FFCP PHASE1:Hg19::chr12:47628434..47628438,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-407bp_to_CU678929_5end | |||
|cluster_id=chr12:47628434..47628438,+ | |||
|description=CAGE_peak_1_at_CU678929_5end | |||
|id=chr12:47628434..47628438,+ | |||
|ontology_enrichment_celltype=CL:0000039!1.28e-12!7;CL:0000586!1.28e-12!7;CL:0000066!3.14e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0000322;9.43e-11;3!CL:0000082;5.75e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,8.99e-11,3;CL:0000076,1.13e-07,63;CL:0000082,5.66e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0008814;1.54e-15;2!UBERON:0010056;1.54e-15;2 | |||
|ontology_enrichment_disease=DOID:1749!6.58e-26!14;DOID:305!3.76e-22!106;DOID:14566!4.94e-22!239;DOID:0050687!1.51e-21!143;DOID:162!1.76e-21!235;DOID:0050686!2.36e-08!137 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.14e-32;14!DOID:1325;3.02e-17;7!DOID:3904;3.02e-17;7!DOID:3910;1.91e-15;2!DOID:1324;1.39e-08;15!DOID:0050615;4.19e-08;16!DOID:3908;5.87e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.14e-32,14;DOID:1325,2.90e-17,7;DOID:3904,2.90e-17,7;DOID:3910,1.78e-15,2;DOID:305,7.18e-10,106;DOID:1324,1.37e-08,15;DOID:0050615,4.11e-08,16;DOID:0050687,2.36e-07,143;DOID:3908,5.70e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0003343!3.91e-09!4;UBERON:0004785!3.91e-09!4;UBERON:0000344!1.33e-07!12;UBERON:0003729!2.21e-07!5;UBERON:0000473!2.49e-07!8;UBERON:0004176!3.82e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;1.91e-15;2!UBERON:0002173;1.91e-15;2!UBERON:0002186;1.91e-15;2!UBERON:0001723;8.17e-11;3!UBERON:0001033;8.17e-11;3!UBERON:0004821;9.43e-11;3!UBERON:0007499;9.43e-11;3!UBERON:0003215;9.43e-11;3!UBERON:0010368;9.43e-11;3!UBERON:0009911;9.43e-11;3!UBERON:0002299;9.43e-11;3!UBERON:0006524;9.43e-11;3!UBERON:0008874;9.43e-11;3!UBERON:0002169;9.43e-11;3!UBERON:0004894;9.43e-11;3!UBERON:0003343;1.96e-08;4!UBERON:0004785;1.96e-08;4!UBERON:0009856;2.18e-08;4!UBERON:0004802;5.75e-07;19!UBERON:0000115;5.75e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,1.78e-15,2;UBERON:0002173,1.78e-15,2;UBERON:0002186,1.78e-15,2;UBERON:0001723,8.17e-11,3;UBERON:0001033,8.17e-11,3;UBERON:0010056,8.17e-11,3;UBERON:0004821,8.99e-11,3;UBERON:0003215,8.99e-11,3;UBERON:0010368,8.99e-11,3;UBERON:0009911,8.99e-11,3;UBERON:0002299,8.99e-11,3;UBERON:0006524,8.99e-11,3;UBERON:0008874,8.99e-11,3;UBERON:0002169,8.99e-11,3;UBERON:0004894,8.99e-11,3;UBERON:0003343,1.96e-08,4;UBERON:0004785,1.96e-08,4;UBERON:0004802,5.66e-07,19;UBERON:0000115,5.66e-07,19 | |||
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| ||
|short_description=p1@CU678929 | |||
}} | }} |
Latest revision as of 08:45, 24 July 2015
Short description: | p1@CU678929 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CU678929_5end |
Coexpression cluster: | NA |
Association with transcript: | -407bp_to_CU678929_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 8.99e-11 | 3 |
squamous epithelial cell | 1.13e-07 | 63 |
epithelial cell of lung | 5.66e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 1.78e-15 | 2 |
alveolar duct | 1.78e-15 | 2 |
bronchiole | 1.78e-15 | 2 |
tongue | 8.17e-11 | 3 |
gustatory system | 8.17e-11 | 3 |
future tongue | 8.17e-11 | 3 |
pulmonary alveolus epithelium | 8.99e-11 | 3 |
alveolus | 8.99e-11 | 3 |
pulmonary lobule | 8.99e-11 | 3 |
lobule | 8.99e-11 | 3 |
alveolus of lung | 8.99e-11 | 3 |
alveolar system | 8.99e-11 | 3 |
pulmonary acinus | 8.99e-11 | 3 |
alveolar sac | 8.99e-11 | 3 |
alveolar wall | 8.99e-11 | 3 |
mucosa of oral region | 1.96e-08 | 4 |
respiratory system mucosa | 1.96e-08 | 4 |
respiratory tract epithelium | 5.66e-07 | 19 |
lung epithelium | 5.66e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.14e-32 | 14 |
bronchus cancer | 2.90e-17 | 7 |
bronchogenic carcinoma | 2.90e-17 | 7 |
lung adenocarcinoma | 1.78e-15 | 2 |
carcinoma | 7.18e-10 | 106 |
lung cancer | 1.37e-08 | 15 |
respiratory system cancer | 4.11e-08 | 16 |
cell type cancer | 2.36e-07 | 143 |
non-small cell lung carcinoma | 5.70e-07 | 5 |