0008026;ATP-dependent helicase activity;1.78764662134919e-07!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;1.86468076647215e-07!GO:0048475;coated membrane;1.92069532626791e-07!GO:0030117;membrane coat;1.92069532626791e-07!GO:0032561;guanyl ribonucleotide binding;1.99339852918878e-07!GO:0019001;guanyl nucleotide binding;1.99339852918878e-07!GO:0051188;cofactor biosynthetic process;2.13232499515573e-07!GO:0007249;I-kappaB kinase/NF-kappaB cascade;2.27805902353894e-07!GO:0043038;amino acid activation;2.42377435454221e-07!GO:0006418;tRNA aminoacylation for protein translation;2.42377435454221e-07!GO:0043039;tRNA aminoacylation;2.42377435454221e-07!GO:0006099;tricarboxylic acid cycle;2.6291740516626e-07!GO:0046356;acetyl-CoA catabolic process;2.6291740516626e-07!GO:0006364;rRNA processing;2.81606188552009e-07!GO:0016740;transferase activity;2.99365557757654e-07!GO:0019829;cation-transporting ATPase activity;3.08519181429982e-07!GO:0006333;chromatin assembly or disassembly;3.75069097184309e-07!GO:0016072;rRNA metabolic process;4.57413624987311e-07!GO:0046034;ATP metabolic process;4.73224524095918e-07!GO:0009117;nucleotide metabolic process;5.04568052863631e-07!GO:0016787;hydrolase activity;5.38675752501633e-07!GO:0031982;vesicle;5.6273473142265e-07!GO:0000139;Golgi membrane;7.85579311238309e-07!GO:0030036;actin cytoskeleton organization and biogenesis;7.97941961312016e-07!GO:0031410;cytoplasmic vesicle;9.17561764866872e-07!GO:0005839;proteasome core complex (sensu Eukaryota);9.79488040595754e-07!GO:0006084;acetyl-CoA metabolic process;9.90242872486553e-07!GO:0031252;leading edge;1.01460646369771e-06!GO:0006754;ATP biosynthetic process;1.17678798156625e-06!GO:0006753;nucleoside phosphate metabolic process;1.17678798156625e-06!GO:0032446;protein modification by small protein conjugation;1.20097959668821e-06!GO:0044440;endosomal part;1.22821630339799e-06!GO:0010008;endosome membrane;1.22821630339799e-06!GO:0051028;mRNA transport;1.27107157875956e-06!GO:0006793;phosphorus metabolic process;1.57233905398553e-06!GO:0006796;phosphate metabolic process;1.57233905398553e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.69388944553671e-06!GO:0006366;transcription from RNA polymerase II promoter;2.02706024991613e-06!GO:0016567;protein ubiquitination;2.17753336670499e-06!GO:0043566;structure-specific DNA binding;2.34058776256614e-06!GO:0006334;nucleosome assembly;2.48388276323563e-06!GO:0005788;endoplasmic reticulum lumen;2.63123915901322e-06!GO:0005770;late endosome;2.8538907640389e-06!GO:0051170;nuclear import;4.02923312257313e-06!GO:0016469;proton-transporting two-sector ATPase complex;4.08320623362938e-06!GO:0000245;spliceosome assembly;4.3048610066489e-06!GO:0003697;single-stranded DNA binding;4.42936382815641e-06!GO:0051187;cofactor catabolic process;4.44955537339906e-06!GO:0016563;transcription activator activity;4.53627617522443e-06!GO:0009109;coenzyme catabolic process;4.66217646648671e-06!GO:0050789;regulation of biological process;5.37247314924601e-06!GO:0009108;coenzyme biosynthetic process;6.93622400932796e-06!GO:0006613;cotranslational protein targeting to membrane;7.46346919315009e-06!GO:0004298;threonine endopeptidase activity;7.74816358513442e-06!GO:0030029;actin filament-based process;7.87687414952702e-06!GO:0016853;isomerase activity;8.47724225092589e-06!GO:0045259;proton-transporting ATP synthase complex;9.24004828843299e-06!GO:0005798;Golgi-associated vesicle;9.96009913489518e-06!GO:0048471;perinuclear region of cytoplasm;1.01370846758903e-05!GO:0031497;chromatin assembly;1.03627589167894e-05!GO:0008654;phospholipid biosynthetic process;1.07395805198044e-05!GO:0006606;protein import into nucleus;1.07395805198044e-05!GO:0005773;vacuole;1.1821023844648e-05!GO:0008092;cytoskeletal protein binding;1.21996398365804e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;1.22626997464384e-05!GO:0015078;hydrogen ion transmembrane transporter activity;1.36256334962692e-05!GO:0045786;negative regulation of progression through cell cycle;1.85802563565939e-05!GO:0016310;phosphorylation;1.88677177488828e-05!GO:0003714;transcription corepressor activity;1.90645809438402e-05!GO:0016126;sterol biosynthetic process;2.08167415680134e-05!GO:0043623;cellular protein complex assembly;2.1071622394841e-05!GO:0005819;spindle;2.1471187611721e-05!GO:0007264;small GTPase mediated signal transduction;2.70720993686052e-05!GO:0006752;group transfer coenzyme metabolic process;2.85001882150882e-05!GO:0005874;microtubule;3.35347065582647e-05!GO:0042802;identical protein binding;3.89089036008208e-05!GO:0005667;transcription factor complex;3.89902066960646e-05!GO:0016491;oxidoreductase activity;3.97197836715543e-05!GO:0005813;centrosome;4.03856009904645e-05!GO:0003724;RNA helicase activity;4.57231162216639e-05!GO:0030867;rough endoplasmic reticulum membrane;5.30056169586648e-05!GO:0005762;mitochondrial large ribosomal subunit;5.49518363195414e-05!GO:0000315;organellar large ribosomal subunit;5.49518363195414e-05!GO:0005815;microtubule organizing center;5.52830596673136e-05!GO:0003713;transcription coactivator activity;5.55330402796302e-05!GO:0048522;positive regulation of cellular process;5.55330402796302e-05!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;5.8060415693692e-05!GO:0016859;cis-trans isomerase activity;5.92301955289081e-05!GO:0019899;enzyme binding;6.83544661438858e-05!GO:0051329;interphase of mitotic cell cycle;7.01869137414669e-05!GO:0006695;cholesterol biosynthetic process;7.86266549113311e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;8.10010136676959e-05!GO:0048468;cell development;8.35946484322547e-05!GO:0043021;ribonucleoprotein binding;8.92145317380241e-05!GO:0005905;coated pit;8.96764272755904e-05!GO:0000323;lytic vacuole;8.97552938952162e-05!GO:0005764;lysosome;8.97552938952162e-05!GO:0005769;early endosome;9.667126498623e-05!GO:0000151;ubiquitin ligase complex;0.000100936769841489!GO:0045454;cell redox homeostasis;0.000132933275925589!GO:0007243;protein kinase cascade;0.000154332905676096!GO:0051427;hormone receptor binding;0.000160133703523029!GO:0016568;chromatin modification;0.00017365337552585!GO:0051325;interphase;0.000176236293684323!GO:0016779;nucleotidyltransferase activity;0.00019258580423348!GO:0006612;protein targeting to membrane;0.0002018681089602!GO:0008610;lipid biosynthetic process;0.000216563020031547!GO:0001726;ruffle;0.000248649578320885!GO:0015980;energy derivation by oxidation of organic compounds;0.000249702977925023!GO:0000314;organellar small ribosomal subunit;0.000250732686048821!GO:0005763;mitochondrial small ribosomal subunit;0.000250732686048821!GO:0019843;rRNA binding;0.00025237576658242!GO:0005048;signal sequence binding;0.000295966903951019!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000295966903951019!GO:0001558;regulation of cell growth;0.000297343176446431!GO:0016564;transcription repressor activity;0.000298880647452967!GO:0007051;spindle organization and biogenesis;0.000301046875200755!GO:0035257;nuclear hormone receptor binding;0.000311677137322137!GO:0008250;oligosaccharyl transferase complex;0.000339167215554587!GO:0030133;transport vesicle;0.000356037199314338!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000364852878940594!GO:0005885;Arp2/3 protein complex;0.000371070039930066!GO:0009892;negative regulation of metabolic process;0.000374740975516336!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000441123879721952!GO:0006261;DNA-dependent DNA replication;0.000454605114518211!GO:0031324;negative regulation of cellular metabolic process;0.000454838593072009!GO:0033116;ER-Golgi intermediate compartment membrane;0.00048943132039607!GO:0065009;regulation of a molecular function;0.000496449491802067!GO:0030118;clathrin coat;0.000591469003555063!GO:0016363;nuclear matrix;0.000598338326025466!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000610366265934142!GO:0051168;nuclear export;0.000618846154547422!GO:0008186;RNA-dependent ATPase activity;0.000621747677839696!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000626814706538832!GO:0046467;membrane lipid biosynthetic process;0.000657463741254874!GO:0008632;apoptotic program;0.000669315934499068!GO:0031968;organelle outer membrane;0.000690155776374634!GO:0008361;regulation of cell size;0.000701871733884198!GO:0016044;membrane organization and biogenesis;0.000724703457322794!GO:0004576;oligosaccharyl transferase activity;0.000746650945237817!GO:0009165;nucleotide biosynthetic process;0.000800324445907427!GO:0051920;peroxiredoxin activity;0.000817061858056218!GO:0007088;regulation of mitosis;0.000817061858056218!GO:0009967;positive regulation of signal transduction;0.000864762442445134!GO:0016049;cell growth;0.000864762442445134!GO:0003899;DNA-directed RNA polymerase activity;0.000879248449776014!GO:0005791;rough endoplasmic reticulum;0.000899883766682272!GO:0000075;cell cycle checkpoint;0.000952223759984169!GO:0006839;mitochondrial transport;0.000998801994538926!GO:0019867;outer membrane;0.00103925426123426!GO:0006414;translational elongation;0.00103961104710874!GO:0007017;microtubule-based process;0.00106327946124542!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00109859620159813!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.00110080951825358!GO:0008637;apoptotic mitochondrial changes;0.00114002019575622!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00114002019575622!GO:0030658;transport vesicle membrane;0.00114797916292363!GO:0046474;glycerophospholipid biosynthetic process;0.00118717531854702!GO:0018196;peptidyl-asparagine modification;0.00144059519454955!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00144059519454955!GO:0005741;mitochondrial outer membrane;0.00146726616488385!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00149462514673131!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00149462514673131!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00149462514673131!GO:0043681;protein import into mitochondrion;0.00164996797845056!GO:0003690;double-stranded DNA binding;0.00170892899906428!GO:0004004;ATP-dependent RNA helicase activity;0.00170892899906428!GO:0006383;transcription from RNA polymerase III promoter;0.00171635508516883!GO:0003729;mRNA binding;0.00177040696853057!GO:0005852;eukaryotic translation initiation factor 3 complex;0.0018787147284776!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0019093586692!GO:0043065;positive regulation of apoptosis;0.00194364573974357!GO:0031072;heat shock protein binding;0.00202183288721521!GO:0044262;cellular carbohydrate metabolic process;0.00204930866750893!GO:0000775;chromosome, pericentric region;0.00217958105660528!GO:0008139;nuclear localization sequence binding;0.00233270552805848!GO:0048500;signal recognition particle;0.00235747234111242!GO:0048487;beta-tubulin binding;0.00242807259152457!GO:0030660;Golgi-associated vesicle membrane;0.00248883459233054!GO:0015631;tubulin binding;0.00259127559739405!GO:0051789;response to protein stimulus;0.00263961505002721!GO:0006986;response to unfolded protein;0.00263961505002721!GO:0043068;positive regulation of programmed cell death;0.0026477115104358!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00268462415145816!GO:0015399;primary active transmembrane transporter activity;0.00268462415145816!GO:0000786;nucleosome;0.00269182875648845!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.00271702283980318!GO:0030119;AP-type membrane coat adaptor complex;0.00272055725555437!GO:0004674;protein serine/threonine kinase activity;0.00272161585523752!GO:0030027;lamellipodium;0.00286549747540438!GO:0006891;intra-Golgi vesicle-mediated transport;0.00287029647029621!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00303497303334555!GO:0016197;endosome transport;0.00304950489703674!GO:0007006;mitochondrial membrane organization and biogenesis;0.00335803657480244!GO:0040008;regulation of growth;0.00343313649032074!GO:0045045;secretory pathway;0.00345349899017758!GO:0051128;regulation of cellular component organization and biogenesis;0.00350320396939054!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.00350320396939054!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00352701411317068!GO:0046489;phosphoinositide biosynthetic process;0.00364871236995278!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.00367227242789828!GO:0000059;protein import into nucleus, docking;0.00371607946117075!GO:0001836;release of cytochrome c from mitochondria;0.00373108890631758!GO:0030131;clathrin adaptor complex;0.00373108890631758!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00387961466111233!GO:0031902;late endosome membrane;0.00392330614200285!GO:0005657;replication fork;0.00410256200927422!GO:0006626;protein targeting to mitochondrion;0.0041286168403895!GO:0006401;RNA catabolic process;0.00416268383493506!GO:0051252;regulation of RNA metabolic process;0.00421121694812023!GO:0035258;steroid hormone receptor binding;0.00421641430266305!GO:0007093;mitotic cell cycle checkpoint;0.00430310977638044!GO:0030659;cytoplasmic vesicle membrane;0.00430310977638044!GO:0051087;chaperone binding;0.00435876604334877!GO:0030663;COPI coated vesicle membrane;0.00475170746748433!GO:0030126;COPI vesicle coat;0.00475170746748433!GO:0006302;double-strand break repair;0.00485829255945933!GO:0006650;glycerophospholipid metabolic process;0.005010902531468!GO:0030134;ER to Golgi transport vesicle;0.00502055336530332!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00521201192604705!GO:0045047;protein targeting to ER;0.00521201192604705!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00523803852131604!GO:0006352;transcription initiation;0.00532850524526325!GO:0008312;7S RNA binding;0.00551765340805432!GO:0005856;cytoskeleton;0.00551765340805432!GO:0003684;damaged DNA binding;0.00557118094468049!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00566229542239359!GO:0065007;biological regulation;0.0056774906046178!GO:0000776;kinetochore;0.0058178600079249!GO:0030880;RNA polymerase complex;0.0058388590093798!GO:0006402;mRNA catabolic process;0.00584676125165079!GO:0051287;NAD binding;0.00584676125165079!GO:0030521;androgen receptor signaling pathway;0.00592296988613776!GO:0019222;regulation of metabolic process;0.00594233935560871!GO:0005684;U2-dependent spliceosome;0.00630294210782699!GO:0005637;nuclear inner membrane;0.00658372814758139!GO:0048518;positive regulation of biological process;0.00666108007705386!GO:0051052;regulation of DNA metabolic process;0.00666108007705386!GO:0030127;COPII vesicle coat;0.00666108007705386!GO:0012507;ER to Golgi transport vesicle membrane;0.00666108007705386!GO:0012506;vesicle membrane;0.00670927038324565!GO:0044452;nucleolar part;0.00693358354304653!GO:0000082;G1/S transition of mitotic cell cycle;0.00702885911430528!GO:0045893;positive regulation of transcription, DNA-dependent;0.00708803636316735!GO:0006007;glucose catabolic process;0.00710943924555272!GO:0008629;induction of apoptosis by intracellular signals;0.00735656945308446!GO:0008094;DNA-dependent ATPase activity;0.00738686736909924!GO:0044433;cytoplasmic vesicle part;0.00752554914656146!GO:0003779;actin binding;0.00753188676838036!GO:0008047;enzyme activator activity;0.00776511141390823!GO:0004177;aminopeptidase activity;0.00804818641935321!GO:0005869;dynactin complex;0.00808087992133509!GO:0051101;regulation of DNA binding;0.00826497613653958!GO:0005938;cell cortex;0.00826497613653958!GO:0006950;response to stress;0.00837195846782419!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.00852192897813088!GO:0006509;membrane protein ectodomain proteolysis;0.00853290331797715!GO:0033619;membrane protein proteolysis;0.00853290331797715!GO:0030031;cell projection biogenesis;0.0086024547340809!GO:0003746;translation elongation factor activity;0.0088097390395875!GO:0001666;response to hypoxia;0.009101259761204!GO:0015992;proton transport;0.00915424029859307!GO:0006892;post-Golgi vesicle-mediated transport;0.00933784600443247!GO:0051540;metal cluster binding;0.00959563344237208!GO:0051536;iron-sulfur cluster binding;0.00959563344237208!GO:0017166;vinculin binding;0.00994596747281212!GO:0007052;mitotic spindle organization and biogenesis;0.0101892252562793!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0102030243458461!GO:0030137;COPI-coated vesicle;0.0103868601265077!GO:0043492;ATPase activity, coupled to movement of substances;0.0104284811553266!GO:0030132;clathrin coat of coated pit;0.0104829297282713!GO:0031543;peptidyl-proline dioxygenase activity;0.0106778826594789!GO:0006144;purine base metabolic process;0.0108740168148552!GO:0030125;clathrin vesicle coat;0.010990432457635!GO:0030665;clathrin coated vesicle membrane;0.010990432457635!GO:0033673;negative regulation of kinase activity;0.0110667254618439!GO:0006469;negative regulation of protein kinase activity;0.0110667254618439!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.011259662676087!GO:0006595;polyamine metabolic process;0.0113277717800668!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0116001717277436!GO:0000428;DNA-directed RNA polymerase complex;0.0116001717277436!GO:0006417;regulation of translation;0.0117437480992262!GO:0005832;chaperonin-containing T-complex;0.0117437480992262!GO:0006818;hydrogen transport;0.0117437480992262!GO:0006091;generation of precursor metabolites and energy;0.011760558935235!GO:0043022;ribosome binding;0.011760558935235!GO:0016481;negative regulation of transcription;0.011853483075721!GO:0031124;mRNA 3'-end processing;0.0119068688789322!GO:0000339;RNA cap binding;0.0125216391936474!GO:0009116;nucleoside metabolic process;0.0127101850436529!GO:0016272;prefoldin complex;0.0127719524970925!GO:0030176;integral to endoplasmic reticulum membrane;0.0129038815977665!GO:0043284;biopolymer biosynthetic process;0.012995086418889!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0130710952669305!GO:0006740;NADPH regeneration;0.0132296628958612!GO:0006098;pentose-phosphate shunt;0.0132296628958612!GO:0016408;C-acyltransferase activity;0.0132451120425233!GO:0000209;protein polyubiquitination;0.0132658600309398!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0132848375317545!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0133939822424777!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0133939822424777!GO:0009112;nucleobase metabolic process;0.0136988272053364!GO:0008022;protein C-terminus binding;0.0140070734419774!GO:0003711;transcription elongation regulator activity;0.0140278821780677!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0141760111923401!GO:0033043;regulation of organelle organization and biogenesis;0.0141760111923401!GO:0043488;regulation of mRNA stability;0.0142709782548157!GO:0043487;regulation of RNA stability;0.0142709782548157!GO:0008154;actin polymerization and/or depolymerization;0.0144998938678892!GO:0045941;positive regulation of transcription;0.0152001534146913!GO:0008180;signalosome;0.0152001534146913!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0152073006834106!GO:0008033;tRNA processing;0.0152147718186888!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0152396450861609!GO:0045792;negative regulation of cell size;0.0153234659021581!GO:0007021;tubulin folding;0.0154473548985643!GO:0031901;early endosome membrane;0.0155221453540657!GO:0008283;cell proliferation;0.0158633390337893!GO:0032508;DNA duplex unwinding;0.0160045886713996!GO:0032392;DNA geometric change;0.0160045886713996!GO:0030032;lamellipodium biogenesis;0.0162359800165768!GO:0006611;protein export from nucleus;0.0162359800165768!GO:0007050;cell cycle arrest;0.0164869852637506!GO:0051348;negative regulation of transferase activity;0.0166200674066536!GO:0016584;nucleosome positioning;0.0171045054794361!GO:0030308;negative regulation of cell growth;0.0174426183524877!GO:0050681;androgen receptor binding;0.0174757035755097!GO:0005862;muscle thin filament tropomyosin;0.0174941241954154!GO:0050811;GABA receptor binding;0.0180876997467495!GO:0003678;DNA helicase activity;0.0181520073709911!GO:0051059;NF-kappaB binding;0.0183724069380419!GO:0004680;casein kinase activity;0.0187009336321401!GO:0032940;secretion by cell;0.01888616948313!GO:0008234;cysteine-type peptidase activity;0.0189451979986129!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0190908913386506!GO:0016251;general RNA polymerase II transcription factor activity;0.0191441527895471!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0191499329877005!GO:0050662;coenzyme binding;0.0191992621503778!GO:0031625;ubiquitin protein ligase binding;0.0192102802269868!GO:0019798;procollagen-proline dioxygenase activity;0.0203480309617693!GO:0022408;negative regulation of cell-cell adhesion;0.020489663685129!GO:0007242;intracellular signaling cascade;0.020489663685129!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0205339932336737!GO:0006376;mRNA splice site selection;0.0205339932336737!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0205339932336737!GO:0007265;Ras protein signal transduction;0.0206312815891848!GO:0051098;regulation of binding;0.0208643673489252!GO:0046365;monosaccharide catabolic process;0.0211640565117549!GO:0050790;regulation of catalytic activity;0.0211720684403652!GO:0043281;regulation of caspase activity;0.0212230031719928!GO:0001952;regulation of cell-matrix adhesion;0.0212496002816499!GO:0006643;membrane lipid metabolic process;0.0212496002816499!GO:0043154;negative regulation of caspase activity;0.0213569498378003!GO:0006672;ceramide metabolic process;0.0213859018720291!GO:0006289;nucleotide-excision repair;0.0214330880244871!GO:0006497;protein amino acid lipidation;0.0220164139739909!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0221919833293907!GO:0006220;pyrimidine nucleotide metabolic process;0.022231783822419!GO:0032906;transforming growth factor-beta2 production;0.0224867659822617!GO:0032909;regulation of transforming growth factor-beta2 production;0.0224867659822617!GO:0046519;sphingoid metabolic process;0.0227038235972421!GO:0005774;vacuolar membrane;0.0229069725996277!GO:0031418;L-ascorbic acid binding;0.0229981205472623!GO:0051270;regulation of cell motility;0.0230767929463084!GO:0000049;tRNA binding;0.0235415350998579!GO:0030384;phosphoinositide metabolic process;0.0236789731487769!GO:0019752;carboxylic acid metabolic process;0.0237154936746658!GO:0046483;heterocycle metabolic process;0.0239559453322438!GO:0006082;organic acid metabolic process;0.0243501989676615!GO:0031529;ruffle organization and biogenesis;0.024535182533606!GO:0022407;regulation of cell-cell adhesion;0.0245441248714251!GO:0006268;DNA unwinding during replication;0.0246506285901485!GO:0007162;negative regulation of cell adhesion;0.0253976488145369!GO:0000792;heterochromatin;0.0257105338918852!GO:0022406;membrane docking;0.0260777086279219!GO:0048278;vesicle docking;0.0260777086279219!GO:0008064;regulation of actin polymerization and/or depolymerization;0.0262184588601278!GO:0005876;spindle microtubule;0.0262312377182494!GO:0005669;transcription factor TFIID complex;0.0263205575522233!GO:0051090;regulation of transcription factor activity;0.0264677879018034!GO:0006405;RNA export from nucleus;0.0264681090080656!GO:0006378;mRNA polyadenylation;0.0265106363952!GO:0008097;5S rRNA binding;0.0266287322750042!GO:0032984;macromolecular complex disassembly;0.026630493934459!GO:0016311;dephosphorylation;0.0271000447200421!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0274062778969623!GO:0043624;cellular protein complex disassembly;0.0275530281949033!GO:0030145;manganese ion binding;0.0281143614323126!GO:0004748;ribonucleoside-diphosphate reductase activity;0.0281143614323126!GO:0016728;oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor;0.0281143614323126!GO:0007034;vacuolar transport;0.0287339079143775!GO:0008538;proteasome activator activity;0.0287459763183775!GO:0003682;chromatin binding;0.0291754094657276!GO:0006979;response to oxidative stress;0.0291915341896471!GO:0043130;ubiquitin binding;0.0291915341896471!GO:0032182;small conjugating protein binding;0.0291915341896471!GO:0032594;protein transport within lipid bilayer;0.0291915341896471!GO:0032907;transforming growth factor-beta3 production;0.0291915341896471!GO:0032596;protein transport into lipid raft;0.0291915341896471!GO:0032910;regulation of transforming growth factor-beta3 production;0.0291915341896471!GO:0032595;B cell receptor transport within lipid bilayer;0.0291915341896471!GO:0033606;chemokine receptor transport within lipid bilayer;0.0291915341896471!GO:0032600;chemokine receptor transport out of lipid raft;0.0291915341896471!GO:0032599;protein transport out of lipid raft;0.0291915341896471!GO:0032597;B cell receptor transport into lipid raft;0.0291915341896471!GO:0032913;negative regulation of transforming growth factor-beta3 production;0.0291915341896471!GO:0043433;negative regulation of transcription factor activity;0.0294213498752273!GO:0030041;actin filament polymerization;0.0295049905929379!GO:0030833;regulation of actin filament polymerization;0.0298409700517611!GO:0051092;activation of NF-kappaB transcription factor;0.0310371063112206!GO:0046822;regulation of nucleocytoplasmic transport;0.0310371063112206!GO:0016791;phosphoric monoester hydrolase activity;0.0315650338498091!GO:0031326;regulation of cellular biosynthetic process;0.031666251085817!GO:0007040;lysosome organization and biogenesis;0.0319145140985934!GO:0051539;4 iron, 4 sulfur cluster binding;0.032075203957326!GO:0019320;hexose catabolic process;0.0321410600794148!GO:0003756;protein disulfide isomerase activity;0.0321410600794148!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0321410600794148!GO:0046164;alcohol catabolic process;0.032648826439431!GO:0006917;induction of apoptosis;0.0327183079378052!GO:0006778;porphyrin metabolic process;0.0338550087993301!GO:0033013;tetrapyrrole metabolic process;0.0338550087993301!GO:0005853;eukaryotic translation elongation factor 1 complex;0.0339918654519485!GO:0005784;translocon complex;0.0340216498985241!GO:0000086;G2/M transition of mitotic cell cycle;0.0340216498985241!GO:0031123;RNA 3'-end processing;0.0348056024297191!GO:0042770;DNA damage response, signal transduction;0.0349885187344838!GO:0009303;rRNA transcription;0.0349885187344838!GO:0003923;GPI-anchor transamidase activity;0.0349885187344838!GO:0016255;attachment of GPI anchor to protein;0.0349885187344838!GO:0042765;GPI-anchor transamidase complex;0.0349885187344838!GO:0006275;regulation of DNA replication;0.0349885187344838!GO:0006096;glycolysis;0.0356727578220312!GO:0042393;histone binding;0.0358934710841874!GO:0006904;vesicle docking during exocytosis;0.0362394203371563!GO:0005996;monosaccharide metabolic process;0.0364570264609456!GO:0048146;positive regulation of fibroblast proliferation;0.0366941182375781!GO:0008243;plasminogen activator activity;0.0369059138106664!GO:0006338;chromatin remodeling;0.0369059138106664!GO:0030100;regulation of endocytosis;0.0370138706058409!GO:0016301;kinase activity;0.0371306294754145!GO:0033559;unsaturated fatty acid metabolic process;0.0371306294754145!GO:0006636;unsaturated fatty acid biosynthetic process;0.0371306294754145!GO:0009889;regulation of biosynthetic process;0.0371408802761912!GO:0019318;hexose metabolic process;0.0372240560699461!GO:0006506;GPI anchor biosynthetic process;0.0372845125817555!GO:0022411;cellular component disassembly;0.0377791226116778!GO:0006897;endocytosis;0.0378201987937543!GO:0010324;membrane invagination;0.0378201987937543!GO:0006739;NADP metabolic process;0.0381174817009912!GO:0030496;midbody;0.0381174817009912!GO:0048144;fibroblast proliferation;0.0381174817009912!GO:0048145;regulation of fibroblast proliferation;0.0381174817009912!GO:0006100;tricarboxylic acid cycle intermediate metabolic process;0.0382138801654414!GO:0030140;trans-Golgi network transport vesicle;0.0383095952906278!GO:0016407;acetyltransferase activity;0.0391991989759553!GO:0016776;phosphotransferase activity, phosphate group as acceptor;0.0393002801584339!GO:0031371;ubiquitin conjugating enzyme complex;0.040266168184187!GO:0012502;induction of programmed cell death;0.0421995773586678!GO:0008601;protein phosphatase type 2A regulator activity;0.0423277453737864!GO:0000096;sulfur amino acid metabolic process;0.0424224935591008!GO:0006310;DNA recombination;0.042790529462561!GO:0045936;negative regulation of phosphate metabolic process;0.0434795692223995!GO:0042158;lipoprotein biosynthetic process;0.043800630102254!GO:0043241;protein complex disassembly;0.0445110601919383!GO:0031970;organelle envelope lumen;0.045026666396621!GO:0007059;chromosome segregation;0.0463290508519563!GO:0009124;nucleoside monophosphate biosynthetic process;0.0464641330567871!GO:0009123;nucleoside monophosphate metabolic process;0.0464641330567871!GO:0006769;nicotinamide metabolic process;0.0470861210298338!GO:0006984;ER-nuclear signaling pathway;0.0470861210298338!GO:0008426;protein kinase C inhibitor activity;0.0470883004112373!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0470912463646078!GO:0015002;heme-copper terminal oxidase activity;0.0470912463646078!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0470912463646078!GO:0004129;cytochrome-c oxidase activity;0.0470912463646078!GO:0006284;base-excision repair;0.0478089589321836!GO:0006607;NLS-bearing substrate import into nucleus;0.0483576473633694!GO:0043071;positive regulation of non-apoptotic programmed cell death;0.04867896394798!GO:0017134;fibroblast growth factor binding;0.0494728832289115!GO:0001953;negative regulation of cell-matrix adhesion;0.0495359646656996
|sample_id=11678
|sample_note=
|sample_sex=
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=kidney
|top_motifs=XCPE1{core}:1.44554840762;HNF1A:1.39623936257;ZEB1:1.32839257716;TEF:1.25743588657;NKX2-3_NKX2-5:1.22297988728;TBX4,5:1.20776570255;ADNP_IRX_SIX_ZHX:1.19450079314;ALX1:1.16806090865;PAX8:1.15118660062;MYOD1:1.12318992524;SNAI1..3:1.11126780489;SOX2:1.09385871914;GZF1:1.05437152699;SP1:0.956969002015;FOXQ1:0.92591056561;POU1F1:0.787284634777;JUN:0.757006447876;VSX1,2:0.732388936207;ZNF148:0.709487743425;ONECUT1,2:0.657361998158;NKX3-1:0.627695482054;RXRA_VDR{dimer}:0.613742836085;LMO2:0.598763491501;GFI1:0.598170613763;NR3C1:0.588844321988;TFCP2:0.55580917633;PBX1:0.528717045173;NR1H4:0.528419727812;TEAD1:0.513620584825;EBF1:0.502750080649;EVI1:0.491883631803;FOSL2:0.472869143172;NKX6-1,2:0.461728472967;ESRRA:0.450555378086;STAT5{A,B}:0.449904443598;HOX{A5,B5}:0.446356136117;POU2F1..3:0.441249262679;ZIC1..3:0.439386484564;EN1,2:0.435258352509;AIRE:0.433415268546;PDX1:0.423305301183;KLF4:0.421622286565;PAX5:0.408726168196;ATF2:0.40326041702;LHX3,4:0.373788736423;TFDP1:0.367669009602;E2F1..5:0.336923221458;NFY{A,B,C}:0.323586208664;ARID5B:0.312889987987;ZFP161:0.305669335681;TP53:0.30375415969;MTF1:0.291297502545;MAZ:0.288893889831;SOX17:0.288351436612;SRF:0.280981763264;HSF1,2:0.269923375599;TFAP2{A,C}:0.258102933243;GFI1B:0.239786696497;STAT1,3:0.212702429576;NFE2L2:0.210829713907;ALX4:0.188587663861;TBP:0.155784478345;UFEwm:0.151089835876;LEF1_TCF7_TCF7L1,2:0.150260205298;IKZF1:0.149389974638;MTE{core}:0.140132343247;GTF2I:0.13418208254;FOS_FOS{B,L1}_JUN{B,D}:0.123684617307;NKX2-1,4:0.122417446796;PPARG:0.117363524417;CDX1,2,4:0.109784762805;NFATC1..3:0.107029502729;TFAP2B:0.0996074023589;BACH2:0.0978714129088;HIC1:0.0958674143422;NFKB1_REL_RELA:0.0956508056933;RXR{A,B,G}:0.087537105184;GTF2A1,2:0.0781576725612;MYBL2:0.056451775007;SMAD1..7,9:0.0491849957067;ZBTB16:0.0442790744721;ZNF143:0.0381050140646;GCM1,2:0.0354695141055;ZBTB6:0.0250826971281;SPZ1:0.0232395329606;RFX1:0.0168830153868;RREB1:0.0069970022293;TFAP4:0.00649080944122;NRF1:-0.00111636812488;EP300:-0.00709239265906;HAND1,2:-0.0154946347818;NFE2L1:-0.0167968891475;HNF4A_NR2F1,2:-0.0235480840986;FOX{F1,F2,J1}:-0.0353616502708;MED-1{core}:-0.0441989638355;NKX3-2:-0.0562860699141;ZNF384:-0.0637193256638;HBP1_HMGB_SSRP1_UBTF:-0.065010949361;TLX1..3_NFIC{dimer}:-0.0658612814952;FOXN1:-0.066550167306;GLI1..3:-0.070517423349;HOX{A4,D4}:-0.0839009392567;NFE2:-0.0849281403618;NR6A1:-0.0860941130151;POU3F1..4:-0.0898161480153;ZNF423:-0.0929954397893;PRDM1:-0.102538154612;PRRX1,2:-0.107625447247;CUX2:-0.118042127807;MZF1:-0.119058681724;FOXD3:-0.119542124003;CRX:-0.120557142755;OCT4_SOX2{dimer}:-0.133414828816;IRF7:-0.149086249272;TAL1_TCF{3,4,12}:-0.149387551752;AHR_ARNT_ARNT2:-0.156209439454;T:-0.172728030888;PATZ1:-0.188164297655;ATF4:-0.191292711204;CDC5L:-0.201422405983;MEF2{A,B,C,D}:-0.211593299345;NHLH1,2:-0.213605691818;MYB:-0.217240779646;DBP:-0.218527129521;SOX{8,9,10}:-0.232012501729;ELK1,4_GABP{A,B1}:-0.232143613969;FOXO1,3,4:-0.240567212588;PAX4:-0.244988869457;PITX1..3:-0.258021273669;EGR1..3:-0.258331241917;PAX1,9:-0.267992643338;RFX2..5_RFXANK_RFXAP:-0.272926795541;HMGA1,2:-0.281110113876;STAT2,4,6:-0.293078809862;ETS1,2:-0.311482693036;XBP1:-0.319300778106;bHLH_family:-0.322529871525;HLF:-0.324779681435;GATA6:-0.32545399195;RUNX1..3:-0.325505153069;REST:-0.328625054763;NFIX:-0.34515498989;FOXP3:-0.34552750082;FOX{I1,J2}:-0.352970059251;TOPORS:-0.356441588484;ATF6:-0.370013938479;BPTF:-0.374134682406;CEBPA,B_DDIT3:-0.374965052056;FOXA2:-0.375706109122;MYFfamily:-0.389985234938;AR:-0.392077723665;SPI1:-0.409667720594;SREBF1,2:-0.411837040149;NANOG:-0.41349288953;FOXP1:-0.417837874215;POU5F1:-0.426120431772;PAX2:-0.43228909116;ELF1,2,4:-0.434695310208;IRF1,2:-0.438453203378;RBPJ:-0.458780450515;FOXL1:-0.486871164302;HIF1A:-0.488930602885;SPIB:-0.502087148576;HOX{A6,A7,B6,B7}:-0.531064306304;PAX6:-0.561930519534;IKZF2:-0.563369293579;ESR1:-0.572049301582;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.579955745267;CREB1:-0.600914032183;YY1:-0.602967840885;GATA4:-0.615536693338;HOXA9_MEIS1:-0.620228814878;FOXM1:-0.634559432775;NANOG{mouse}:-0.671857233484;BREu{core}:-0.676670199784;RORA:-0.686420565449;FOX{D1,D2}:-0.691330819398;SOX5:-0.70211847029;POU6F1:-0.70376277628;TLX2:-0.714001776576;TGIF1:-0.746999674592;ATF5_CREB3:-0.758589984656;HMX1:-0.78251144009;NR5A1,2:-0.804711699819;NKX2-2,8:-0.808263679005;NFIL3:-0.811904311134;DMAP1_NCOR{1,2}_SMARC:-0.818897573855;MAFB:-0.887023979517;PAX3,7:-0.90064460568;HES1:-0.920922651626;ZNF238:-1.01383999403;RXR{A,B,G}_{NR1H2,PPAR}dimers:-1.19966327545
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11678-122H4;search_select_hide=table117:FF:11678-122H4
}}
}}

Latest revision as of 18:14, 4 June 2020

Name:Renal Epithelial Cells, donor3
Species:Human (Homo sapiens)
Library ID:CNhs12732
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissuekidney
dev stageNA
sexNA
ageNA
cell typeepithelial cell of kidney
cell lineNA
companySciencell/3H
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot number2265
catalog numberSC4125
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-TRIzol-ethanol-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005666
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs12732 CAGE DRX008429 DRR009301
Accession ID Hg19

Library idBAMCTSS
CNhs12732 DRZ000726 DRZ002111
Accession ID Hg38

Library idBAMCTSS
CNhs12732 DRZ012076 DRZ013461
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.146
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.251
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural-0.00392
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19-0.11
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.163
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.186
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.173
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0.213
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.0661
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8-0.03
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0.184
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.179
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0.119
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0.233
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0.197
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0.153
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12732

Jaspar motifP-value
MA0002.20.0541
MA0003.10.97
MA0004.10.0255
MA0006.10.0293
MA0007.10.545
MA0009.10.0625
MA0014.10.205
MA0017.10.917
MA0018.20.962
MA0019.10.102
MA0024.10.0274
MA0025.10.964
MA0027.10.646
MA0028.10.51
MA0029.10.951
MA0030.10.814
MA0031.10.278
MA0035.20.411
MA0038.10.00581
MA0039.20.0187
MA0040.10.548
MA0041.10.573
MA0042.10.591
MA0043.10.738
MA0046.14.78681e-27
MA0047.20.383
MA0048.10.35
MA0050.10.00591
MA0051.10.503
MA0052.10.373
MA0055.10.438
MA0057.10.611
MA0058.10.00215
MA0059.10.0728
MA0060.10.00102
MA0061.10.802
MA0062.24.68479e-4
MA0065.20.395
MA0066.10.921
MA0067.10.0223
MA0068.10.199
MA0069.10.245
MA0070.10.0482
MA0071.10.525
MA0072.10.557
MA0073.10.905
MA0074.10.937
MA0076.10.0237
MA0077.10.0152
MA0078.10.887
MA0079.20.822
MA0080.25.14599e-7
MA0081.10.00561
MA0083.10.215
MA0084.10.0845
MA0087.10.927
MA0088.10.484
MA0090.10.00355
MA0091.10.00104
MA0092.10.211
MA0093.10.0317
MA0099.20.00142
MA0100.10.647
MA0101.10.394
MA0102.20.138
MA0103.11.38242e-5
MA0104.20.0162
MA0105.10.0891
MA0106.10.0602
MA0107.10.364
MA0108.20.0315
MA0111.10.507
MA0112.20.0838
MA0113.10.118
MA0114.10.659
MA0115.10.716
MA0116.10.00901
MA0117.10.298
MA0119.10.0686
MA0122.10.362
MA0124.10.272
MA0125.10.207
MA0131.10.34
MA0135.10.253
MA0136.11.05081e-4
MA0137.20.93
MA0138.20.0821
MA0139.10.836
MA0140.10.073
MA0141.10.0212
MA0142.10.216
MA0143.10.785
MA0144.10.788
MA0145.10.0791
MA0146.10.432
MA0147.10.0246
MA0148.10.136
MA0149.10.302
MA0150.10.0968
MA0152.10.251
MA0153.18.36236e-23
MA0154.10.266
MA0155.10.827
MA0156.10.0018
MA0157.10.308
MA0159.10.69
MA0160.10.0484
MA0162.10.254
MA0163.19.28295e-4
MA0164.10.731
MA0258.10.021
MA0259.10.206



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12732

Novel motifP-value
10.0645
100.00927
1000.948
1010.0443
1020.458
1030.796
1040.786
1050.944
1060.805
1070.0562
1080.816
1090.26
110.125
1100.128
1110.412
1120.187
1130.328
1140.00112
1150.236
1160.245
1170.0402
1180.588
1190.952
120.106
1200.375
1210.614
1220.288
1230.00788
1240.125
1250.439
1260.731
1270.306
1280.741
1290.132
130.703
1300.21
1310.205
1320.15
1330.0978
1340.234
1350.447
1360.533
1370.0945
1380.217
1393.36072e-4
140.782
1400.264
1410.244
1420.445
1430.629
1440.919
1450.831
1460.248
1470.477
1480.119
1490.678
150.418
1500.971
1510.526
1520.0695
1530.61
1540.416
1550.357
1560.8
1570.655
1580.203
1590.749
160.747
1600.736
1610.485
1620.432
1630.343
1640.237
1650.307
1660.789
1670.738
1680.788
1690.535
170.593
180.166
190.11
20.771
200.885
210.296
220.609
230.545
240.514
250.433
260.0996
270.871
280.789
290.634
30.164
300.0748
310.876
320.0172
330.195
340.509
350.00139
360.42
370.676
380.759
390.331
40.571
400.309
410.0415
420.344
430.162
440.347
450.391
460.0763
470.473
480.494
490.0343
50.302
500.421
510.946
520.618
530.181
540.834
550.0361
560.483
570.344
580.184
590.885
60.206
600.394
610.4
620.0482
630.934
640.2
650.548
660.133
670.325
680.0828
690.738
70.313
700.00382
710.0294
720.912
730.753
740.192
750.068
760.129
770.521
780.483
790.824
80.322
800.153
810.0406
820.0934
830.256
840.935
850.02
860.151
870.37
880.996
890.635
90.4
900.874
910.198
920.365
930.379
940.155
950.603
960.631
970.908
980.0191
990.0124



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs12732


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0000255 (eukaryotic cell)
1000497 (kidney cell)
0002518 (kidney epithelial cell)
1000449 (epithelial cell of nephron)
1000507 (kidney tubule cell)
1000494 (nephron tubule epithelial cell)

UBERON: Anatomy
0000468 (multi-cellular organism)
0002113 (kidney)
0002100 (trunk)
0000483 (epithelium)
0000479 (tissue)
0000064 (organ part)
0000062 (organ)
0004111 (anatomical conduit)
0000475 (organism subdivision)
0006555 (excretory tube)
0006554 (urinary system structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0003914 (epithelial tube)
0000025 (tube)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0000119 (cell layer)
0003103 (compound organ)
0009569 (subdivision of trunk)
0004211 (nephron epithelium)
0009773 (renal tubule)
0000489 (cavitated compound organ)
0005177 (trunk region element)
0005172 (abdomen element)
0001231 (nephron tubule)
0004819 (kidney epithelium)
0005173 (abdominal segment element)
0004810 (nephron tubule epithelium)
0001285 (nephron)
0011143 (upper urinary tract)
0001008 (renal system)
0002417 (abdominal segment of trunk)
0007684 (uriniferous tubule)
0000916 (abdomen)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000151 (human renal epithelial cell sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
NA

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