FFCP PHASE1:Hg19::chr10:33623574..33623603,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:33623574..33623603,- to FFCP PHASE1:Hg19::chr10:33623574..33623603,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8829 | |EntrezGene=8829 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8004 | |HGNC=8004 | ||
|TSSclassifier=strong | |||
|UniProt=E9PHT1 | |UniProt=E9PHT1 | ||
|association_with_transcript=-4bp_to_ENST00000374822,ENST00000374828_5end | |||
|cluster_id=chr10:33623574..33623603,- | |||
|description=CAGE_peak_2_at_NRP1_5end | |||
|id=chr10:33623574..33623603,- | |||
|ontology_enrichment_celltype=CL:0000055!2.14e-33!180;CL:0000057!2.47e-23!75;CL:0000222!2.53e-20!119;CL:0000680!1.41e-18!57;CL:0000056!1.41e-18!57;CL:0000355!1.41e-18!57;CL:0000183!2.40e-18!59;CL:0000187!9.99e-18!54;CL:0000393!6.98e-15!60;CL:0000211!6.98e-15!60;CL:0000220!1.25e-14!246;CL:0002321!3.42e-14!248;CL:0000192!7.57e-14!42;CL:0000514!7.57e-14!42;CL:0000359!1.35e-12!32;CL:0002620!1.54e-11!23;CL:0002371!3.83e-10!591;CL:0000548!1.68e-09!679;CL:0000004!1.68e-09!679;CL:0000255!1.68e-09!679;CL:0000144!4.68e-09!625;CL:0000012!7.74e-09!682 | |||
|ontology_enrichment_celltype_v019=CL:0000359;6.37e-12;32!CL:0002620;1.33e-11;23!CL:0000192;1.64e-10;43!CL:0000187;6.17e-10;55!CL:0000057;2.34e-09;73!CL:0000393;1.47e-08;61!CL:0000211;1.47e-08;61!CL:0000134;1.33e-07;55!CL:0000723;2.26e-07;61!CL:0002320;5.79e-07;188!CL:0000048;6.26e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.66e-23,76;CL:0000222,8.61e-21,121;CL:0000680,5.10e-19,58;CL:0000056,5.10e-19,58;CL:0000355,5.10e-19,58;CL:0000187,3.67e-18,55;CL:0000393,5.81e-15,61;CL:0000211,5.81e-15,61;CL:0002321,2.80e-14,250;CL:0000192,3.02e-14,43;CL:0000514,3.02e-14,43;CL:0000359,1.13e-12,32;CL:0002620,1.30e-11,23 | |||
|ontology_enrichment_development_v019=CL:0000514;1.64e-10;43!CL:0000355;3.96e-10;58 | |||
|ontology_enrichment_disease=DOID:2394!6.35e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;8.64e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,8.69e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0005256!5.99e-24!143;UBERON:0000914!1.28e-22!83;UBERON:0002329!1.28e-22!83;UBERON:0003077!1.28e-22!83;UBERON:0003059!1.28e-22!83;UBERON:0007282!1.28e-22!83;UBERON:0009618!1.28e-22!83;UBERON:0007285!1.28e-22!83;UBERON:0004290!1.02e-20!70;UBERON:0002100!7.08e-20!216;UBERON:0000486!3.16e-19!82;UBERON:0003914!7.76e-19!118;UBERON:0002049!1.04e-18!79;UBERON:0007798!1.04e-18!79;UBERON:0000468!4.93e-18!659;UBERON:0000475!1.65e-17!365;UBERON:0001134!1.93e-17!61;UBERON:0002036!1.93e-17!61;UBERON:0003082!1.93e-17!61;UBERON:0002385!8.70e-17!63;UBERON:0001015!8.70e-17!63;UBERON:0000383!8.70e-17!63;UBERON:0000490!1.44e-16!138;UBERON:0004872!5.20e-16!84;UBERON:0000055!2.19e-15!69;UBERON:0000467!6.14e-15!625;UBERON:0001981!9.51e-15!60;UBERON:0007500!9.51e-15!60;UBERON:0004537!9.51e-15!60;UBERON:0006965!9.51e-15!60;UBERON:0000480!1.37e-14!626;UBERON:0001637!1.85e-14!42;UBERON:0003509!1.85e-14!42;UBERON:0004572!1.85e-14!42;UBERON:0000119!1.25e-13!312;UBERON:0001009!1.76e-13!113;UBERON:0004535!2.07e-13!110;UBERON:0003104!4.76e-13!238;UBERON:0009142!4.76e-13!238;UBERON:0003102!4.99e-13!95;UBERON:0000483!5.71e-13!309;UBERON:0004573!7.15e-13!33;UBERON:0004571!7.15e-13!33;UBERON:0000926!1.38e-11!448;UBERON:0004120!1.38e-11!448;UBERON:0006603!1.38e-11!448;UBERON:0000481!2.21e-11!347;UBERON:0002199!3.22e-11!45;UBERON:0002416!3.22e-11!45;UBERON:0002097!2.78e-10!40;UBERON:0000477!3.98e-10!286;UBERON:0002050!2.45e-09!605;UBERON:0005423!2.45e-09!605;UBERON:0000923!4.08e-09!604;UBERON:0005291!4.08e-09!604;UBERON:0006598!4.08e-09!604;UBERON:0002532!4.08e-09!604;UBERON:0000922!6.99e-09!612;UBERON:0004111!9.30e-09!241;UBERON:0000947!2.98e-08!21;UBERON:0010191!2.98e-08!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;4.43e-12;33!UBERON:0004571;4.43e-12;33!UBERON:0001637;6.71e-11;42!UBERON:0003509;6.71e-11;42!UBERON:0004572;6.71e-11;42!UBERON:0007500;1.55e-08;56!UBERON:0001981;1.55e-08;56!UBERON:0004537;1.55e-08;56!UBERON:0000055;2.12e-08;65!UBERON:0000947;2.80e-08;21!UBERON:0010191;2.80e-08;21!UBERON:0002049;3.03e-08;75!UBERON:0007798;3.03e-08;75!UBERON:0002385;3.59e-08;31!UBERON:0001015;3.59e-08;31!UBERON:0000383;3.59e-08;31!UBERON:0002097;4.97e-08;41!UBERON:0002199;7.96e-08;46!UBERON:0002416;7.96e-08;46!UBERON:0003914;2.15e-07;74!UBERON:0002384;8.35e-07;198!UBERON:0003102;9.60e-07;50 | |||
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| ||
|short_description=p2@NRP1 | |||
}} | }} |
Latest revision as of 01:00, 18 September 2015
Short description: | p2@NRP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NRP1_5end |
Coexpression cluster: | NA |
Association with transcript: | -4bp_to_ENST00000374822, ENST00000374828_5end |
EntrezGene: | NRP1 |
HGNC: | 8004 |
UniProt: | E9PHT1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.66e-23 | 76 |
mesodermal cell | 8.61e-21 | 121 |
muscle precursor cell | 5.10e-19 | 58 |
myoblast | 5.10e-19 | 58 |
multi-potent skeletal muscle stem cell | 5.10e-19 | 58 |
muscle cell | 3.67e-18 | 55 |
electrically responsive cell | 5.81e-15 | 61 |
electrically active cell | 5.81e-15 | 61 |
embryonic cell | 2.80e-14 | 250 |
smooth muscle cell | 3.02e-14 | 43 |
smooth muscle myoblast | 3.02e-14 | 43 |
vascular associated smooth muscle cell | 1.13e-12 | 32 |
skin fibroblast | 1.30e-11 | 23 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 8.69e-08 | 14 |