FFCP PHASE1:Hg19::chr16:67360631..67360650,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr16:67360631..67360650,- to FFCP PHASE1:Hg19::chr16:67360631..67360650,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=146212 | |EntrezGene=146212 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24753 | |HGNC=24753 | ||
|TSSclassifier=strong | |||
|UniProt=Q17RG1 | |UniProt=Q17RG1 | ||
|association_with_transcript=10bp_to_ENST00000304372,NM_001100915,uc002est.2,uc002esu.2,uc010vjj.1_5end | |||
|cluster_id=chr16:67360631..67360650,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_1_at_KCTD19_5end | |||
|id=chr16:67360631..67360650,- | |||
|ontology_enrichment_celltype=CL:1000497!2.62e-09!18;CL:0002518!2.62e-09!18;CL:1000507!6.72e-08!12;CL:1000494!6.72e-08!12;CL:1000449!6.85e-08!16;CL:0002681!3.64e-07!13;CL:0002584!3.64e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0000784;4.50e-13;3!CL:0002681;7.59e-11;12!CL:0002584;7.59e-11;12!CL:1000507;2.63e-09;10!CL:1000494;2.63e-09;10!CL:0000650;1.44e-08;2!CL:1000500;1.44e-08;2!CL:1000618;1.44e-08;2!CL:1001318;1.44e-08;2!CL:0002173;1.44e-08;2!CL:1000449;1.49e-08;15!CL:1000497;1.79e-07;17!CL:0002518;1.79e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,2.63e-13,3;CL:0002681,6.73e-11,12;CL:0002584,6.73e-11,12;CL:1000507,2.67e-09,10;CL:1000494,2.67e-09,10;CL:1000449,1.35e-08,15;CL:0000650,2.77e-08,2;CL:1000500,2.77e-08,2;CL:1000618,2.77e-08,2;CL:1001318,2.77e-08,2;CL:0002173,2.77e-08,2;CL:1000497,1.64e-07,17;CL:0002518,1.64e-07,17 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3119;5.27e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,6.23e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0002113!4.51e-11!27;UBERON:0003918!4.51e-11!27;UBERON:0005095!4.51e-11!27;UBERON:0007687!4.51e-11!27;UBERON:0005172!1.27e-08!55;UBERON:0005173!1.27e-08!55;UBERON:0006555!1.88e-08!17;UBERON:0005103!1.88e-08!17;UBERON:0000083!1.88e-08!17;UBERON:0009201!1.88e-08!17;UBERON:0004819!1.88e-08!17;UBERON:0006553!1.88e-08!17;UBERON:0003074!1.88e-08!17;UBERON:0003060!1.88e-08!17;UBERON:0000489!2.63e-08!32;UBERON:0001851!3.65e-08!16;UBERON:0003887!4.79e-08!21;UBERON:0009773!6.72e-08!12;UBERON:0001231!6.72e-08!12;UBERON:0004810!6.72e-08!12;UBERON:0004211!6.85e-08!16;UBERON:0001285!6.85e-08!16;UBERON:0007684!6.85e-08!16;UBERON:0003220!6.85e-08!16;UBERON:0004208!6.85e-08!16;UBERON:0000080!9.47e-08!18;UBERON:0002120!9.47e-08!18;UBERON:0004875!9.47e-08!18;UBERON:0005721!9.47e-08!18;UBERON:0005754!9.47e-08!18;UBERON:0007297!9.47e-08!18;UBERON:0001225!3.64e-07!13;UBERON:0008987!3.64e-07!13;UBERON:0006554!6.27e-07!44;UBERON:0002417!6.47e-07!61;UBERON:0000916!6.47e-07!61;UBERON:0005177!6.81e-07!107 | |||
|ontology_enrichment_uberon_v019=UBERON:0001851;3.93e-15;15!UBERON:0001225;7.59e-11;12!UBERON:0008987;7.59e-11;12!UBERON:0004211;2.63e-09;10!UBERON:0009773;2.63e-09;10!UBERON:0001231;2.63e-09;10!UBERON:0004810;2.63e-09;10!UBERON:0002113;7.26e-09;24!UBERON:0011143;7.26e-09;24!UBERON:0003567;1.44e-08;2!UBERON:0003838;1.44e-08;2!UBERON:0003586;1.44e-08;2!UBERON:0005169;1.44e-08;2!UBERON:0002321;1.44e-08;2!UBERON:0005215;1.44e-08;2!UBERON:0002303;1.44e-08;2!UBERON:0002319;1.44e-08;2!UBERON:0006555;1.49e-08;15!UBERON:0000353;1.49e-08;15!UBERON:0004819;1.49e-08;15!UBERON:0001285;1.49e-08;15!UBERON:0007684;1.49e-08;15!UBERON:0000489;4.00e-07;29!UBERON:0006554;7.58e-07;30!UBERON:0001008;7.58e-07;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001851,3.89e-15,15;UBERON:0001225,6.73e-11,12;UBERON:0008987,6.73e-11,12;UBERON:0004810,2.67e-09,10;UBERON:0004211,1.35e-08,15;UBERON:0009773,1.35e-08,15;UBERON:0000353,1.35e-08,15;UBERON:0001231,1.35e-08,15;UBERON:0001285,1.35e-08,15;UBERON:0007684,1.35e-08,15;UBERON:0004208,1.35e-08,15;UBERON:0003567,2.77e-08,2;UBERON:0003838,2.77e-08,2;UBERON:0003586,2.77e-08,2;UBERON:0005169,2.77e-08,2;UBERON:0002321,2.77e-08,2;UBERON:0005215,2.77e-08,2;UBERON:0002303,2.77e-08,2;UBERON:0002319,2.77e-08,2;UBERON:0002113,4.56e-08,26;UBERON:0003918,4.56e-08,26;UBERON:0011143,4.56e-08,26;UBERON:0005095,4.56e-08,26;UBERON:0007687,4.56e-08,26;UBERON:0006555,5.10e-08,16;UBERON:0004819,5.10e-08,16 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0.697801167972428,0,0,0,0,0,0,0,0,0.738726348460727,0.204000691244253,0,0.286235987131057,0,0.125542639594803,0.534893840235659,0.410502947249729,0.393553906568396,0,0,0.154816123316076,0,0,0,0.387336002901508,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0.221729397462564,0.175669571386252,18.3370705696798,0,0.370784442784429,0,0,0,5.72377498332821,1.71598473234038,5.94332002127304,0.198762407366705,0,0.347140501607594,0,0.419499436209906,0.275118041940067,0,0,1.06729878806013,0.33472061276467,0,0.760272105718513,0,0,0,0.803697554556718,0.673588117878509,0.788280363383256,0,0,0.183201743930407,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0.117434498643765,0,0,0,0.245668634623536,0.103325781175765,0,0,0,0,0,0.250237039743928,0.277064115484183,0.438977620880838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.323292113637624,0,0,0,0,0,0,0.731842236777572,0.132529768321485,1.16193942869518,0.829288440122964,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0,0,0,0,0,0.325808305310325,0,0,0.231860809950154,0,0.433099343283221,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0.492663237895943,0.880484340132261,0.621984346622316,0.432359860250884,0.50496973370552,0,0,0,0,0,0,0,0.224262168690721,0,0.07333828582095,0,0,0,0,0,0,0,0,0.142977993658148,0,0.823240336780769,0,0.355391948742546,0.791951872933429,0,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0.335032530668698,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,1.35359883872224,1.5403067420883,0.784349769176855,0,0.73886140225013,0,0.510281115829547,0,1.54227252690289,1.35473218771926,1.00337954770971,0.764628819135115,1.66215201785745,0.447749509444357,0,0,1.28225062558195,0,0,0.103041011647722,0.183138929636687,0.165018999841176,0,0,0,0,0,0,0.275673144969061,0,0.145016693914229,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0.48763373908959,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0.860468113224309,0,0,0,0,0.329294892959902,0,1.04980416073495,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,1.1750647824022,0,0,0.371606350251437,0,1.70740424036194,1.91311527274587,0,0,0,0,0,0,0,0,0,0,0,0,0.687010689511529,0,0,0,0,0,0,0,0,1.4098700508785,0,0,2.06312886974173,1.11443384277478,0,0,0,0,0,0.140669416410513,0,0,2.32237948940793,0,0,2.01546198283421,0.715880777515084,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.10269035917318,0.874813840149763,2.77799991893268,0.885741385813839,0.361789315876224,0,0.110579259931225,0,0,0,0,0,0,1.38338342632836,0.0897576444097721,1.4124158349861,0,0,0,2.04386596391473,0,0,0.451191321234361,0.19606253431774,0.167821586975843,0,0,0,0,0,1.08194319871046,0,0,0,0,0.247127877893006,0.104421949505455,0,1.60515529459758,0.234264445725339,0.182454789215666,0,0,0,0,0.30607276163049,0.126373159256976,1.35291077473043,0.933193722575224,0,1.65495977937749,0.313932918407225,1.19472429772959,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0.0882561266915003,0,0,0.19871461170299,0.0633107959558787,0,0.0801588202515337,0,0.19980960958213,0,1.37443915399099,3.60349495510126,0,0.99402028452346,0,0,0.104602846312333,0,0,0.600420288709789,0,0,0,0.262887354279314,0,0,0,0,0,0,0.0671834724867263,0,0,0.0787831823072236,0.0824158583811665,0,0,2.28617996577618,0,0,0.160753148465019,0.550157746388935,0,0,0,0.0607495566580247,0,0.0788057072991982,0.472091293214983,0.211200673038813,0,1.15149118391667,0,0,0,0,0,0,0,0,0,0.906496732161005,0,0,0,0.13223260174269,0.684347351537318,0,0,0.471612915298998,0,0,0.790446527591777,0.121792598380896,0,0,0.2506898940227,0,0,0.471162288750703,0,0.122026264901963,0,0,0,0.124192805882767,1.38348634936231,0,0,0.285465333544967,0,2.81000943484129,0.869526171664951,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34833881285112,0,0.260994291965212,0,0.463044948647668,0.244736704506468,0.179088841081487,0,0,0.883445729729405,0,0.168942440653073,0,0,0,0,0.389720617678777,0.265729680626726,0.981392365535065,0,0.737318726261158,0,0,0,0,0,0,0,0,0.255788742607303,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0,0,0,0.0691572524642179,0,0,0,0.235939446695481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0,0,0,0.336283722218824,0,0,0.0887023701626388,0.460935950223117,0,0,0,1.77290761325952,0,0,0.471346769748006,0,0,0.863710364874486,0.47775168788705,0.428859265059938,1.89616334079272,2.20858708199438,0,0,0,0,0,0,0,0.170426809518315,0,0.22910686854405,0,0,0.223710863595585,0,0,0,0,0,0,1.40363678077263,2.18845852677505,0.713520544665411,0,0.769583617218004,2.71733118420012,0,0.218559560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| ||
|short_description=p1@KCTD19 | |||
}} | }} |
Latest revision as of 10:31, 17 September 2015
Short description: | p1@KCTD19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KCTD19_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 10bp_to_ENST00000304372, NM_001100915, uc002est.2, uc002esu.2, uc010vjj.1_5end |
EntrezGene: | KCTD19 |
HGNC: | 24753 |
UniProt: | Q17RG1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 2.63e-13 | 3 |
kidney cortical cell | 6.73e-11 | 12 |
renal cortical epithelial cell | 6.73e-11 | 12 |
kidney tubule cell | 2.67e-09 | 10 |
nephron tubule epithelial cell | 2.67e-09 | 10 |
epithelial cell of nephron | 1.35e-08 | 15 |
mesangial cell | 2.77e-08 | 2 |
kidney interstitial cell | 2.77e-08 | 2 |
juxtaglomerular complex cell | 2.77e-08 | 2 |
renal interstitial pericyte | 2.77e-08 | 2 |
extraglomerular mesangial cell | 2.77e-08 | 2 |
kidney cell | 1.64e-07 | 17 |
kidney epithelial cell | 1.64e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
cortex | 3.89e-15 | 15 |
cortex of kidney | 6.73e-11 | 12 |
renal parenchyma | 6.73e-11 | 12 |
nephron tubule epithelium | 2.67e-09 | 10 |
nephron epithelium | 1.35e-08 | 15 |
renal tubule | 1.35e-08 | 15 |
parenchyma | 1.35e-08 | 15 |
nephron tubule | 1.35e-08 | 15 |
nephron | 1.35e-08 | 15 |
uriniferous tubule | 1.35e-08 | 15 |
nephrogenic mesenchyme | 1.35e-08 | 15 |
abdomen connective tissue | 2.77e-08 | 2 |
abdominal segment connective tissue | 2.77e-08 | 2 |
trunk connective tissue | 2.77e-08 | 2 |
interstitial tissue | 2.77e-08 | 2 |
extraglomerular mesangium | 2.77e-08 | 2 |
kidney interstitium | 2.77e-08 | 2 |
juxtaglomerular apparatus | 2.77e-08 | 2 |
mesangium | 2.77e-08 | 2 |
kidney | 4.56e-08 | 26 |
kidney mesenchyme | 4.56e-08 | 26 |
upper urinary tract | 4.56e-08 | 26 |
kidney rudiment | 4.56e-08 | 26 |
kidney field | 4.56e-08 | 26 |
excretory tube | 5.10e-08 | 16 |
kidney epithelium | 5.10e-08 | 16 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 6.23e-07 | 14 |