FFCP PHASE1:Hg19::chr16:82068905..82068918,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr16:82068905..82068918,+ to FFCP PHASE1:Hg19::chr16:82068905..82068918,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3294 | |EntrezGene=3294 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5211 | |HGNC=5211 | ||
|TSSclassifier=strong | |||
|UniProt=P37059 | |UniProt=P37059 | ||
|association_with_transcript=39bp_to_ENST00000199936_5end | |||
|cluster_id=chr16:82068905..82068918,+ | |||
|coexpression_cluster_id=C1223 | |||
|description=CAGE_peak_7_at_HSD17B2_5end | |||
|id=chr16:82068905..82068918,+ | |||
|ontology_enrichment_celltype=CL:0005020!7.31e-12!6;CL:0002138!7.31e-12!6;CL:0005022!7.31e-12!6;CL:0000066!4.66e-11!254;CL:0000223!1.80e-08!59;CL:0002139!1.92e-07!24;CL:0002586!3.01e-07!3;CL:0000197!6.10e-07!6;CL:0000098!6.10e-07!6;CL:0002167!6.10e-07!6;CL:0000181!6.36e-07!12;CL:0000417!6.36e-07!12;CL:0000668!6.36e-07!12;CL:0000414!6.36e-07!12;CL:0000412!6.36e-07!12;CL:0000182!6.36e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002586;2.56e-21;3!CL:0000149;3.90e-16;4!CL:0000306;3.54e-15;4!CL:0002222;3.54e-15;4!CL:0002224;3.54e-15;4!CL:0002138;4.85e-11;6!CL:0000064;1.34e-09;3!CL:0000067;1.34e-09;3!CL:0005012;1.34e-09;3!CL:0002304;1.34e-09;3!CL:0000342;4.10e-08;1!CL:0002565;4.10e-08;1!CL:0000147;5.07e-08;14!CL:0002139;5.94e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,2.57e-21,3;CL:0000149,3.90e-16,4;CL:0000306,2.64e-15,4;CL:0002222,2.64e-15,4;CL:0002224,2.64e-15,4;CL:0005020,4.46e-11,6;CL:0002138,4.46e-11,6;CL:0005022,4.46e-11,6;CL:0000064,1.17e-09,3;CL:0000067,1.17e-09,3;CL:0005012,1.17e-09,3;CL:0002304,1.17e-09,3;CL:0000342,5.05e-08,1;CL:0002565,5.05e-08,1;CL:0000147,5.36e-08,14;CL:0002139,6.02e-07,24 | |||
|ontology_enrichment_development_v019=CL:0005022;4.85e-11;6!UBERON:0003124;1.65e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007625!3.22e-17!11;UBERON:0000019!1.28e-12!19;UBERON:0000047!1.28e-12!19;UBERON:0004088!1.28e-12!19;UBERON:0003072!1.28e-12!19;UBERON:0003071!1.28e-12!19;UBERON:0004128!1.28e-12!19;UBERON:0000970!7.97e-12!20;UBERON:0002104!4.17e-11!21;UBERON:0001456!4.17e-11!21;UBERON:0000020!7.33e-10!23;UBERON:0000160!1.27e-09!27;UBERON:0001032!2.56e-09!24;UBERON:0004456!2.56e-09!24;UBERON:0004119!4.66e-09!169;UBERON:0000925!4.66e-09!169;UBERON:0006595!4.66e-09!169;UBERON:0005409!6.10e-09!35;UBERON:0004921!6.16e-09!129;UBERON:0004185!6.16e-09!129;UBERON:0001473!1.22e-08!8;UBERON:0004536!1.22e-08!8;UBERON:0006558!1.22e-08!8;UBERON:0003929!1.69e-08!54;UBERON:0000488!2.22e-08!4;UBERON:0005085!2.50e-08!29;UBERON:0001007!3.24e-08!155;UBERON:0001555!3.24e-08!155;UBERON:0007026!3.24e-08!155;UBERON:0001801!8.47e-08!14;UBERON:0001781!3.01e-07!3;UBERON:0001782!3.01e-07!3;UBERON:0005424!3.01e-07!3;UBERON:0001444!4.23e-07!48;UBERON:0001155!5.06e-07!9;UBERON:0000966!6.84e-07!5;UBERON:0005388!6.84e-07!5;UBERON:0001802!6.84e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0007625;2.58e-47;11!UBERON:0000019;7.77e-27;19!UBERON:0000047;7.77e-27;19!UBERON:0004088;7.77e-27;19!UBERON:0010230;7.77e-27;19!UBERON:0000970;2.00e-25;20!UBERON:0002104;3.77e-24;21!UBERON:0001456;3.77e-24;21!UBERON:0000020;6.24e-22;23!UBERON:0001781;2.56e-21;3!UBERON:0001782;2.56e-21;3!UBERON:0001032;5.84e-21;24!UBERON:0004456;5.84e-21;24!UBERON:0001801;2.72e-16;14!UBERON:0000488;2.16e-15;4!UBERON:0010077;3.54e-15;4!UBERON:0005389;3.54e-15;4!UBERON:0000484;3.54e-15;4!UBERON:0000965;3.54e-15;4!UBERON:0001803;3.54e-15;4!UBERON:0010371;4.20e-15;31!UBERON:0000966;5.13e-13;5!UBERON:0005388;5.13e-13;5!UBERON:0001802;5.13e-13;5!UBERON:0002203;1.93e-10;6!UBERON:0001768;1.93e-10;6!UBERON:0002200;1.93e-10;6!UBERON:0001778;1.34e-09;3!UBERON:0001775;1.34e-09;3!UBERON:0001473;2.15e-08;8!UBERON:0004536;2.15e-08;8!UBERON:0006558;2.15e-08;8!UBERON:0002506;4.10e-08;1!UBERON:0001769;4.10e-08;1!UBERON:0001444;5.45e-07;48!UBERON:0002465;8.48e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,1.87e-47,11;UBERON:0000019,1.68e-25,20;UBERON:0000047,1.68e-25,20;UBERON:0010312,1.68e-25,20;UBERON:0004088,1.68e-25,20;UBERON:0010230,1.68e-25,20;UBERON:0003072,1.68e-25,20;UBERON:0004128,1.68e-25,20;UBERON:0003071,1.68e-25,20;UBERON:0000970,3.19e-24,21;UBERON:0002104,3.19e-24,21;UBERON:0001456,4.65e-23,22;UBERON:0001782,2.57e-21,3;UBERON:0005424,2.57e-21,3;UBERON:0000020,5.06e-21,24;UBERON:0001032,5.06e-21,24;UBERON:0004456,5.06e-21,24;UBERON:0001801,2.31e-16,14;UBERON:0001781,3.90e-16,4;UBERON:0005085,5.83e-16,31;UBERON:0000488,2.16e-15,4;UBERON:0010077,2.64e-15,4;UBERON:0005389,2.64e-15,4;UBERON:0000484,2.64e-15,4;UBERON:0002546,2.64e-15,4;UBERON:0000965,2.64e-15,4;UBERON:0001803,2.64e-15,4;UBERON:0003073,2.64e-15,4;UBERON:0005426,2.64e-15,4;UBERON:0000966,6.25e-11,6;UBERON:0005388,6.25e-11,6;UBERON:0001802,6.25e-11,6;UBERON:0002203,1.93e-10,6;UBERON:0001768,1.93e-10,6;UBERON:0002200,1.93e-10,6;UBERON:0001778,1.17e-09,3;UBERON:0001775,1.17e-09,3;UBERON:0001444,1.40e-09,49;UBERON:0003056,5.32e-09,61;UBERON:0001473,2.02e-08,8;UBERON:0004536,2.02e-08,8;UBERON:0006558,2.02e-08,8;UBERON:0000033,3.29e-08,56;UBERON:0002506,5.05e-08,1;UBERON:0001769,5.05e-08,1;UBERON:0000076,6.57e-08,8;UBERON:0000153,2.79e-07,62;UBERON:0007811,2.79e-07,62;UBERON:0002346,2.90e-07,86;UBERON:0002465,8.07e-07,10 | |||
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| ||
|short_description=p7@HSD17B2 | |||
}} | }} |
Latest revision as of 01:59, 18 September 2015
Short description: | p7@HSD17B2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_HSD17B2_5end |
Coexpression cluster: | C1223_Retinal_tubular_Endothelial_placenta_small_temporal_duodenum |
Association with transcript: | 39bp_to_ENST00000199936_5end |
EntrezGene: | HSD17B2 |
HGNC: | 5211 |
UniProt: | P37059 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 2.57e-21 | 3 |
visual pigment cell | 3.90e-16 | 4 |
crystallin accumulating cell | 2.64e-15 | 4 |
vertebrate lens cell | 2.64e-15 | 4 |
lens epithelial cell | 2.64e-15 | 4 |
lymphangioblast | 4.46e-11 | 6 |
endothelial cell of lymphatic vessel | 4.46e-11 | 6 |
vascular lymphangioblast | 4.46e-11 | 6 |
ciliated cell | 1.17e-09 | 3 |
ciliated epithelial cell | 1.17e-09 | 3 |
multi-ciliated epithelial cell | 1.17e-09 | 3 |
non-pigmented ciliary epithelial cell | 1.17e-09 | 3 |
pigment cell (sensu Vertebrata) | 5.05e-08 | 1 |
iris pigment epithelial cell | 5.05e-08 | 1 |
pigment cell | 5.36e-08 | 14 |
endothelial cell of vascular tree | 6.02e-07 | 24 |