FFCP PHASE1:Hg19::chr12:6234045..6234103,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:6234045..6234103,- to FFCP PHASE1:Hg19::chr12:6234045..6234103,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7450 | |EntrezGene=7450 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12726 | |HGNC=12726 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-109bp_to_ENST00000538635_5end | |||
|cluster_id=chr12:6234045..6234103,- | |||
|coexpression_cluster_id=C428 | |||
|description=CAGE_peak_6_at_VWF_5end | |||
|id=chr12:6234045..6234103,- | |||
|ontology_enrichment_celltype=CL:0002139!1.38e-30!24;CL:0000115!1.19e-29!35;CL:0002078!1.28e-21!44;CL:0000071!4.05e-21!18;CL:0002546!4.05e-21!18;CL:0000213!1.29e-14!57;CL:0000215!1.29e-14!57;CL:1000413!2.91e-11!9;CL:0005020!3.11e-11!6;CL:0002138!3.11e-11!6;CL:0005022!3.11e-11!6;CL:0002544!3.38e-07!6;CL:0002543!6.45e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002139;6.89e-45;24!CL:0000115;1.84e-40;36!CL:0000071;8.88e-30;18!CL:0002078;8.99e-23;45!CL:1000413;2.09e-17;9!CL:0002138;3.84e-17;6!CL:0000213;7.24e-16;58!CL:0000215;7.24e-16;58!CL:0002544;8.26e-11;6!CL:0002144;2.43e-09;3!CL:0002188;1.51e-08;5!CL:0002618;1.53e-08;3!CL:0002543;3.43e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,2.03e-47,36;CL:0002139,5.27e-45,24;CL:0002078,2.71e-36,45;CL:0000071,6.71e-30,18;CL:0002546,6.71e-30,18;CL:0000213,2.35e-26,58;CL:0000215,2.35e-26,58;CL:1000413,1.84e-17,9;CL:0005020,4.00e-17,6;CL:0002138,4.00e-17,6;CL:0005022,4.00e-17,6;CL:0002544,6.48e-11,6;CL:0002144,2.55e-09,3;CL:0000222,8.36e-09,121;CL:0002618,1.03e-08,3;CL:0002188,1.60e-08,5;CL:0002543,2.95e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;8.88e-30;18!CL:0005022;3.84e-17;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.07e-78!115;UBERON:0004111!1.06e-30!241;UBERON:0000477!3.70e-28!286;UBERON:0001049!1.77e-27!57;UBERON:0005068!1.77e-27!57;UBERON:0006241!1.77e-27!57;UBERON:0007135!1.77e-27!57;UBERON:0000025!9.84e-25!194;UBERON:0003075!1.13e-21!86;UBERON:0007284!1.13e-21!86;UBERON:0002616!1.74e-21!59;UBERON:0001986!4.05e-21!18;UBERON:0004638!4.05e-21!18;UBERON:0004852!4.05e-21!18;UBERON:0002346!4.06e-20!90;UBERON:0003080!2.96e-19!42;UBERON:0001017!8.61e-19!82;UBERON:0005743!1.22e-18!86;UBERON:0002780!4.13e-18!41;UBERON:0001890!4.13e-18!41;UBERON:0006240!4.13e-18!41;UBERON:0000955!9.39e-18!69;UBERON:0006238!9.39e-18!69;UBERON:0000073!7.18e-17!94;UBERON:0001016!7.18e-17!94;UBERON:0000487!2.56e-16!22;UBERON:0002020!2.58e-16!34;UBERON:0003528!2.58e-16!34;UBERON:0001893!2.77e-16!34;UBERON:0002791!2.24e-15!33;UBERON:0000483!1.82e-14!309;UBERON:0001869!3.26e-14!32;UBERON:0000119!4.17e-14!312;UBERON:0006914!9.57e-14!25;UBERON:0000055!2.35e-13!69;UBERON:0000153!4.83e-12!129;UBERON:0007811!4.83e-12!129;UBERON:0003056!5.35e-12!61;UBERON:0002298!1.28e-11!8;UBERON:0002619!2.57e-11!22;UBERON:0003915!2.91e-11!9;UBERON:0004700!2.91e-11!9;UBERON:0001917!2.91e-11!9;UBERON:0000033!1.58e-10!123;UBERON:0002049!1.60e-10!79;UBERON:0007798!1.60e-10!79;UBERON:0002465!3.45e-10!10;UBERON:0000467!1.11e-09!625;UBERON:0000480!1.30e-09!626;UBERON:0000468!1.39e-09!659;UBERON:0000956!1.54e-09!25;UBERON:0000203!1.54e-09!25;UBERON:0003076!1.96e-09!15;UBERON:0003057!1.96e-09!15;UBERON:0001950!2.30e-09!20;UBERON:0002308!3.89e-09!9;UBERON:0000125!3.89e-09!9;UBERON:0001981!4.32e-09!60;UBERON:0007500!4.32e-09!60;UBERON:0004537!4.32e-09!60;UBERON:0006965!4.32e-09!60;UBERON:0004121!5.22e-09!169;UBERON:0001009!5.77e-09!113;UBERON:0004872!1.18e-08!84;UBERON:0000064!1.19e-08!219;UBERON:0000924!1.63e-08!173;UBERON:0006601!1.63e-08!173;UBERON:0001473!4.17e-08!8;UBERON:0004536!4.17e-08!8;UBERON:0006558!4.17e-08!8;UBERON:0004732!1.26e-07!13;UBERON:0004535!3.14e-07!110;UBERON:0002420!5.02e-07!9;UBERON:0007245!5.02e-07!9;UBERON:0010009!5.02e-07!9;UBERON:0010011!5.02e-07!9;UBERON:0000454!5.02e-07!9;UBERON:0009663!5.50e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;8.88e-30;18!UBERON:0001986;8.88e-30;18!UBERON:0004852;8.88e-30;18!UBERON:0000487;1.31e-23;22!UBERON:0006914;2.78e-20;25!UBERON:0003915;2.09e-17;9!UBERON:0004700;2.09e-17;9!UBERON:0001917;2.09e-17;9!UBERON:0000490;7.66e-13;33!UBERON:0001473;1.27e-12;8!UBERON:0004536;1.27e-12;8!UBERON:0006558;1.27e-12;8!UBERON:0000055;4.78e-10;65!UBERON:0002465;6.52e-10;10!UBERON:0002298;1.36e-09;6!UBERON:0010523;2.43e-09;3!UBERON:0001915;2.43e-09;3!UBERON:0001982;2.43e-09;3!UBERON:0004151;4.62e-09;3!UBERON:0007023;3.01e-08;114!UBERON:0003978;4.00e-08;3!UBERON:0000946;4.00e-08;3!UBERON:0001896;1.32e-07;3!UBERON:0005290;1.32e-07;3!UBERON:0007100;6.14e-07;25!UBERON:0002049;7.22e-07;75!UBERON:0007798;7.22e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,6.71e-30,18;UBERON:0001986,6.71e-30,18;UBERON:0004852,6.71e-30,18;UBERON:0007023,5.58e-29,114;UBERON:0000487,1.05e-23,22;UBERON:0006914,2.28e-20,25;UBERON:0004111,4.02e-20,240;UBERON:0000055,1.60e-19,68;UBERON:0000025,1.70e-17,192;UBERON:0003915,1.84e-17,9;UBERON:0004700,1.84e-17,9;UBERON:0001917,1.84e-17,9;UBERON:0002049,4.43e-16,78;UBERON:0007798,4.43e-16,78;UBERON:0001009,9.09e-16,112;UBERON:0004535,9.92e-13,109;UBERON:0001473,1.30e-12,8;UBERON:0004536,1.30e-12,8;UBERON:0006558,1.30e-12,8;UBERON:0007500,1.75e-12,59;UBERON:0001981,1.75e-12,59;UBERON:0004537,1.75e-12,59;UBERON:0006965,1.75e-12,59;UBERON:0004872,1.31e-10,83;UBERON:0000483,2.82e-10,306;UBERON:0000119,4.71e-10,309;UBERON:0002465,6.66e-10,10;UBERON:0003914,6.67e-10,117;UBERON:0002298,7.41e-10,6;UBERON:0010523,2.55e-09,3;UBERON:0001915,2.55e-09,3;UBERON:0001982,2.55e-09,3;UBERON:0004151,4.47e-09,3;UBERON:0003075,2.36e-08,82;UBERON:0007284,2.36e-08,82;UBERON:0003978,2.47e-08,3;UBERON:0009751,2.47e-08,3;UBERON:0000946,2.47e-08,3;UBERON:0002523,2.47e-08,3;UBERON:0005983,2.47e-08,3;UBERON:0002165,2.47e-08,3;UBERON:0002062,2.47e-08,3;UBERON:0007280,2.47e-08,3;UBERON:0001896,6.35e-08,3;UBERON:0005290,6.35e-08,3;UBERON:0010096,6.35e-08,3;UBERON:0001049,8.68e-08,56;UBERON:0005068,8.68e-08,56;UBERON:0006241,8.68e-08,56;UBERON:0007135,8.68e-08,56;UBERON:0002346,9.75e-08,86;UBERON:0004876,9.80e-08,11;UBERON:0005103,1.17e-07,8;UBERON:0000083,1.17e-07,8;UBERON:0009201,1.17e-07,8;UBERON:0006553,1.17e-07,8;UBERON:0003074,1.17e-07,8;UBERON:0003060,1.17e-07,8;UBERON:0010314,3.49e-07,132;UBERON:0000058,4.92e-07,19;UBERON:0003076,8.46e-07,15;UBERON:0003057,8.46e-07,15;UBERON:0000080,9.17e-07,9;UBERON:0002120,9.17e-07,9;UBERON:0004875,9.17e-07,9;UBERON:0005721,9.17e-07,9;UBERON:0005754,9.17e-07,9;UBERON:0007297,9.17e-07,9 | |||
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| ||
|short_description=p6@VWF | |||
}} | }} |
Latest revision as of 17:57, 19 September 2015
Short description: | p6@VWF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_VWF_5end |
Coexpression cluster: | C428_Endothelial_Renal_Lymphatic_Hepatic_adipose_heart_breast |
Association with transcript: | -109bp_to_ENST00000538635_5end |
EntrezGene: | VWF |
HGNC: | 12726 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 2.03e-47 | 36 |
endothelial cell of vascular tree | 5.27e-45 | 24 |
meso-epithelial cell | 2.71e-36 | 45 |
blood vessel endothelial cell | 6.71e-30 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.71e-30 | 18 |
lining cell | 2.35e-26 | 58 |
barrier cell | 2.35e-26 | 58 |
endothelial cell of artery | 1.84e-17 | 9 |
lymphangioblast | 4.00e-17 | 6 |
endothelial cell of lymphatic vessel | 4.00e-17 | 6 |
vascular lymphangioblast | 4.00e-17 | 6 |
aortic endothelial cell | 6.48e-11 | 6 |
capillary endothelial cell | 2.55e-09 | 3 |
mesodermal cell | 8.36e-09 | 121 |
endothelial cell of umbilical vein | 1.03e-08 | 3 |
glomerular endothelial cell | 1.60e-08 | 5 |
vein endothelial cell | 2.95e-07 | 6 |