FFCP PHASE1:Hg19::chr11:104035019..104035054,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:104035019..104035054,- to FFCP PHASE1:Hg19::chr11:104035019..104035054,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=80310 | |EntrezGene=80310 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30620 | |HGNC=30620 | ||
|TSSclassifier=strong | |||
|UniProt=Q9GZP0 | |UniProt=Q9GZP0 | ||
|association_with_transcript=0bp_to_NM_025208,NM_033135,uc001php.2,uc001phq.2_5end | |||
|cluster_id=chr11:104035019..104035054,- | |||
|coexpression_cluster_id=C1327 | |||
|description=CAGE_peak_4_at_PDGFD_5end | |||
|id=chr11:104035019..104035054,- | |||
|ontology_enrichment_celltype=CL:0000136!6.97e-11!15 | |||
|ontology_enrichment_celltype_v019=CL:0000136;1.08e-13;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,9.95e-16,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.35e-12!115;UBERON:0000475!1.41e-07!365;UBERON:0000153!3.63e-07!129;UBERON:0007811!3.63e-07!129;UBERON:0000924!4.53e-07!173;UBERON:0006601!4.53e-07!173;UBERON:0004121!6.67e-07!169;UBERON:0005743!7.76e-07!86;UBERON:0000033!8.13e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;2.07e-08;9!UBERON:0000042;2.07e-08;9!UBERON:0003688;1.38e-07;6!UBERON:0002358;1.38e-07;6!UBERON:0003684;1.38e-07;6!UBERON:0001178;1.38e-07;6!UBERON:0004905;5.50e-07;8!UBERON:0000982;5.50e-07;8!UBERON:0004770;5.50e-07;8!UBERON:0001013;8.31e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.14e-07,6;UBERON:0002358,1.14e-07,6;UBERON:0003684,1.14e-07,6;UBERON:0001178,1.14e-07,6;UBERON:0001013,4.10e-07,14;UBERON:0004905,5.50e-07,8;UBERON:0000982,5.50e-07,8;UBERON:0004770,5.50e-07,8 | |||
|phase1_expression=9.6289541013395,9.20632252731228,9.16203626623813,11.0080628188443,11.1740273606822,11.3404008133048,2.53299878168311,1.89515962028049,3.91778442299758,0,0,0.436882744260345,0,4.45558870656168,3.97676850873499,0,1.80808358407193,2.92124036154949,1.46379839637152,0.492484232307152,0,0,5.72471974262113,1.77936752594749,1.12988375635323,0,0,0,0,0,0.464448369948228,0,0,0,0.309868802321207,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,1.32171328579026,0,0.526768169550154,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14966148080576,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0,1.64225599384209,1.00803371612366,0.534880391567015,0.144824403882799,9.75227465255847,2.01210257911091,2.42938867502708,0,0,0.144846518960824,1.5905718941022,0,0.378139268656271,0,0.43917392846563,0.589405839739707,0.364295288292542,0,0,0,0,0,0,0,0,0,0.347140501607594,1.69592382577203,0,0.825354125820202,0.208994966536811,1.8089173141853,3.5576626268671,1.00416183829401,0.402829317109147,0,0.488124115096339,0,0,0.357198913136319,0.22452937262617,0.788280363383256,0,0,0.549605231791222,0,0,0,0,0.506522046658319,0.529636723252875,3.72887606973458,3.19201543978521,2.24271040056923,0,0,8.71390899119346,0.67355336034844,0.326923806226917,0.302714855289863,0,0.234321431833797,0,0,0.149448680551801,0,0,0.140450806702248,0.408308342509787,0.122834317311768,2.37649296704261,1.18800285728205,5.43987244412825,0,0.718618141816238,0,0,0.831192346452549,0.877955241761676,0,6.46023653298366,0.680593098960126,0.538168907066586,5.55249210928275,11.2323907614568,0.300091096084402,1.44273540933814,0.515281080091258,1.8611685633159,0.843881661206331,0.974370051611986,0,7.54809168866855,10.5069936932228,1.06502877754984,0.906768884048762,0.169560592310488,0,0.272746120590835,0,0.487894824518382,0.530119073285941,0.348581828608555,0.414644220061482,0.252320850875628,1.09493207722749,0,1.92972281457866,0,1.85747171212792,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,1.47008711385542,0,0,1.18157981336281,0,0,0.857839051492628,0,0,0,0.0925884451585296,0,0,4.3299402607582,0.463721619900307,0.939269553886573,0.144366447761074,0.462985512576611,0.761016608938393,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0,0,0,0.414656231081544,0,0.25248486685276,0,0,1.17217447210047,0,0.616964956219941,0,0.571652865261156,0,0.43596006883328,0,0.517086863031111,7.15312891703765,0,1.86156681609409,1.04007436911366,0,0,0,3.0025378668211,2.71310802695722,0.823240336780769,0.325736184293735,3.19852753868291,0,12.6604538365026,1.74306691720059,4.79870357673874,0,0,0,0,0,0,0.579125226670317,1.43833425785268,0,0,0.591092280605782,0,0.641715181398742,2.28685161800217,0,0,1.17261385734044,1.91381625495949,0,0,0,7.48418099486753,3.00102312635806,3.52644530809656,0.415941723061614,0.178428988797162,0.788512075169673,0.468565659970853,3.31040709700491,2.27407504055985,4.1389228517002,0,0,0.0868836144680828,0,0,0.413536052245775,0.215714200818617,0.106727557803444,0,0,0.30239029332968,3.2254015016441,3.99001130548962,7.01650236082684,4.86928767171664,3.58195074346692,3.86049410744658,1.48418066444991,0.154209693802656,0,0.164254312027618,0.519254429183621,0.116210378459959,0,0.40101294060657,0,0.803701137152247,0.182091168006717,3.01586154406675,0,0.15403067420883,0,0,0.105551628892876,0,0.510281115829547,0.431831832204279,0,0,0,0.254876273045038,0,0,0,0,0.256450125116389,0.328014645699706,0.976135183992909,0.515205058238611,0.366277859273374,1.73269949833235,0,0,0,0.096670718292122,0.154048617114644,0,0,0.214840489736547,0.290033387828457,0.170453254832202,1.95870478422822,0,0,0,0,0.929691098594572,0.31481234683064,0,0.308033580176089,0,0,0,0,0.744316738719335,0.316379424718726,4.95638504201945,0.255897791311334,2.56763392820352,0,0,1.07923474549989,3.84351841630477,2.23843564456804,0.202182481573316,0,0.421258456238981,0,0,0,2.04749867111979,2.54529777516683,1.13008116620243,0,0,0,0,3.27947376023316,0,0.30982349809975,0,0.143411352204052,0.589494246078727,0,0,0.211107635297664,12.5132059324763,0.75894634753143,0.699869440489966,0,0.670302275535787,0,1.03558180854457,0,0,0,0,0,0,0.569647187174163,0,0,1.29694662238543,0,0.79312517629427,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27753871307098,3.09154810280188,0,1.11838053946208,0.834245708559542,0,0,0,0,1.99843180798692,0,0,3.51619630252546,1.57768678274367,0,0,1.43246690842614,2.67268212749375,1.53580351049616,0,0.140669416410513,0,0,0,10.9586393538088,3.31540698637377,0,0.511343412510774,0,0,0,1.07412704805365,0,2.17015492401254,0,0,0.969332746095218,0.556608588971108,0,0,0.0874599999961957,10.8749936315219,0.227586896570999,1.01701460117107,0,1.72371686620732,0,0.520874984799877,0,0.964771509003264,0,0,0.295547618953547,2.4132393686937,0,0.41827123283581,2.92410982314429,0.569710279235006,0,0,0,0.31900115973192,0.915975934018623,0,0,0,0.498635045700469,0,0,0,0,0.635746315921515,0,0,0,0,0,1.32686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| |phase1_expression=9.6289541013395,9.20632252731228,9.16203626623813,11.0080628188443,11.1740273606822,11.3404008133048,2.53299878168311,1.89515962028049,3.91778442299758,0,0,0.436882744260345,0,4.45558870656168,3.97676850873499,0,1.80808358407193,2.92124036154949,1.46379839637152,0.492484232307152,0,0,5.72471974262113,1.77936752594749,1.12988375635323,0,0,0,0,0,0.464448369948228,0,0,0,0.309868802321207,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,1.32171328579026,0,0.526768169550154,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14966148080576,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0,1.64225599384209,1.00803371612366,0.534880391567015,0.144824403882799,9.75227465255847,2.01210257911091,2.42938867502708,0,0,0.144846518960824,1.5905718941022,0,0.378139268656271,0,0.43917392846563,0.589405839739707,0.364295288292542,0,0,0,0,0,0,0,0,0,0.347140501607594,1.69592382577203,0,0.825354125820202,0.208994966536811,1.8089173141853,3.5576626268671,1.00416183829401,0.402829317109147,0,0.488124115096339,0,0,0.357198913136319,0.22452937262617,0.788280363383256,0,0,0.549605231791222,0,0,0,0,0.506522046658319,0.529636723252875,3.72887606973458,3.19201543978521,2.24271040056923,0,0,8.71390899119346,0.67355336034844,0.326923806226917,0.302714855289863,0,0.234321431833797,0,0,0.149448680551801,0,0,0.140450806702248,0.408308342509787,0.122834317311768,2.37649296704261,1.18800285728205,5.43987244412825,0,0.718618141816238,0,0,0.831192346452549,0.877955241761676,0,6.46023653298366,0.680593098960126,0.538168907066586,5.55249210928275,11.2323907614568,0.300091096084402,1.44273540933814,0.515281080091258,1.8611685633159,0.843881661206331,0.974370051611986,0,7.54809168866855,10.5069936932228,1.06502877754984,0.906768884048762,0.169560592310488,0,0.272746120590835,0,0.487894824518382,0.530119073285941,0.348581828608555,0.414644220061482,0.252320850875628,1.09493207722749,0,1.92972281457866,0,1.85747171212792,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,1.47008711385542,0,0,1.18157981336281,0,0,0.857839051492628,0,0,0,0.0925884451585296,0,0,4.3299402607582,0.463721619900307,0.939269553886573,0.144366447761074,0.462985512576611,0.761016608938393,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0,0,0,0.414656231081544,0,0.25248486685276,0,0,1.17217447210047,0,0.616964956219941,0,0.571652865261156,0,0.43596006883328,0,0.517086863031111,7.15312891703765,0,1.86156681609409,1.04007436911366,0,0,0,3.0025378668211,2.71310802695722,0.823240336780769,0.325736184293735,3.19852753868291,0,12.6604538365026,1.74306691720059,4.79870357673874,0,0,0,0,0,0,0.579125226670317,1.43833425785268,0,0,0.591092280605782,0,0.641715181398742,2.28685161800217,0,0,1.17261385734044,1.91381625495949,0,0,0,7.48418099486753,3.00102312635806,3.52644530809656,0.415941723061614,0.178428988797162,0.788512075169673,0.468565659970853,3.31040709700491,2.27407504055985,4.1389228517002,0,0,0.0868836144680828,0,0,0.413536052245775,0.215714200818617,0.106727557803444,0,0,0.30239029332968,3.2254015016441,3.99001130548962,7.01650236082684,4.86928767171664,3.58195074346692,3.86049410744658,1.48418066444991,0.154209693802656,0,0.164254312027618,0.519254429183621,0.116210378459959,0,0.40101294060657,0,0.803701137152247,0.182091168006717,3.01586154406675,0,0.15403067420883,0,0,0.105551628892876,0,0.510281115829547,0.431831832204279,0,0,0,0.254876273045038,0,0,0,0,0.256450125116389,0.328014645699706,0.976135183992909,0.515205058238611,0.366277859273374,1.73269949833235,0,0,0,0.096670718292122,0.154048617114644,0,0,0.214840489736547,0.290033387828457,0.170453254832202,1.95870478422822,0,0,0,0,0.929691098594572,0.31481234683064,0,0.308033580176089,0,0,0,0,0.744316738719335,0.316379424718726,4.95638504201945,0.255897791311334,2.56763392820352,0,0,1.07923474549989,3.84351841630477,2.23843564456804,0.202182481573316,0,0.421258456238981,0,0,0,2.04749867111979,2.54529777516683,1.13008116620243,0,0,0,0,3.27947376023316,0,0.30982349809975,0,0.143411352204052,0.589494246078727,0,0,0.211107635297664,12.5132059324763,0.75894634753143,0.699869440489966,0,0.670302275535787,0,1.03558180854457,0,0,0,0,0,0,0.569647187174163,0,0,1.29694662238543,0,0.79312517629427,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27753871307098,3.09154810280188,0,1.11838053946208,0.834245708559542,0,0,0,0,1.99843180798692,0,0,3.51619630252546,1.57768678274367,0,0,1.43246690842614,2.67268212749375,1.53580351049616,0,0.140669416410513,0,0,0,10.9586393538088,3.31540698637377,0,0.511343412510774,0,0,0,1.07412704805365,0,2.17015492401254,0,0,0.969332746095218,0.556608588971108,0,0,0.0874599999961957,10.8749936315219,0.227586896570999,1.01701460117107,0,1.72371686620732,0,0.520874984799877,0,0.964771509003264,0,0,0.295547618953547,2.4132393686937,0,0.41827123283581,2.92410982314429,0.569710279235006,0,0,0,0.31900115973192,0.915975934018623,0,0,0,0.498635045700469,0,0,0,0,0.635746315921515,0,0,0,0,0,1.32686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| ||
|short_description=p4@PDGFD | |||
}} | }} |
Latest revision as of 19:58, 24 September 2015
Short description: | p4@PDGFD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PDGFD_5end |
Coexpression cluster: | C1327_Adipocyte_glioblastoma_Fibroblast_Cardiac_aorta_eye_Mesothelial |
Association with transcript: | 0bp_to_NM_025208, NM_033135, uc001php.2, uc001phq.2_5end |
EntrezGene: | PDGFD |
HGNC: | 30620 |
UniProt: | Q9GZP0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 9.95e-16 | 15 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.14e-07 | 6 |
peritoneum | 1.14e-07 | 6 |
abdominal cavity | 1.14e-07 | 6 |
visceral peritoneum | 1.14e-07 | 6 |
adipose tissue | 4.10e-07 | 14 |
articulation | 5.50e-07 | 8 |
skeletal joint | 5.50e-07 | 8 |
articular system | 5.50e-07 | 8 |