FFCP PHASE1:Hg19::chr14:104029557..104029577,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:104029557..104029577,+ to FFCP PHASE1:Hg19::chr14:104029557..104029577,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84334 | |EntrezGene=84334 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20492 | |HGNC=20492 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=30bp_to_ENST00000473127_5end | |||
|cluster_id=chr14:104029557..104029577,+ | |||
|description=CAGE_peak_4_at_APOPT1_5end | |||
|id=chr14:104029557..104029577,+ | |||
|ontology_enrichment_celltype=CL:0000066!4.63e-38!254;CL:0000220!3.31e-24!246;CL:0002321!6.76e-24!248;CL:0002076!6.64e-13!43;CL:0000222!1.28e-12!119;CL:0000223!3.09e-12!59;CL:0000548!4.25e-12!679;CL:0000004!4.25e-12!679;CL:0000255!4.25e-12!679;CL:0000012!2.67e-11!682;CL:0000076!6.81e-10!62 | |||
|ontology_enrichment_celltype_v019=CL:0002076;3.77e-10;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.38e-37,253;CL:0002321,1.55e-22,250;CL:0000222,1.28e-12,121;CL:0002076,2.19e-12,42;CL:0000223,1.05e-11,58;CL:0000076,7.26e-10,63 | |||
|ontology_enrichment_development_v019=CL:0000223;2.73e-07;58 | |||
|ontology_enrichment_disease=DOID:305!2.73e-09!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.91e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0002100!2.03e-12!216;UBERON:0003104!2.85e-12!238;UBERON:0009142!2.85e-12!238;UBERON:0000464!7.13e-11!104;UBERON:0000466!8.56e-11!126;UBERON:0000481!3.07e-10!347;UBERON:0004119!3.65e-10!169;UBERON:0000925!3.65e-10!169;UBERON:0006595!3.65e-10!169;UBERON:0000468!4.51e-10!659;UBERON:0009569!8.12e-10!113;UBERON:0001004!9.73e-10!72;UBERON:0000483!1.77e-09!309;UBERON:0000915!1.93e-09!52;UBERON:0003914!2.34e-09!118;UBERON:0000119!2.66e-09!312;UBERON:0000475!2.91e-09!365;UBERON:0000490!9.23e-09!138;UBERON:0004921!3.16e-08!129;UBERON:0004185!3.16e-08!129;UBERON:0004111!4.38e-08!241;UBERON:0001007!5.31e-08!155;UBERON:0001555!5.31e-08!155;UBERON:0007026!5.31e-08!155;UBERON:0000480!8.84e-08!626;UBERON:0000055!1.21e-07!69;UBERON:0000467!1.21e-07!625;UBERON:0001637!1.63e-07!42;UBERON:0003509!1.63e-07!42;UBERON:0004572!1.63e-07!42;UBERON:0001981!3.44e-07!60;UBERON:0007500!3.44e-07!60;UBERON:0004537!3.44e-07!60;UBERON:0006965!3.44e-07!60;UBERON:0005256!3.88e-07!143;UBERON:0002050!5.49e-07!605;UBERON:0005423!5.49e-07!605;UBERON:0000922!6.00e-07!612;UBERON:0000923!6.29e-07!604;UBERON:0005291!6.29e-07!604;UBERON:0006598!6.29e-07!604;UBERON:0002532!6.29e-07!604;UBERON:0008947!6.61e-07!38;UBERON:0003258!6.61e-07!38;UBERON:0000486!7.77e-07!82;UBERON:0001041!9.20e-07!98 | |||
|ontology_enrichment_uberon_v019=UBERON:0005911;6.36e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,8.68e-12,199;UBERON:0001004,8.76e-10,74;UBERON:0004119,1.47e-09,160;UBERON:0000925,1.47e-09,160;UBERON:0006595,1.47e-09,160;UBERON:0003914,8.14e-09,117;UBERON:0009569,1.01e-08,112;UBERON:0000915,1.14e-08,52;UBERON:0000483,1.54e-08,306;UBERON:0000119,3.29e-08,309;UBERON:0000490,3.51e-08,148;UBERON:0004921,1.84e-07,118;UBERON:0000055,2.68e-07,68;UBERON:0001007,3.19e-07,145;UBERON:0001555,3.19e-07,145;UBERON:0007026,3.19e-07,145;UBERON:0001637,4.60e-07,42;UBERON:0003509,4.60e-07,42;UBERON:0004572,4.60e-07,42;UBERON:0004111,5.83e-07,240;UBERON:0000486,6.34e-07,83 | |||
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| ||
|short_description=p4@APOPT1 | |||
}} | }} |
Latest revision as of 16:10, 18 September 2015
Short description: | p4@APOPT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_APOPT1_5end |
Coexpression cluster: | NA |
Association with transcript: | 30bp_to_ENST00000473127_5end |
EntrezGene: | APOPT1 |
HGNC: | 20492 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.38e-37 | 253 |
embryonic cell | 1.55e-22 | 250 |
mesodermal cell | 1.28e-12 | 121 |
endo-epithelial cell | 2.19e-12 | 42 |
endodermal cell | 1.05e-11 | 58 |
squamous epithelial cell | 7.26e-10 | 63 |
Ontology term | p-value | n |
---|---|---|
trunk | 8.68e-12 | 199 |
respiratory system | 8.76e-10 | 74 |
endoderm-derived structure | 1.47e-09 | 160 |
endoderm | 1.47e-09 | 160 |
presumptive endoderm | 1.47e-09 | 160 |
epithelial tube | 8.14e-09 | 117 |
subdivision of trunk | 1.01e-08 | 112 |
thoracic segment of trunk | 1.14e-08 | 52 |
epithelium | 1.54e-08 | 306 |
cell layer | 3.29e-08 | 309 |
unilaminar epithelium | 3.51e-08 | 148 |
subdivision of digestive tract | 1.84e-07 | 118 |
vessel | 2.68e-07 | 68 |
digestive system | 3.19e-07 | 145 |
digestive tract | 3.19e-07 | 145 |
primitive gut | 3.19e-07 | 145 |
artery | 4.60e-07 | 42 |
arterial blood vessel | 4.60e-07 | 42 |
arterial system | 4.60e-07 | 42 |
anatomical conduit | 5.83e-07 | 240 |
multilaminar epithelium | 6.34e-07 | 83 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.91e-08 | 106 |