FFCP PHASE1:Hg19::chr17:38612826..38612905,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:38612826..38612905,+ to FFCP PHASE1:Hg19::chr17:38612826..38612905,+: NSchange) |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:38612826..38612905,+ | |||
|coexpression_cluster_id=C353 | |||
|description=CAGE_peak_at_chr17:38612826..38612905,+ | |||
|id=chr17:38612826..38612905,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.12e-25!180;CL:0000222!2.06e-19!119;CL:0000183!3.33e-17!59;CL:0000680!1.34e-16!57;CL:0000056!1.34e-16!57;CL:0000355!1.34e-16!57;CL:0000187!3.94e-15!54;CL:0000057!5.79e-15!75;CL:0000192!9.87e-14!42;CL:0000514!9.87e-14!42;CL:0000393!8.45e-13!60;CL:0000211!8.45e-13!60;CL:0000359!2.18e-10!32;CL:0000220!5.59e-09!246;CL:0002321!7.58e-09!248 | |||
|ontology_enrichment_celltype_v019=CL:0000192;7.66e-12;43!CL:0000359;3.51e-11;32!CL:0000187;1.97e-09;55!CL:0000393;1.97e-08;61!CL:0000211;1.97e-08;61!CL:0002334;3.19e-07;12!CL:0000499;8.75e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,6.07e-20,121;CL:0000680,6.49e-19,58;CL:0000056,6.49e-19,58;CL:0000355,6.49e-19,58;CL:0000187,3.68e-17,55;CL:0000192,2.67e-16,43;CL:0000514,2.67e-16,43;CL:0000393,2.69e-14,61;CL:0000211,2.69e-14,61;CL:0000057,5.34e-14,76;CL:0000359,9.00e-12,32;CL:0002334,3.80e-07,12;CL:0000048,5.22e-07,427;CL:0000499,9.52e-07,28 | |||
|ontology_enrichment_development_v019=CL:0000514;7.66e-12;43!CL:0000355;6.29e-10;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!6.74e-22!143;UBERON:0002100!1.73e-21!216;UBERON:0000490!3.37e-17!138;UBERON:0000914!1.41e-16!83;UBERON:0002329!1.41e-16!83;UBERON:0003077!1.41e-16!83;UBERON:0003059!1.41e-16!83;UBERON:0007282!1.41e-16!83;UBERON:0009618!1.41e-16!83;UBERON:0007285!1.41e-16!83;UBERON:0003914!4.03e-16!118;UBERON:0002385!1.32e-15!63;UBERON:0001015!1.32e-15!63;UBERON:0000383!1.32e-15!63;UBERON:0001134!1.35e-15!61;UBERON:0002036!1.35e-15!61;UBERON:0003082!1.35e-15!61;UBERON:0004872!1.61e-15!84;UBERON:0002049!3.89e-15!79;UBERON:0007798!3.89e-15!79;UBERON:0004290!1.09e-14!70;UBERON:0003104!2.54e-14!238;UBERON:0009142!2.54e-14!238;UBERON:0000475!2.04e-13!365;UBERON:0000486!8.28e-13!82;UBERON:0000481!8.44e-13!347;UBERON:0001009!7.82e-12!113;UBERON:0001981!9.47e-12!60;UBERON:0007500!9.47e-12!60;UBERON:0004537!9.47e-12!60;UBERON:0006965!9.47e-12!60;UBERON:0000055!1.23e-11!69;UBERON:0004535!2.50e-11!110;UBERON:0000477!1.77e-10!286;UBERON:0009569!8.97e-10!113;UBERON:0001637!1.35e-09!42;UBERON:0003509!1.35e-09!42;UBERON:0004572!1.35e-09!42;UBERON:0000119!1.02e-08!312;UBERON:0004573!1.44e-08!33;UBERON:0004571!1.44e-08!33;UBERON:0000468!1.51e-08!659;UBERON:0000483!3.92e-08!309;UBERON:0003103!9.80e-08!69;UBERON:0000926!1.60e-07!448;UBERON:0004120!1.60e-07!448;UBERON:0006603!1.60e-07!448;UBERON:0004111!1.67e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;5.47e-09;33!UBERON:0004571;5.47e-09;33!UBERON:0001637;8.41e-08;42!UBERON:0003509;8.41e-08;42!UBERON:0004572;8.41e-08;42!UBERON:0007500;4.32e-07;56!UBERON:0001981;4.32e-07;56!UBERON:0004537;4.32e-07;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,1.10e-20,160;UBERON:0009142,1.10e-20,160;UBERON:0005256,1.62e-20,122;UBERON:0007503,3.90e-18,78;UBERON:0001134,4.81e-17,62;UBERON:0002036,4.81e-17,62;UBERON:0003082,4.81e-17,62;UBERON:0002385,1.40e-16,64;UBERON:0001015,1.40e-16,64;UBERON:0000383,1.40e-16,64;UBERON:0002100,2.66e-16,199;UBERON:0007524,1.58e-15,73;UBERON:0000490,1.70e-15,148;UBERON:0002329,2.22e-15,71;UBERON:0003059,2.22e-15,71;UBERON:0007282,2.22e-15,71;UBERON:0004290,2.22e-15,71;UBERON:0009618,2.22e-15,71;UBERON:0003914,3.68e-15,117;UBERON:0004872,3.84e-15,83;UBERON:0003077,6.87e-15,72;UBERON:0007285,6.87e-15,72;UBERON:0002049,1.32e-14,78;UBERON:0007798,1.32e-14,78;UBERON:0000486,3.02e-13,83;UBERON:0001009,2.40e-12,112;UBERON:0004535,4.54e-12,109;UBERON:0007500,1.26e-11,59;UBERON:0001981,1.26e-11,59;UBERON:0004537,1.26e-11,59;UBERON:0006965,1.26e-11,59;UBERON:0000055,4.33e-11,68;UBERON:0001637,1.33e-10,42;UBERON:0003509,1.33e-10,42;UBERON:0004572,1.33e-10,42;UBERON:0004573,9.89e-10,33;UBERON:0004571,9.89e-10,33;UBERON:0000926,1.90e-09,315;UBERON:0004120,1.90e-09,315;UBERON:0006603,1.90e-09,315;UBERON:0009569,6.95e-08,112 | |||
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| ||
|short_description=p@chr17:38612826..38612905,+ | |||
}} | }} |
Latest revision as of 16:27, 25 July 2015
Short description: | p@chr17:38612826..38612905, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:38612826..38612905, + |
Coexpression cluster: | C353_tenocyte_Nucleus_Chondrocyte_Anulus_Fibroblast_Synoviocyte_tridermal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 6.07e-20 | 121 |
muscle precursor cell | 6.49e-19 | 58 |
myoblast | 6.49e-19 | 58 |
multi-potent skeletal muscle stem cell | 6.49e-19 | 58 |
muscle cell | 3.68e-17 | 55 |
smooth muscle cell | 2.67e-16 | 43 |
smooth muscle myoblast | 2.67e-16 | 43 |
electrically responsive cell | 2.69e-14 | 61 |
electrically active cell | 2.69e-14 | 61 |
fibroblast | 5.34e-14 | 76 |
vascular associated smooth muscle cell | 9.00e-12 | 32 |
preadipocyte | 3.80e-07 | 12 |
multi fate stem cell | 5.22e-07 | 427 |
stromal cell | 9.52e-07 | 28 |