FFCP PHASE1:Hg19::chr10:73501016..73501041,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:73501016..73501041,+ | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_at_chr10:73501016..73501041,+ | |||
|id=chr10:73501016..73501041,+ | |||
|ontology_enrichment_celltype=CL:0000791!6.58e-40!18;CL:0000789!6.58e-40!18;CL:0002420!6.58e-40!18;CL:0002419!6.58e-40!18;CL:0000790!6.58e-40!18;CL:0000084!6.18e-34!25;CL:0000827!6.18e-34!25;CL:0000625!6.27e-28!11;CL:0000838!8.93e-19!52;CL:0000542!2.64e-18!53;CL:0000051!2.64e-18!53;CL:0000624!3.32e-16!6;CL:0000738!4.54e-11!140;CL:0002087!1.72e-10!119;CL:0000842!7.37e-09!3;CL:0000898!1.01e-08!3;CL:0000623!2.59e-08!3;CL:0000825!2.59e-08!3;CL:0000767!1.11e-07!3;CL:0000037!1.54e-07!172;CL:0000566!1.54e-07!172;CL:0002031!3.18e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0000791;5.87e-59;18!CL:0000789;5.87e-59;18!CL:0002419;5.87e-59;18!CL:0000084;3.01e-41;25!CL:0000625;8.56e-41;11!CL:0000624;2.26e-23;6!CL:0000542;1.48e-12;53!CL:0000226;1.78e-12;3!CL:0000842;1.78e-12;3!CL:0000898;2.62e-12;3!CL:0000623;1.29e-11;3!CL:0000815;1.03e-08;2!CL:0000792;1.03e-08;2!CL:0002677;1.03e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,6.46e-59,18;CL:0000789,6.46e-59,18;CL:0002420,6.46e-59,18;CL:0002419,6.46e-59,18;CL:0000790,6.46e-59,18;CL:0000084,3.23e-41,25;CL:0000827,3.23e-41,25;CL:0000625,8.43e-41,11;CL:0000838,8.03e-25,52;CL:0000542,2.94e-24,53;CL:0000051,2.94e-24,53;CL:0000624,2.54e-23,6;CL:0002087,1.56e-14,115;CL:0000738,1.61e-12,136;CL:0000226,2.12e-12,3;CL:0000842,2.12e-12,3;CL:0000898,3.37e-12,3;CL:0000623,1.37e-11,3;CL:0000825,1.37e-11,3;CL:0002031,5.64e-10,120;CL:0000037,5.21e-09,168;CL:0000815,1.21e-08,2;CL:0000792,1.21e-08,2;CL:0002677,1.21e-08,2;CL:0000988,2.94e-08,177 | |||
|ontology_enrichment_development_v019=CL:0000790;5.87e-59;18!CL:0000051;1.48e-12;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.22e-23!15;UBERON:0000179!1.22e-23!15;UBERON:0000463!1.22e-23!15;UBERON:0004177!4.24e-08!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.16e-35;15!UBERON:0000179;6.16e-35;15!UBERON:0000463;6.16e-35;15!UBERON:0002390;2.92e-14;32!UBERON:0002193;2.59e-11;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.64e-35,15;UBERON:0000179,5.64e-35,15;UBERON:0000463,5.64e-35,15 | |||
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| ||
|short_description=p@chr10:73501016..73501041,+ | |||
}} | }} |
Latest revision as of 15:16, 23 July 2015
Short description: | p@chr10:73501016..73501041, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:73501016..73501041, + |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 6.46e-59 | 18 |
alpha-beta T cell | 6.46e-59 | 18 |
immature T cell | 6.46e-59 | 18 |
mature T cell | 6.46e-59 | 18 |
immature alpha-beta T cell | 6.46e-59 | 18 |
T cell | 3.23e-41 | 25 |
pro-T cell | 3.23e-41 | 25 |
CD8-positive, alpha-beta T cell | 8.43e-41 | 11 |
lymphoid lineage restricted progenitor cell | 8.03e-25 | 52 |
lymphocyte | 2.94e-24 | 53 |
common lymphoid progenitor | 2.94e-24 | 53 |
CD4-positive, alpha-beta T cell | 2.54e-23 | 6 |
nongranular leukocyte | 1.56e-14 | 115 |
leukocyte | 1.61e-12 | 136 |
single nucleate cell | 2.12e-12 | 3 |
mononuclear cell | 2.12e-12 | 3 |
naive T cell | 3.37e-12 | 3 |
natural killer cell | 1.37e-11 | 3 |
pro-NK cell | 1.37e-11 | 3 |
hematopoietic lineage restricted progenitor cell | 5.64e-10 | 120 |
hematopoietic stem cell | 5.21e-09 | 168 |
regulatory T cell | 1.21e-08 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.21e-08 | 2 |
naive regulatory T cell | 1.21e-08 | 2 |
hematopoietic cell | 2.94e-08 | 177 |
Ontology term | p-value | n |
---|---|---|
blood | 5.64e-35 | 15 |
haemolymphatic fluid | 5.64e-35 | 15 |
organism substance | 5.64e-35 | 15 |