FFCP PHASE1:Hg19::chr18:35145981..35146017,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr18:35145981..35146017,- to FFCP PHASE1:Hg19::chr18:35145981..35146017,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=56853 | |EntrezGene=56853 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14015 | |HGNC=14015 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BZC1 | |UniProt=Q9BZC1 | ||
|association_with_transcript=0bp_to_ENST00000334919,ENST00000361683,ENST00000361795,ENST00000412753,ENST00000420428,NM_001025087,NM_001025088,NM_001025089,NM_020180,uc002lae.2,uc002laf.2,uc002lag.2,uc002lai.2,uc010dnd.1_5end | |||
|cluster_id=chr18:35145981..35146017,- | |||
|coexpression_cluster_id=C466 | |||
|description=CAGE_peak_3_at_CELF4_5end | |||
|id=chr18:35145981..35146017,- | |||
|ontology_enrichment_celltype=CL:0000540!9.42e-07!6;CL:0000031!9.42e-07!6;CL:0000404!9.42e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000123;2.35e-07;2!CL:0000242;2.35e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,2.32e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.32e-18;82!UBERON:0006215;1.24e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.10e-74!57;UBERON:0005068!1.10e-74!57;UBERON:0006241!1.10e-74!57;UBERON:0007135!1.10e-74!57;UBERON:0001017!1.69e-69!82;UBERON:0005743!7.12e-68!86;UBERON:0000073!3.38e-67!94;UBERON:0001016!3.38e-67!94;UBERON:0002616!1.08e-62!59;UBERON:0002780!3.60e-61!41;UBERON:0001890!3.60e-61!41;UBERON:0006240!3.60e-61!41;UBERON:0000955!9.57e-61!69;UBERON:0006238!9.57e-61!69;UBERON:0003080!1.94e-59!42;UBERON:0003075!9.55e-53!86;UBERON:0007284!9.55e-53!86;UBERON:0002346!1.18e-49!90;UBERON:0002020!2.12e-49!34;UBERON:0003528!2.12e-49!34;UBERON:0001893!7.05e-49!34;UBERON:0002791!3.25e-47!33;UBERON:0001869!2.21e-46!32;UBERON:0003056!6.83e-42!61;UBERON:0002619!7.97e-41!22;UBERON:0007023!8.28e-38!115;UBERON:0001950!4.11e-37!20;UBERON:0004121!8.91e-36!169;UBERON:0000956!3.25e-35!25;UBERON:0000203!3.25e-35!25;UBERON:0000924!1.69e-34!173;UBERON:0006601!1.69e-34!173;UBERON:0000033!1.73e-31!123;UBERON:0000153!2.80e-29!129;UBERON:0007811!2.80e-29!129;UBERON:0000025!1.74e-18!194;UBERON:0003076!7.76e-16!15;UBERON:0003057!7.76e-16!15;UBERON:0002420!1.56e-15!9;UBERON:0007245!1.56e-15!9;UBERON:0010009!1.56e-15!9;UBERON:0010011!1.56e-15!9;UBERON:0000454!1.56e-15!9;UBERON:0002308!1.87e-15!9;UBERON:0000125!1.87e-15!9;UBERON:0001871!2.49e-15!7;UBERON:0001894!1.67e-13!7;UBERON:0006222!1.67e-13!7;UBERON:0004111!5.76e-13!241;UBERON:0000200!3.68e-12!6;UBERON:0009663!4.53e-12!7;UBERON:0004733!1.45e-11!12;UBERON:0002028!1.45e-11!12;UBERON:0007277!1.45e-11!12;UBERON:0000483!1.40e-10!309;UBERON:0004732!1.63e-10!13;UBERON:0002298!2.06e-10!8;UBERON:0000349!2.53e-10!5;UBERON:0000119!2.58e-10!312;UBERON:0000064!4.12e-10!219;UBERON:0001872!5.18e-10!5;UBERON:0002021!6.02e-10!5;UBERON:0000477!1.41e-09!286;UBERON:0003296!2.51e-09!4;UBERON:0010133!2.51e-09!4;UBERON:0000369!3.53e-08!4;UBERON:0002435!3.53e-08!4;UBERON:0000204!3.53e-08!4;UBERON:0010082!3.53e-08!4;UBERON:0002680!1.39e-07!9;UBERON:0001895!1.39e-07!9;UBERON:0010092!1.39e-07!9;UBERON:0000922!1.40e-07!612;UBERON:0000475!2.93e-07!365;UBERON:0002771!3.22e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.64e-62;22!UBERON:0001869;4.75e-60;32!UBERON:0003528;9.38e-58;34!UBERON:0002020;9.38e-58;34!UBERON:0001950;1.60e-56;20!UBERON:0002791;2.82e-56;32!UBERON:0002780;1.43e-54;41!UBERON:0001890;1.43e-54;41!UBERON:0001893;2.40e-54;34!UBERON:0000956;3.13e-54;25!UBERON:0000203;3.13e-54;25!UBERON:0000073;4.83e-49;53!UBERON:0002616;4.83e-49;53!UBERON:0000955;3.56e-33;68!UBERON:0001016;4.89e-30;83!UBERON:0001017;4.90e-30;75!UBERON:0001871;8.88e-20;6!UBERON:0000200;6.47e-18;6!UBERON:0001894;2.32e-15;7!UBERON:0000349;9.70e-15;5!UBERON:0002420;1.22e-14;9!UBERON:0007245;1.22e-14;9!UBERON:0010009;1.22e-14;9!UBERON:0010011;1.22e-14;9!UBERON:0000454;1.22e-14;9!UBERON:0001872;1.26e-14;5!UBERON:0002021;1.33e-14;5!UBERON:0000125;1.34e-14;9!UBERON:0002308;1.34e-14;9!UBERON:0004733;3.98e-14;12!UBERON:0002028;3.98e-14;12!UBERON:0003296;1.64e-13;4!UBERON:0010133;1.64e-13;4!UBERON:0004732;6.24e-13;13!UBERON:0002784;2.95e-12;4!UBERON:0000369;1.31e-11;4!UBERON:0002435;1.31e-11;4!UBERON:0000204;1.31e-11;4!UBERON:0002298;1.32e-11;6!UBERON:0011216;1.79e-11;132!UBERON:0002680;2.65e-11;9!UBERON:0001895;2.65e-11;9!UBERON:0007023;7.64e-11;114!UBERON:0009663;7.65e-10;7!UBERON:0001870;8.68e-10;3!UBERON:0000988;2.15e-09;3!UBERON:0005383;2.63e-09;3!UBERON:0005382;2.63e-09;3!UBERON:0010314;5.75e-08;132!UBERON:0001905;1.10e-07;2!UBERON:0002757;1.10e-07;2!UBERON:0010134;1.10e-07;2!UBERON:0005408;1.10e-07;2!UBERON:0001899;1.10e-07;2!UBERON:0000007;1.67e-07;2!UBERON:0002771;2.61e-07;2!UBERON:0002702;2.95e-07;2!UBERON:0001954;3.33e-07;2!UBERON:0003022;3.33e-07;2!UBERON:0002421;3.33e-07;2!UBERON:0002600;3.33e-07;2!UBERON:0001876;6.53e-07;2!UBERON:0002148;7.46e-07;2!UBERON:0006331;7.46e-07;2!UBERON:0009662;7.46e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.33e-93,56;UBERON:0005068,2.33e-93,56;UBERON:0006241,2.33e-93,56;UBERON:0007135,2.33e-93,56;UBERON:0000073,3.25e-90,53;UBERON:0002616,3.25e-90,53;UBERON:0000955,6.83e-78,68;UBERON:0006238,6.83e-78,68;UBERON:0002780,3.26e-77,41;UBERON:0001890,3.26e-77,41;UBERON:0003080,3.26e-77,41;UBERON:0006240,3.26e-77,41;UBERON:0001016,3.54e-77,89;UBERON:0001017,2.98e-76,81;UBERON:0003528,1.30e-67,34;UBERON:0002020,1.30e-67,34;UBERON:0001869,4.73e-67,32;UBERON:0003075,1.12e-63,82;UBERON:0007284,1.12e-63,82;UBERON:0001893,9.56e-63,34;UBERON:0002791,2.64e-62,32;UBERON:0002619,3.77e-62,22;UBERON:0002346,3.43e-60,86;UBERON:0001950,2.09e-56,20;UBERON:0000956,3.23e-54,25;UBERON:0000203,3.23e-54,25;UBERON:0010371,5.33e-53,104;UBERON:0003056,1.52e-52,61;UBERON:0004121,3.77e-38,171;UBERON:0000924,3.77e-38,171;UBERON:0006601,3.77e-38,171;UBERON:0010314,3.92e-37,132;UBERON:0007023,1.43e-34,114;UBERON:0011216,3.65e-30,223;UBERON:0000025,4.88e-23,192;UBERON:0001871,7.62e-20,6;UBERON:0000200,7.31e-18,6;UBERON:0003076,3.70e-17,15;UBERON:0003057,3.70e-17,15;UBERON:0004111,4.59e-16,240;UBERON:0001894,1.93e-15,7;UBERON:0006222,1.93e-15,7;UBERON:0000349,4.92e-15,5;UBERON:0002420,8.02e-15,9;UBERON:0007245,8.02e-15,9;UBERON:0010009,8.02e-15,9;UBERON:0010011,8.02e-15,9;UBERON:0000454,8.02e-15,9;UBERON:0000125,9.96e-15,9;UBERON:0002308,9.96e-15,9;UBERON:0001872,1.48e-14,5;UBERON:0002021,1.86e-14,5;UBERON:0004733,3.45e-14,12;UBERON:0002028,3.45e-14,12;UBERON:0007277,3.45e-14,12;UBERON:0003296,1.67e-13,4;UBERON:0010133,1.67e-13,4;UBERON:0000483,2.52e-13,306;UBERON:0000119,4.48e-13,309;UBERON:0004732,5.48e-13,13;UBERON:0002784,2.34e-12,4;UBERON:0000369,9.65e-12,4;UBERON:0002435,9.65e-12,4;UBERON:0000204,9.65e-12,4;UBERON:0010082,9.65e-12,4;UBERON:0002298,1.20e-11,6;UBERON:0002680,2.29e-11,9;UBERON:0001895,2.29e-11,9;UBERON:0010092,2.29e-11,9;UBERON:0009663,6.44e-10,7;UBERON:0001870,8.71e-10,3;UBERON:0000988,1.92e-09,3;UBERON:0005383,2.22e-09,3;UBERON:0005382,2.22e-09,3;UBERON:0000923,4.07e-08,560;UBERON:0010316,4.07e-08,560;UBERON:0005291,4.07e-08,560;UBERON:0006598,4.07e-08,560;UBERON:0010317,4.07e-08,560;UBERON:0002532,4.07e-08,560;UBERON:0002050,5.91e-08,564;UBERON:0001905,1.10e-07,2;UBERON:0002757,1.10e-07,2;UBERON:0010134,1.10e-07,2;UBERON:0005408,1.10e-07,2;UBERON:0001899,1.10e-07,2;UBERON:0000007,1.70e-07,2;UBERON:0000922,1.98e-07,592;UBERON:0002771,2.46e-07,2;UBERON:0001954,2.62e-07,2;UBERON:0003022,2.62e-07,2;UBERON:0002421,2.62e-07,2;UBERON:0002600,2.62e-07,2;UBERON:0005423,2.73e-07,581;UBERON:0002702,3.05e-07,2;UBERON:0001876,4.79e-07,2;UBERON:0002148,6.45e-07,2;UBERON:0006331,6.45e-07,2;UBERON:0009662,6.45e-07,2 | |||
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| ||
|short_description=p3@CELF4 | |||
}} | }} |
Latest revision as of 10:58, 19 September 2015
Short description: | p3@CELF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CELF4_5end |
Coexpression cluster: | C466_cerebellum_retinoblastoma_pineal_small_pituitary_parietal_pons |
Association with transcript: | 0bp_to_ENST00000334919, ENST00000361683, ENST00000361795, ENST00000412753, ENST00000420428, NM_001025087, NM_001025088, NM_001025089, NM_020180, uc002lae.2, uc002laf.2, uc002lag.2, uc002lai.2, uc010dnd.1_5end |
EntrezGene: | CELF4 |
HGNC: | 14015 |
UniProt: | Q9BZC1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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Merkel cell | 2.32e-07 | 2 |