FFCP PHASE1:Hg19::chr17:38613329..38613352,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:38613329..38613352,+ to FFCP PHASE1:Hg19::chr17:38613329..38613352,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:38613329..38613352,+ | |||
|coexpression_cluster_id=C353 | |||
|description=CAGE_peak_at_chr17:38613329..38613352,+ | |||
|id=chr17:38613329..38613352,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.96e-23!180;CL:0000057!1.31e-15!75;CL:0000680!7.18e-14!57;CL:0000056!7.18e-14!57;CL:0000355!7.18e-14!57;CL:0000183!1.85e-13!59;CL:0000187!2.79e-12!54;CL:0000393!1.45e-10!60;CL:0000211!1.45e-10!60;CL:0000222!3.57e-10!119;CL:0000192!2.80e-09!42;CL:0000514!2.80e-09!42;CL:0002334!9.07e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000499;4.02e-09;28!CL:0000327;3.92e-07;15!CL:0002334;4.79e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.37e-11,76;CL:0000499,4.98e-09,28;CL:0000048,2.36e-08,427;CL:0000136,3.15e-08,15;CL:0000723,6.31e-08,433;CL:0000034,2.22e-07,441;CL:0000327,3.61e-07,15;CL:0000680,4.20e-07,58;CL:0000056,4.20e-07,58;CL:0000355,4.20e-07,58;CL:0002334,7.86e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!1.31e-17!143;UBERON:0002100!6.22e-16!216;UBERON:0000914!2.06e-15!83;UBERON:0002329!2.06e-15!83;UBERON:0003077!2.06e-15!83;UBERON:0003059!2.06e-15!83;UBERON:0007282!2.06e-15!83;UBERON:0009618!2.06e-15!83;UBERON:0007285!2.06e-15!83;UBERON:0000490!5.94e-15!138;UBERON:0001134!3.81e-13!61;UBERON:0002036!3.81e-13!61;UBERON:0003082!3.81e-13!61;UBERON:0004290!4.19e-13!70;UBERON:0002385!1.38e-12!63;UBERON:0001015!1.38e-12!63;UBERON:0000383!1.38e-12!63;UBERON:0000486!4.95e-11!82;UBERON:0002049!7.43e-11!79;UBERON:0007798!7.43e-11!79;UBERON:0003914!9.49e-10!118;UBERON:0003104!1.14e-09!238;UBERON:0009142!1.14e-09!238;UBERON:0004872!4.36e-09!84;UBERON:0001009!1.71e-08!113;UBERON:0000475!1.89e-08!365;UBERON:0004535!7.17e-08!110;UBERON:0000055!8.41e-08!69;UBERON:0001981!2.02e-07!60;UBERON:0007500!2.02e-07!60;UBERON:0004537!2.02e-07!60;UBERON:0006965!2.02e-07!60;UBERON:0001637!2.80e-07!42;UBERON:0003509!2.80e-07!42;UBERON:0004572!2.80e-07!42;UBERON:0000481!4.10e-07!347;UBERON:0000926!8.62e-07!448;UBERON:0004120!8.62e-07!448;UBERON:0006603!8.62e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0004905;7.62e-11;8!UBERON:0000982;7.62e-11;8!UBERON:0004770;7.62e-11;8!UBERON:0004457;1.73e-10;9!UBERON:0000042;1.73e-10;9!UBERON:0011135;2.01e-09;5!UBERON:0002216;2.01e-09;5!UBERON:0011134;2.01e-09;5!UBERON:0002209;2.01e-09;5!UBERON:0002213;2.01e-09;5!UBERON:0007844;2.01e-09;5!UBERON:0011138;2.01e-09;5!UBERON:0001130;2.01e-09;5!UBERON:0001066;2.01e-09;5!UBERON:0001468;2.01e-09;5!UBERON:0003688;7.44e-09;6!UBERON:0002358;7.44e-09;6!UBERON:0003684;7.44e-09;6!UBERON:0001178;7.44e-09;6!UBERON:0002204;1.38e-07;70!UBERON:0000075;2.13e-07;16!UBERON:0001434;8.43e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004905,7.51e-11,8;UBERON:0000982,7.51e-11,8;UBERON:0004770,7.51e-11,8;UBERON:0005256,6.48e-10,122;UBERON:0011135,1.98e-09,5;UBERON:0002216,1.98e-09,5;UBERON:0011134,1.98e-09,5;UBERON:0002209,1.98e-09,5;UBERON:0002213,1.98e-09,5;UBERON:0005856,1.98e-09,5;UBERON:0005866,1.98e-09,5;UBERON:0005863,1.98e-09,5;UBERON:0007844,1.98e-09,5;UBERON:0011138,1.98e-09,5;UBERON:0001130,1.98e-09,5;UBERON:0001066,1.98e-09,5;UBERON:0001468,1.98e-09,5;UBERON:0003104,3.20e-09,160;UBERON:0009142,3.20e-09,160;UBERON:0003688,6.62e-09,6;UBERON:0002358,6.62e-09,6;UBERON:0003684,6.62e-09,6;UBERON:0001178,6.62e-09,6;UBERON:0002100,4.69e-08,199;UBERON:0004457,1.89e-07,12;UBERON:0000042,1.89e-07,12;UBERON:0000075,2.13e-07,16;UBERON:0007524,5.45e-07,73;UBERON:0001134,5.95e-07,62;UBERON:0002036,5.95e-07,62;UBERON:0003082,5.95e-07,62;UBERON:0000490,9.07e-07,148;UBERON:0007503,9.44e-07,78 | |||
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| ||
|short_description=p@chr17:38613329..38613352,+ | |||
}} | }} |
Latest revision as of 16:29, 25 July 2015
Short description: | p@chr17:38613329..38613352, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:38613329..38613352, + |
Coexpression cluster: | C353_tenocyte_Nucleus_Chondrocyte_Anulus_Fibroblast_Synoviocyte_tridermal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.37e-11 | 76 |
stromal cell | 4.98e-09 | 28 |
multi fate stem cell | 2.36e-08 | 427 |
fat cell | 3.15e-08 | 15 |
somatic stem cell | 6.31e-08 | 433 |
stem cell | 2.22e-07 | 441 |
extracellular matrix secreting cell | 3.61e-07 | 15 |
muscle precursor cell | 4.20e-07 | 58 |
myoblast | 4.20e-07 | 58 |
multi-potent skeletal muscle stem cell | 4.20e-07 | 58 |
preadipocyte | 7.86e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
articulation | 7.51e-11 | 8 |
skeletal joint | 7.51e-11 | 8 |
articular system | 7.51e-11 | 8 |
trunk mesenchyme | 6.48e-10 | 122 |
intervertebral cartilage | 1.98e-09 | 5 |
symphysis | 1.98e-09 | 5 |
nonsynovial joint | 1.98e-09 | 5 |
fibrous joint | 1.98e-09 | 5 |
cartilaginous joint | 1.98e-09 | 5 |
developing mesenchymal condensation | 1.98e-09 | 5 |
pre-cartilage condensation | 1.98e-09 | 5 |
cartilaginous condensation | 1.98e-09 | 5 |
cartilage element | 1.98e-09 | 5 |
post-cranial axial skeletal system | 1.98e-09 | 5 |
vertebral column | 1.98e-09 | 5 |
intervertebral disk | 1.98e-09 | 5 |
intervertebral joint | 1.98e-09 | 5 |
mesenchyme | 3.20e-09 | 160 |
entire embryonic mesenchyme | 3.20e-09 | 160 |
omentum | 6.62e-09 | 6 |
peritoneum | 6.62e-09 | 6 |
abdominal cavity | 6.62e-09 | 6 |
visceral peritoneum | 6.62e-09 | 6 |
trunk | 4.69e-08 | 199 |
cavity lining | 1.89e-07 | 12 |
serous membrane | 1.89e-07 | 12 |
subdivision of skeletal system | 2.13e-07 | 16 |
dense mesenchyme tissue | 5.45e-07 | 73 |
skeletal muscle tissue | 5.95e-07 | 62 |
striated muscle tissue | 5.95e-07 | 62 |
myotome | 5.95e-07 | 62 |
unilaminar epithelium | 9.07e-07 | 148 |
epithelial vesicle | 9.44e-07 | 78 |