FFCP PHASE1:Hg19::chr12:7863680..7863695,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=359787 | |EntrezGene=359787 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19199 | |HGNC=19199 | ||
|TSSclassifier=strong | |||
|UniProt=Q6W0C5 | |UniProt=Q6W0C5 | ||
|association_with_transcript=-354bp_to_ENST00000345088_5end | |||
|cluster_id=chr12:7863680..7863695,+ | |||
|coexpression_cluster_id=C128 | |||
|description=CAGE_peak_3_at_DPPA3_5end | |||
|id=chr12:7863680..7863695,+ | |||
|ontology_enrichment_celltype=CL:0000039!2.68e-78!7;CL:0000586!2.68e-78!7;CL:0002322!1.38e-34!5;CL:0000540!2.81e-08!6;CL:0000031!2.81e-08!6;CL:0000404!2.81e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0000039;1.99e-171;7!CL:0000586;1.99e-171;7!CL:0000083;2.04e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.99e-171,7;CL:0000586,1.99e-171,7;CL:0000083,2.04e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0009117;5.25e-40;10!UBERON:0005564;5.25e-40;10 | |||
|ontology_enrichment_disease=DOID:3095!6.01e-32!22;DOID:2994!6.01e-32!22;DOID:1799!1.57e-12!1;DOID:10165!1.57e-12!1;DOID:1798!1.57e-12!1 | |||
|ontology_enrichment_disease_v019=DOID:3095;7.16e-55;22!DOID:2994;7.16e-55;22!DOID:1799;1.26e-25;1!DOID:10165;1.26e-25;1!DOID:1798;1.26e-25;1!DOID:1793;2.04e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,7.16e-55,22;DOID:2994,7.16e-55,22;DOID:1799,1.26e-25,1;DOID:10165,1.26e-25,1;DOID:1798,1.26e-25,1;DOID:0050687,4.45e-11,143;DOID:1793,2.04e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0000473!5.36e-23!8;UBERON:0003135!8.24e-17!11;UBERON:0000991!6.56e-09!21;UBERON:0009196!6.56e-09!21;UBERON:0009117!6.56e-09!21;UBERON:0005564!6.56e-09!21;UBERON:0004176!1.64e-08!22;UBERON:0003101!1.64e-08!22;UBERON:0000079!1.64e-08!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;8.04e-50;8!UBERON:0003135;1.96e-36;11!UBERON:0000991;2.22e-19;21!UBERON:0003101;1.59e-18;22!UBERON:0000079;1.59e-18;22!UBERON:0002323;7.99e-13;45!UBERON:0002553;2.60e-08;52!UBERON:0004458;4.86e-08;48!UBERON:0003133;2.70e-07;44!UBERON:0000922;4.60e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,8.04e-50,8;UBERON:0003135,1.96e-36,11;UBERON:0000991,2.22e-19,21;UBERON:0009196,2.22e-19,21;UBERON:0009117,2.22e-19,21;UBERON:0005564,2.22e-19,21;UBERON:0004176,1.59e-18,22;UBERON:0003101,1.59e-18,22;UBERON:0000079,1.59e-18,22;UBERON:0002323,1.00e-13,46;UBERON:0004458,6.66e-13,49;UBERON:0003886,9.86e-12,54;UBERON:0002553,2.06e-10,61;UBERON:0003133,9.76e-09,48;UBERON:0005156,3.56e-07,59;UBERON:0000990,3.56e-07,59 | |||
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|short_description=p3@DPPA3 | |||
}} | }} |
Latest revision as of 23:00, 24 September 2015
Short description: | p3@DPPA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_DPPA3_5end |
Coexpression cluster: | C128_testicular_choriocarcinoma_H9_teratocarcinoma_pancreatic_iPS_HES3GFP |
Association with transcript: | -354bp_to_ENST00000345088_5end |
EntrezGene: | DPPA3 |
HGNC: | 19199 |
UniProt: | Q6W0C5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.99e-171 | 7 |
germ cell | 1.99e-171 | 7 |
epithelial cell of pancreas | 2.04e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
testis | 8.04e-50 | 8 |
male reproductive organ | 1.96e-36 | 11 |
gonad | 2.22e-19 | 21 |
indifferent external genitalia | 2.22e-19 | 21 |
indifferent gonad | 2.22e-19 | 21 |
gonad primordium | 2.22e-19 | 21 |
external genitalia | 1.59e-18 | 22 |
male organism | 1.59e-18 | 22 |
male reproductive system | 1.59e-18 | 22 |
body cavity | 1.00e-13 | 46 |
body cavity or lining | 6.66e-13 | 49 |
body cavity precursor | 9.86e-12 | 54 |
anatomical cavity | 2.06e-10 | 61 |
reproductive organ | 9.76e-09 | 48 |
reproductive structure | 3.56e-07 | 59 |
reproductive system | 3.56e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 7.16e-55 | 22 |
germ cell cancer | 7.16e-55 | 22 |
islet cell tumor | 1.26e-25 | 1 |
endocrine pancreas cancer | 1.26e-25 | 1 |
pancreatic endocrine carcinoma | 1.26e-25 | 1 |
cell type cancer | 4.45e-11 | 143 |
pancreatic cancer | 2.04e-07 | 4 |