FFCP PHASE1:Hg19::chr11:117070904..117070918,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:117070904..117070918,+ to FFCP PHASE1:Hg19::chr11:117070904..117070918,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6876 | |EntrezGene=6876 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11553 | |HGNC=11553 | ||
|TSSclassifier=strong | |||
|UniProt=E9PJ32 | |UniProt=E9PJ32 | ||
|association_with_transcript=-52bp_to_ENST00000529792_5end | |||
|cluster_id=chr11:117070904..117070918,+ | |||
|coexpression_cluster_id=C493 | |||
|description=CAGE_peak_4_at_TAGLN_5end | |||
|id=chr11:117070904..117070918,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.68e-21!180;CL:0000359!8.01e-21!32;CL:0000192!3.17e-18!42;CL:0000514!3.17e-18!42;CL:0000680!3.50e-17!57;CL:0000056!3.50e-17!57;CL:0000355!3.50e-17!57;CL:0000187!1.46e-16!54;CL:0000183!3.95e-14!59;CL:0000393!1.07e-13!60;CL:0000211!1.07e-13!60;CL:0000057!2.48e-10!75;CL:0002494!2.24e-08!16;CL:0000222!4.50e-07!119;CL:0002539!5.35e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.82e-29;32!CL:0000192;5.07e-17;43!CL:0002539;9.30e-12;10!CL:0000187;1.56e-09;55!CL:0002594;4.54e-09;4!CL:0000393;1.82e-07;61!CL:0000211;1.82e-07;61!CL:0002595;3.12e-07;5!CL:0002615;3.12e-07;3!CL:0000136;3.97e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,9.46e-31,32;CL:0000192,8.64e-23,43;CL:0000514,8.64e-23,43;CL:0000680,6.75e-18,58;CL:0000056,6.75e-18,58;CL:0000355,6.75e-18,58;CL:0000187,9.89e-18,55;CL:0000393,3.01e-15,61;CL:0000211,3.01e-15,61;CL:0002539,8.08e-12,10;CL:0002594,5.22e-09,4;CL:0000222,1.29e-07,121;CL:0002615,2.37e-07,3;CL:0002595,2.72e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000514;5.07e-17;43!CL:0000355;4.40e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;1.05e-07;3!DOID:127;1.05e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.06e-07,3;DOID:127,1.06e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0002385!1.56e-17!63;UBERON:0001015!1.56e-17!63;UBERON:0000383!1.56e-17!63;UBERON:0001637!7.14e-17!42;UBERON:0003509!7.14e-17!42;UBERON:0004572!7.14e-17!42;UBERON:0004872!1.45e-16!84;UBERON:0001134!3.86e-16!61;UBERON:0002036!3.86e-16!61;UBERON:0003082!3.86e-16!61;UBERON:0000914!1.14e-15!83;UBERON:0002329!1.14e-15!83;UBERON:0003077!1.14e-15!83;UBERON:0003059!1.14e-15!83;UBERON:0007282!1.14e-15!83;UBERON:0009618!1.14e-15!83;UBERON:0007285!1.14e-15!83;UBERON:0001981!3.86e-15!60;UBERON:0007500!3.86e-15!60;UBERON:0004537!3.86e-15!60;UBERON:0006965!3.86e-15!60;UBERON:0004290!2.71e-14!70;UBERON:0005256!3.55e-14!143;UBERON:0004573!3.77e-14!33;UBERON:0004571!3.77e-14!33;UBERON:0003914!1.24e-13!118;UBERON:0000055!1.82e-13!69;UBERON:0002049!2.58e-13!79;UBERON:0007798!2.58e-13!79;UBERON:0004535!4.56e-12!110;UBERON:0002100!7.19e-12!216;UBERON:0001009!2.46e-11!113;UBERON:0000486!5.17e-11!82;UBERON:0000490!2.34e-08!138;UBERON:0001135!2.11e-07!15;UBERON:0003104!2.31e-07!238;UBERON:0009142!2.31e-07!238;UBERON:0003513!2.76e-07!8;UBERON:0000926!3.15e-07!448;UBERON:0004120!3.15e-07!448;UBERON:0006603!3.15e-07!448;UBERON:0000948!3.86e-07!24;UBERON:0005498!3.86e-07!24;UBERON:0004140!3.86e-07!24;UBERON:0009881!3.86e-07!24;UBERON:0004141!3.86e-07!24;UBERON:0003084!3.86e-07!24;UBERON:0007005!3.86e-07!24;UBERON:0004139!3.86e-07!24;UBERON:0004291!3.86e-07!24;UBERON:0000475!4.65e-07!365;UBERON:0004237!5.35e-07!10;UBERON:0004695!5.35e-07!10;UBERON:0002111!5.35e-07!10;UBERON:0004178!5.35e-07!10;UBERON:0003688!6.53e-07!6;UBERON:0002358!6.53e-07!6;UBERON:0003684!6.53e-07!6;UBERON:0001178!6.53e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.49e-16;33!UBERON:0004571;1.49e-16;33!UBERON:0001637;5.30e-15;42!UBERON:0003509;5.30e-15;42!UBERON:0004572;5.30e-15;42!UBERON:0004237;9.30e-12;10!UBERON:0004695;9.30e-12;10!UBERON:0002111;9.30e-12;10!UBERON:0004178;9.30e-12;10!UBERON:0001135;2.49e-11;15!UBERON:0001310;4.54e-09;4!UBERON:0003688;3.06e-08;6!UBERON:0002358;3.06e-08;6!UBERON:0003684;3.06e-08;6!UBERON:0001178;3.06e-08;6!UBERON:0007500;6.22e-08;56!UBERON:0001981;6.22e-08;56!UBERON:0004537;6.22e-08;56!UBERON:0003513;1.58e-07;7!UBERON:0000947;2.42e-07;21!UBERON:0010191;2.42e-07;21!UBERON:0003834;3.12e-07;5!UBERON:0001533;3.12e-07;5!UBERON:0006947;4.62e-07;3!UBERON:0004054;4.62e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,4.00e-23,42;UBERON:0003509,4.00e-23,42;UBERON:0004572,4.00e-23,42;UBERON:0004573,4.99e-19,33;UBERON:0004571,4.99e-19,33;UBERON:0002385,2.97e-18,64;UBERON:0001015,2.97e-18,64;UBERON:0000383,2.97e-18,64;UBERON:0001134,3.08e-16,62;UBERON:0002036,3.08e-16,62;UBERON:0003082,3.08e-16,62;UBERON:0007500,7.87e-16,59;UBERON:0001981,7.87e-16,59;UBERON:0004537,7.87e-16,59;UBERON:0006965,7.87e-16,59;UBERON:0002329,2.20e-14,71;UBERON:0003059,2.20e-14,71;UBERON:0007282,2.20e-14,71;UBERON:0004290,2.20e-14,71;UBERON:0009618,2.20e-14,71;UBERON:0003077,4.47e-14,72;UBERON:0007285,4.47e-14,72;UBERON:0000055,5.31e-14,68;UBERON:0007524,8.91e-14,73;UBERON:0002049,1.72e-13,78;UBERON:0007798,1.72e-13,78;UBERON:0004872,2.39e-13,83;UBERON:0005256,5.40e-13,122;UBERON:0007503,2.12e-12,78;UBERON:0003914,5.08e-12,117;UBERON:0002100,6.26e-12,199;UBERON:0004237,8.08e-12,10;UBERON:0004695,8.08e-12,10;UBERON:0002111,8.08e-12,10;UBERON:0004178,8.08e-12,10;UBERON:0001135,2.60e-11,15;UBERON:0000486,3.37e-11,83;UBERON:0004535,8.94e-11,109;UBERON:0001009,2.94e-10,112;UBERON:0001310,5.22e-09,4;UBERON:0003104,6.32e-09,160;UBERON:0009142,6.32e-09,160;UBERON:0003688,2.74e-08,6;UBERON:0002358,2.74e-08,6;UBERON:0003684,2.74e-08,6;UBERON:0001178,2.74e-08,6;UBERON:0000490,3.20e-08,148;UBERON:0003513,1.18e-07,7;UBERON:0000926,1.63e-07,315;UBERON:0004120,1.63e-07,315;UBERON:0006603,1.63e-07,315;UBERON:0003834,2.72e-07,5;UBERON:0001533,2.72e-07,5;UBERON:0000947,2.83e-07,21;UBERON:0010191,2.83e-07,21;UBERON:0006947,3.45e-07,3;UBERON:0004054,3.45e-07,3 | |||
|phase1_expression=2.72517568905835,2.14100523890983,2.81908808191942,6.00439790118782,3.5756887554183,2.61701557230111,10.1319951267324,0,0,2.21160542851358,0.697801167972428,0,0,0,0.331397375727916,3.36162573225888,3.61616716814386,1.46062018077475,3.90346239032406,0,0,0.313454721478088,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,2.04580098949649,0.361439152384566,0,0.144846518960824,0,0,0,0,0.087834785693126,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,0.759783069987479,1.05927344650575,0.286836620748814,0.354668382198357,2.80338800071154,2.1349799145941,2.71334303258876,0.622422070799533,0.269421344139376,0.490385709340376,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,1.97813543422845,0.910161361938026,2.15585442544872,0,0,0,0.438977620880838,1.22595118319608,2.10333282469236,1.24775401476023,0.358779271377724,1.06778694409284,0,0,0.103052529238439,0,0.558350568994769,0,0.876933046450788,0,0.0920498986422993,0.161646056818812,3.90510551768276,1.61203357164224,0.847802961552438,0,0,0,0,0,0,0,0,0,1.56449532329816,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80483547606892,1.2347220339942,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34817388471643,0,0,0,0,0,0,0,0,0.93733833986777,0.671928512795438,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0.129271715757778,3.57656445851882,0,3.19125739901845,4.16029747645464,0,0,0,0.714889968290738,0,0,0,0.355391948742546,0,1.80863626235752,9.58686804460323,4.99864955910285,0,0,0,0.958499421966331,2.29723871668228,0,1.73737568001095,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0.271265023699736,4.36738809214695,2.3195768543631,1.26161932027148,2.45996971484698,2.10662269809403,2.27407504055985,1.03473071292505,1.32845119707087,1.65932251687533,0,0,0,0,0,0,0,0,0,1.24053903909388,1.07423381301644,2.52594084989766,0.512556597022804,1.53512174720011,1.12597744800525,0,0.308419387605311,0.177561725313127,0,0,0.697262270759755,0,0.200506470303285,0,0.229628896329213,0,0.262248829918848,0,0,0.784349769176855,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0.145016693914229,0,0.178064071293475,0,0,0,0,7.43752878875657,2.20368642781448,1.3940745403212,0,1.59691809095107,0,1.66791797193528,4.00749682877575,0,3.48017367190598,1.5250415513906,0.511795582622668,0,0,3.13979456079692,0.179872457583315,0,0,3.23491970517306,1.58510321173008,1.68503382495592,0,1.46228093778771,12.6780176108107,1.09199929126389,0,0,0.551365343546124,3.98063385144732,9.20746859032902,0.578775534266688,0,10.5513396020606,3.717881977197,1.12678241012897,0.143411352204052,0.294747123039363,9.98678944147501,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19548792950642,0,0,0,0,4.97663340258892,0,0,0,1.38100767891707,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23120413606075,0.227884111694002,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,4.97630965539252,2.29989667708682,2.4441205797345,0,0,0,0,0,0,0,0,0,9.07544126553598,0,0,0.63186579628488,0,0,0,0,0,0,0,0,0,0,0,1.92199335066233,0,0,0,0,1.84279131327997,0.0882561266915003,0.225980740780532,0,0,0,0,0,2.98834192635094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0.458320848023367,0,0,0,0,0,9.7280968556449,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,2.034148301238,4.3439968140297,7.77799342081141,5.87857248196936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544017803369474,0,0,0,0,0,0,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0.467426619694449,0,0,0,0,0.228840068396924,0,0,0.443565449968902,0.477890301491107,0,0.465788870628778,0,0,3.1304703708704,1.50257608997218,2.28483127301277,0,1.27294061441792,0.644463342254931,0.928067519756987,2.78667122089031,0.400027764663154,0.686791410365586,0.673498977531838,0,0,0.857766365499703,0,0,0,0,0,0.617602894321944,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0.352675943690684,0.918736432059601,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0.381382095467167,0,0,0.601682626794058,0,0,0,0,0,0,0,0,0,0,0,3.96968942711435,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,1.25588948560822,0,0,0.913158720509496,0,0,0.500335809236594,0,0,0,0,0,0,0,0.860454717640555,0,0,4.23387050190929,0,0,0,0,0,0,0,0.307988420568741,0,0,0,0,0,0,0,0,1.00326405540328,0,0,2.69663153929296,0,0.196308467114945,0,0,2.0391253762538,0.0939839179798536,0,0,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0,0.5290268405154,3.34795516350076,0.462175628631418,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0,0,0,0,0,0.0636471582781649,0,0.870866991587845,0,0.134704106029175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| ||
|short_description=p4@TAGLN | |||
}} | }} |
Latest revision as of 20:53, 15 September 2015
Short description: | p4@TAGLN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TAGLN_5end |
Coexpression cluster: | C493_Adipocyte_basal_Mesenchymal_Smooth_mesenchymal_Aortic_Multipotent |
Association with transcript: | -52bp_to_ENST00000529792_5end |
EntrezGene: | TAGLN |
HGNC: | 11553 |
UniProt: | E9PJ32 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 9.46e-31 | 32 |
smooth muscle cell | 8.64e-23 | 43 |
smooth muscle myoblast | 8.64e-23 | 43 |
muscle precursor cell | 6.75e-18 | 58 |
myoblast | 6.75e-18 | 58 |
multi-potent skeletal muscle stem cell | 6.75e-18 | 58 |
muscle cell | 9.89e-18 | 55 |
electrically responsive cell | 3.01e-15 | 61 |
electrically active cell | 3.01e-15 | 61 |
aortic smooth muscle cell | 8.08e-12 | 10 |
smooth muscle cell of the umbilical artery | 5.22e-09 | 4 |
mesodermal cell | 1.29e-07 | 121 |
adipocyte of omentum tissue | 2.37e-07 | 3 |
smooth muscle cell of the subclavian artery | 2.72e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.06e-07 | 3 |
leiomyoma | 1.06e-07 | 3 |