FFCP PHASE1:Hg19::chr15:81293316..81293399,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr15:81293316..81293399,+ to FFCP PHASE1:Hg19::chr15:81293316..81293399,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=59274 | |EntrezGene=59274 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13519 | |HGNC=13519 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H1K6 | |UniProt=Q9H1K6 | ||
|association_with_transcript=21bp_to_ENST00000267984,NM_022566,uc002bfz.2_5end | |||
|cluster_id=chr15:81293316..81293399,+ | |||
|description=CAGE_peak_2_at_MESDC1_5end | |||
|id=chr15:81293316..81293399,+ | |||
|ontology_enrichment_celltype=CL:0002057!9.65e-15!42;CL:0000860!2.94e-14!45;CL:0002194!3.05e-14!63;CL:0000576!3.05e-14!63;CL:0000040!3.05e-14!63;CL:0000559!3.05e-14!63;CL:0002009!1.45e-13!65;CL:0000557!6.63e-13!71;CL:0000839!1.52e-11!70;CL:0000766!3.44e-11!76;CL:0002078!4.06e-10!44;CL:0000115!5.64e-10!35;CL:0002371!2.51e-09!591;CL:0000763!7.65e-09!112;CL:0000049!7.65e-09!112;CL:0000222!8.80e-09!119;CL:1000449!3.20e-08!16;CL:0000071!4.55e-08!18;CL:0002546!4.55e-08!18;CL:0000213!5.55e-08!57;CL:0000215!5.55e-08!57;CL:0002139!1.16e-07!24;CL:1000497!2.57e-07!18;CL:0002518!2.57e-07!18;CL:0000220!5.78e-07!246;CL:0000144!7.27e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.51e-17;33!CL:0002057;1.51e-17;33!CL:0000473;3.02e-16;39!CL:0000234;3.02e-16;39!CL:1000449;2.54e-09;15!CL:0000115;6.31e-09;36!CL:0000576;1.24e-08;48!CL:1000497;3.19e-08;17!CL:0002518;3.19e-08;17!CL:0000071;4.65e-08;18!CL:0002681;9.05e-08;12!CL:0002584;9.05e-08;12!CL:0002139;1.32e-07;24!CL:0002078;3.55e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.29e-16,48;CL:0000234,1.29e-16,48;CL:0002194,8.95e-15,59;CL:0000576,8.95e-15,59;CL:0000040,8.95e-15,59;CL:0000559,8.95e-15,59;CL:0000860,9.60e-15,42;CL:0002057,9.60e-15,42;CL:0002009,4.86e-14,61;CL:0000557,2.96e-13,67;CL:0000839,7.13e-12,66;CL:0000766,1.82e-11,72;CL:0002078,1.68e-10,45;CL:0000115,2.27e-10,36;CL:1000449,3.81e-09,15;CL:0000763,6.00e-09,108;CL:0000049,6.00e-09,108;CL:0000222,8.29e-09,121;CL:0000213,2.74e-08,58;CL:0000215,2.74e-08,58;CL:1000497,4.46e-08,17;CL:0002518,4.46e-08,17;CL:0000071,4.53e-08,18;CL:0002546,4.53e-08,18;CL:0002139,1.16e-07,24;CL:0002681,1.22e-07,12;CL:0002584,1.22e-07,12 | |||
|ontology_enrichment_development_v019=CL:0002057;1.08e-11;42!CL:0002546;4.65e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!5.25e-15!216;UBERON:0002371!1.54e-11!80;UBERON:0001474!3.73e-11!86;UBERON:0004765!7.41e-09!101;UBERON:0001434!7.41e-09!101;UBERON:0002405!9.37e-09!115;UBERON:0002204!2.10e-08!167;UBERON:0004211!3.20e-08!16;UBERON:0001285!3.20e-08!16;UBERON:0007684!3.20e-08!16;UBERON:0003220!3.20e-08!16;UBERON:0004208!3.20e-08!16;UBERON:0001986!4.55e-08!18;UBERON:0004638!4.55e-08!18;UBERON:0004852!4.55e-08!18;UBERON:0000119!6.23e-08!312;UBERON:0006555!7.78e-08!17;UBERON:0005103!7.78e-08!17;UBERON:0000083!7.78e-08!17;UBERON:0009201!7.78e-08!17;UBERON:0004819!7.78e-08!17;UBERON:0006553!7.78e-08!17;UBERON:0003074!7.78e-08!17;UBERON:0003060!7.78e-08!17;UBERON:0000080!8.35e-08!18;UBERON:0002120!8.35e-08!18;UBERON:0004875!8.35e-08!18;UBERON:0005721!8.35e-08!18;UBERON:0005754!8.35e-08!18;UBERON:0007297!8.35e-08!18;UBERON:0003887!8.90e-08!21;UBERON:0000483!1.24e-07!309;UBERON:0000923!1.59e-07!604;UBERON:0005291!1.59e-07!604;UBERON:0006598!1.59e-07!604;UBERON:0002532!1.59e-07!604;UBERON:0000467!1.92e-07!625;UBERON:0002193!1.94e-07!112;UBERON:0003914!2.31e-07!118;UBERON:0002050!2.52e-07!605;UBERON:0005423!2.52e-07!605;UBERON:0000480!2.58e-07!626;UBERON:0002390!2.60e-07!102;UBERON:0003061!2.60e-07!102;UBERON:0000025!4.20e-07!194;UBERON:0000922!5.92e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;2.54e-09;15!UBERON:0004819;2.54e-09;15!UBERON:0001285;2.54e-09;15!UBERON:0007684;2.54e-09;15!UBERON:0004638;4.65e-08;18!UBERON:0001986;4.65e-08;18!UBERON:0004852;4.65e-08;18!UBERON:0001225;9.05e-08;12!UBERON:0008987;9.05e-08;12!UBERON:0000353;1.26e-07;15!UBERON:0001851;2.73e-07;15!UBERON:0006554;5.26e-07;30!UBERON:0001008;5.26e-07;30 | |||
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| ||
|short_description=p2@MESDC1 | |||
}} | }} |
Latest revision as of 10:13, 19 September 2015
Short description: | p2@MESDC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MESDC1_5end |
Coexpression cluster: | NA |
Association with transcript: | 21bp_to_ENST00000267984, NM_022566, uc002bfz.2_5end |
EntrezGene: | MESDC1 |
HGNC: | 13519 |
UniProt: | Q9H1K6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.29e-16 | 48 |
phagocyte | 1.29e-16 | 48 |
monopoietic cell | 8.95e-15 | 59 |
monocyte | 8.95e-15 | 59 |
monoblast | 8.95e-15 | 59 |
promonocyte | 8.95e-15 | 59 |
classical monocyte | 9.60e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.60e-15 | 42 |
macrophage dendritic cell progenitor | 4.86e-14 | 61 |
granulocyte monocyte progenitor cell | 2.96e-13 | 67 |
myeloid lineage restricted progenitor cell | 7.13e-12 | 66 |
myeloid leukocyte | 1.82e-11 | 72 |
meso-epithelial cell | 1.68e-10 | 45 |
endothelial cell | 2.27e-10 | 36 |
epithelial cell of nephron | 3.81e-09 | 15 |
myeloid cell | 6.00e-09 | 108 |
common myeloid progenitor | 6.00e-09 | 108 |
mesodermal cell | 8.29e-09 | 121 |
lining cell | 2.74e-08 | 58 |
barrier cell | 2.74e-08 | 58 |
kidney cell | 4.46e-08 | 17 |
kidney epithelial cell | 4.46e-08 | 17 |
blood vessel endothelial cell | 4.53e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.53e-08 | 18 |
endothelial cell of vascular tree | 1.16e-07 | 24 |
kidney cortical cell | 1.22e-07 | 12 |
renal cortical epithelial cell | 1.22e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 1.27e-12 | 203 |
bone marrow | 8.89e-12 | 76 |
bone element | 2.37e-11 | 82 |
immune system | 5.27e-11 | 93 |
skeletal element | 2.39e-09 | 90 |
nephron epithelium | 3.81e-09 | 15 |
renal tubule | 3.81e-09 | 15 |
nephron tubule | 3.81e-09 | 15 |
nephron | 3.81e-09 | 15 |
uriniferous tubule | 3.81e-09 | 15 |
nephrogenic mesenchyme | 3.81e-09 | 15 |
excretory tube | 1.11e-08 | 16 |
kidney epithelium | 1.11e-08 | 16 |
developing anatomical structure | 3.00e-08 | 581 |
blood vessel endothelium | 4.53e-08 | 18 |
endothelium | 4.53e-08 | 18 |
cardiovascular system endothelium | 4.53e-08 | 18 |
skeletal system | 7.68e-08 | 100 |
embryo | 8.19e-08 | 592 |
cortex of kidney | 1.22e-07 | 12 |
renal parenchyma | 1.22e-07 | 12 |
epithelial tube | 1.41e-07 | 117 |
hemolymphoid system | 1.67e-07 | 108 |
parenchyma | 1.78e-07 | 15 |
cell layer | 1.87e-07 | 309 |
musculoskeletal system | 2.08e-07 | 167 |
tube | 2.14e-07 | 192 |
hematopoietic system | 2.17e-07 | 98 |
blood island | 2.17e-07 | 98 |
epithelium | 3.64e-07 | 306 |
cortex | 3.95e-07 | 15 |
mesoderm | 5.21e-07 | 315 |
mesoderm-derived structure | 5.21e-07 | 315 |
presumptive mesoderm | 5.21e-07 | 315 |