FFCP PHASE1:Hg19::chr17:79805146..79805197,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:79805146..79805197,- to FFCP PHASE1:Hg19::chr17:79805146..79805197,-: NSchange) |
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(12 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5034 | |EntrezGene=5034 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8548 | |HGNC=8548 | ||
|TSSclassifier=strong | |||
|UniProt=Q96C96 | |UniProt=Q96C96 | ||
|association_with_transcript=25bp_to_uc002kbl.1_5end | |||
|cluster_id=chr17:79805146..79805197,- | |||
|coexpression_cluster_id=C846 | |||
|description=CAGE_peak_3_at_P4HB_5end | |||
|id=chr17:79805146..79805197,- | |||
|ontology_enrichment_celltype=CL:0000548!1.03e-22!679;CL:0000004!1.03e-22!679;CL:0000255!1.03e-22!679;CL:0000012!1.98e-21!682;CL:0000055!9.50e-18!180;CL:0000220!1.25e-17!246;CL:0000144!2.50e-17!625;CL:0002371!3.74e-17!591;CL:0002321!3.79e-17!248;CL:0000222!3.96e-15!119;CL:0000066!2.93e-11!254;CL:0000680!3.21e-11!57;CL:0000056!3.21e-11!57;CL:0000355!3.21e-11!57;CL:0000003!4.20e-11!722;CL:0000183!4.44e-11!59;CL:0000187!3.86e-10!54;CL:0000192!5.86e-10!42;CL:0000514!5.86e-10!42;CL:0000393!1.01e-09!60;CL:0000211!1.01e-09!60;CL:0000057!1.70e-09!75;CL:0000063!2.81e-09!578;CL:0000359!3.53e-08!32 | |||
|ontology_enrichment_celltype_v019=CL:0000359;9.99e-08;32!CL:0000134;1.17e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.40e-16,250;CL:0000222,2.43e-15,121;CL:0000680,6.17e-11,58;CL:0000056,6.17e-11,58;CL:0000355,6.17e-11,58;CL:0000066,1.11e-10,253;CL:0000057,7.11e-10,76;CL:0000187,7.63e-10,55;CL:0000192,2.09e-09,43;CL:0000514,2.09e-09,43;CL:0000393,2.63e-09,61;CL:0000211,2.63e-09,61;CL:0000359,2.14e-08,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!5.31e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.97e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.52e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0003914!1.80e-18!118;UBERON:0000490!2.82e-15!138;UBERON:0005256!8.50e-15!143;UBERON:0004872!4.29e-13!84;UBERON:0002100!2.30e-12!216;UBERON:0000055!4.73e-12!69;UBERON:0002049!1.22e-11!79;UBERON:0007798!1.22e-11!79;UBERON:0001637!1.37e-11!42;UBERON:0003509!1.37e-11!42;UBERON:0004572!1.37e-11!42;UBERON:0001981!2.50e-11!60;UBERON:0007500!2.50e-11!60;UBERON:0004537!2.50e-11!60;UBERON:0006965!2.50e-11!60;UBERON:0003104!4.98e-11!238;UBERON:0009142!4.98e-11!238;UBERON:0004573!2.15e-10!33;UBERON:0004571!2.15e-10!33;UBERON:0000486!8.56e-10!82;UBERON:0001134!2.32e-09!61;UBERON:0002036!2.32e-09!61;UBERON:0003082!2.32e-09!61;UBERON:0002385!5.42e-09!63;UBERON:0001015!5.42e-09!63;UBERON:0000383!5.42e-09!63;UBERON:0004290!7.71e-09!70;UBERON:0000914!8.77e-09!83;UBERON:0002329!8.77e-09!83;UBERON:0003077!8.77e-09!83;UBERON:0003059!8.77e-09!83;UBERON:0007282!8.77e-09!83;UBERON:0009618!8.77e-09!83;UBERON:0007285!8.77e-09!83;UBERON:0000926!1.73e-08!448;UBERON:0004120!1.73e-08!448;UBERON:0006603!1.73e-08!448;UBERON:0001009!7.28e-08!113;UBERON:0004535!7.47e-08!110;UBERON:0009569!1.13e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.59e-09;33!UBERON:0004571;1.59e-09;33!UBERON:0001637;1.23e-08;42!UBERON:0003509;1.23e-08;42!UBERON:0004572;1.23e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,1.95e-19,117;UBERON:0000490,1.27e-15,148;UBERON:0005256,6.20e-15,122;UBERON:0003104,2.63e-14,160;UBERON:0009142,2.63e-14,160;UBERON:0004872,9.34e-13,83;UBERON:0002100,1.12e-12,199;UBERON:0001637,6.45e-12,42;UBERON:0003509,6.45e-12,42;UBERON:0004572,6.45e-12,42;UBERON:0000055,9.88e-12,68;UBERON:0002049,2.41e-11,78;UBERON:0007798,2.41e-11,78;UBERON:0007500,3.61e-11,59;UBERON:0001981,3.61e-11,59;UBERON:0004537,3.61e-11,59;UBERON:0006965,3.61e-11,59;UBERON:0007503,5.16e-11,78;UBERON:0004573,1.11e-10,33;UBERON:0004571,1.11e-10,33;UBERON:0000486,4.23e-10,83;UBERON:0001134,2.33e-09,62;UBERON:0002036,2.33e-09,62;UBERON:0003082,2.33e-09,62;UBERON:0002329,4.13e-09,71;UBERON:0003059,4.13e-09,71;UBERON:0007282,4.13e-09,71;UBERON:0004290,4.13e-09,71;UBERON:0009618,4.13e-09,71;UBERON:0007524,4.43e-09,73;UBERON:0002385,7.08e-09,64;UBERON:0001015,7.08e-09,64;UBERON:0000383,7.08e-09,64;UBERON:0003077,1.21e-08,72;UBERON:0007285,1.21e-08,72;UBERON:0001009,4.86e-08,112;UBERON:0004535,5.44e-08,109;UBERON:0009569,7.96e-07,112 | |||
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| ||
|short_description=p3@P4HB | |||
}} | }} |
Latest revision as of 08:37, 18 September 2015
Short description: | p3@P4HB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_P4HB_5end |
Coexpression cluster: | C846_pancreas_leiomyoma_Smooth_tenocyte_Fibroblast_Adipocyte_Hepatocyte |
Association with transcript: | 25bp_to_uc002kbl.1_5end |
EntrezGene: | P4HB |
HGNC: | 8548 |
UniProt: | Q96C96 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.40e-16 | 250 |
mesodermal cell | 2.43e-15 | 121 |
muscle precursor cell | 6.17e-11 | 58 |
myoblast | 6.17e-11 | 58 |
multi-potent skeletal muscle stem cell | 6.17e-11 | 58 |
epithelial cell | 1.11e-10 | 253 |
fibroblast | 7.11e-10 | 76 |
muscle cell | 7.63e-10 | 55 |
smooth muscle cell | 2.09e-09 | 43 |
smooth muscle myoblast | 2.09e-09 | 43 |
electrically responsive cell | 2.63e-09 | 61 |
electrically active cell | 2.63e-09 | 61 |
vascular associated smooth muscle cell | 2.14e-08 | 32 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.52e-07 | 14 |