FFCP PHASE1:Hg19::chr19:50373015..50373044,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:50373015..50373044,- to FFCP PHASE1:Hg19::chr19:50373015..50373044,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:50373015..50373044,- | |||
|description=CAGE_peak_at_chr19:50373015..50373044,- | |||
|id=chr19:50373015..50373044,- | |||
|ontology_enrichment_celltype=CL:0000220!7.15e-08!246;CL:0002321!9.69e-08!248 | |||
|ontology_enrichment_celltype_v019=CL:0002231;1.81e-08;3!CL:0002262;6.46e-07;2!CL:1000398;6.46e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002231,1.21e-08,3;CL:0002262,5.47e-07,2;CL:1000398,5.47e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003937;2.00e-09;12!UBERON:0005399;2.00e-09;12!UBERON:0000077;8.61e-08;27!UBERON:0002367;9.47e-08;11!UBERON:0010147;9.47e-08;11!UBERON:0001281;6.46e-07;2!UBERON:0003497;6.46e-07;2!UBERON:0003909;6.46e-07;2!UBERON:0003835;6.46e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003937,8.84e-10,12;UBERON:0005399,8.84e-10,12;UBERON:0002367,5.80e-08,11;UBERON:0010147,5.80e-08,11;UBERON:0009846,5.80e-08,11;UBERON:0003353,5.80e-08,11;UBERON:0004902,5.80e-08,11;UBERON:0003820,5.80e-08,11;UBERON:0009847,5.80e-08,11;UBERON:0000077,2.75e-07,29;UBERON:0001281,5.47e-07,2;UBERON:0003497,5.47e-07,2;UBERON:0003909,5.47e-07,2;UBERON:0003835,5.47e-07,2;UBERON:0003102,6.25e-07,99 | |||
|phase1_expression=1.81678379270557,0.428201047781966,0.563817616383885,0,2.23480547213644,0.872338524100369,0,3.15859936713415,1.30592814099919,0,0.697801167972428,0.218441372130172,0.527533956456907,0,0,0,0.602694528023977,1.46062018077475,0,0.369363174230364,0.204000691244253,0.626909442956176,0,0,0,0,0,0,0.393364276848904,0,0,1.83884244895785,0.6024118375565,0,0.0774672005803016,0.426507697462265,0,0,0,0,0.447830948479849,0.647787332037959,0.515151135268373,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0.521482918420201,0,0,0.368277635987565,0,0,0.212604299965044,0,0.112328631146495,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0843174571537,2.00535164254356,0.579386075843295,0,0.486634870302636,0,0,0.087834785693126,0.196468613246569,0,1.11235332835329,0,0,0,0,0,0,0.39752481473341,0,0,0,0.419499436209906,1.6507082516404,0.208994966536811,0,0.35576626268671,0,2.81980521976403,0,0.488124115096339,0.367663080345869,0.81014194788176,0.357198913136319,0,0.337834441449967,1.53316637465883,0.949265659568129,0,0,0,0,0.496971951695318,1.39293562831038,0.264818361626438,0.573673241497627,1.77334191099179,0,0,0.49333509683432,0,0.269421344139376,0,0.605429710579726,0,0,1.87296046098192,0,0.597794722207204,0.23486899728753,0,0.140450806702248,0.408308342509787,0,0.309977343527296,2.37600571456411,1.48360157567134,0.910161361938026,0.718618141816238,0,0.125118519871964,0,0,0.30648779579902,0.751190294532984,0.113432183160021,0,0,0.423863802319124,0,0.412210116953756,0,0.744467425326359,0,0.292311015483596,0,0.0920498986422993,0.484938170456436,0,0.403008392910561,0,1.35282597214308,0.272746120590835,0.573609190778008,0,0.132529768321485,0.116193942869518,0.10366105501537,0,0.72995471815166,0,0,1.38134921352481,0,0,0.118306800039844,0.337169380156203,0.241011029883482,0.110293972732394,0.653638332277218,0.71181185733329,0.269662616320329,0.392442930250692,0,5.16708818237254,2.80483547606892,0,0,0,0,0,0,0.245976877086227,0,2.74375713521564,2.24803506515239,0.201057944823262,0.0925884451585296,0,2.07986957055916,1.44331342025273,0.115930404975077,0,0.433099343283221,0.462985512576611,0.380508304469197,0,0,0,0.234004265139238,0,0.93733833986777,0.16798212819886,0.567100388969546,0.0895585227028483,0,0.383382679165211,0,0.528290604079356,0.829312462163088,0.720599767084807,0.37872730027914,0,1.52795370223311,1.17217447210047,0,0.719792448923265,0,0.857479297891735,0.112131084345361,0,0.07333828582095,0.129271715757778,3.57656445851882,0.845302752556,1.32969058292435,0,0.257207374262142,0,0.532844358032199,0.142977993658148,1.62786481617433,0,0.325736184293735,0,0.791951872933429,0,0,0.699810938274399,0,0.502257091432126,0,1.67737398844108,1.14861935834114,0,0.144781306667579,0.410952645100767,0.358121926479791,0,0,0,0,1.27047312111232,1.30139853857622,0,0.502548796003046,0.637938751653163,0,0,0.414415513436035,0.12269149171914,1.00034104211935,0,0.415941723061614,0.356857977594324,0.157702415033935,0,1.80567659836631,0,1.03473071292505,0,0.368738337083406,2.60650843404249,1.37060810223918,0,0,0,0.106727557803444,1.5156378572313,3.32870879020994,0,0.248107807818777,0,1.40330047216537,1.15325234330131,1.53512174720011,0.64341568457443,0,0.154209693802656,1.42049380250502,0.98552587216571,1.55776328755086,0.232420756919918,1.32945394550784,2.00506470303285,1.84161977871793,0.574072240823034,0.364182336013434,1.04899531967539,0,0,2.35304930753057,0,0.211103257785751,1.13733384070897,0.850468526382578,0,1.54227252690289,0.541892875087706,0.501689773854853,0,0,0.223874754722178,0,0.522870902049801,0.769350375349168,0.328014645699706,1.62689197332152,0.721287081534056,0.27470839445503,0.082509499920588,0,1.30012049207304,0,1.83674364755032,0.154048617114644,0,0.137836572484531,0.107420244868274,0,0.170453254832202,0.623224249527161,2.14870389969272,0.384380134730212,0,1.0115778085555,2.78907329578371,0.31481234683064,0,0,1.06461206063404,0,0.9266210955196,0,0,0,0.190630193923825,1.02359116524534,0,0.636406495851874,0.78494864019923,0.179872457583315,0,0.353437207037059,1.01091240786658,0,0,0.48763373908959,0.487426979262569,2.11300293513511,1.63799893689583,1.97967604735198,0,0,1.32687795048244,0.876901770507525,2.31510213706675,1.31178950409327,0.405820753925408,0,0,0,0,0.35667105148125,0,1.47775344708365,0.658589785919804,0,0,0,0,0,0.470719003883896,0.43050537267123,0,0.443430153536676,0,0.507447609232169,0.764637207142375,0,0,0,0,0,0,0.640944426764839,0,0,0,0,0,0,0,0,0.211673582723883,0,0.561594356226918,0,0.156679895773023,0,0.169291777801603,0,0,0,0,0,0,0,0,0,1.23087398947712,0,0,0,0.18714054040822,0.73254089635947,0.242721043499027,0,0,0.23874448473769,0.296964680832639,0,0,0,0.445234820091624,0,0,0.19924798825107,0,0,0.102268682502155,0.123084805461069,0,0.179736702294654,0.179021174675609,0,0.394573622547734,0,0,0,0,0,0,0.0874599999961957,0.724999575434793,0.227586896570999,0,0.23638768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| ||
|short_description=p@chr19:50373015..50373044,- | |||
}} | }} |
Latest revision as of 16:15, 27 July 2015
Short description: | p@chr19:50373015..50373044, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:50373015..50373044, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of prostate | 1.21e-08 | 3 |
endothelial cell of sinusoid | 5.47e-07 | 2 |
endothelial cell of hepatic sinusoid | 5.47e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
sex gland | 8.84e-10 | 12 |
male reproductive gland | 8.84e-10 | 12 |
prostate gland | 5.80e-08 | 11 |
male accessory sex gland | 5.80e-08 | 11 |
embryonic cloacal epithelium | 5.80e-08 | 11 |
epithelium of hindgut | 5.80e-08 | 11 |
urogenital sinus epithelium | 5.80e-08 | 11 |
prostate bud | 5.80e-08 | 11 |
prostate field | 5.80e-08 | 11 |
mixed endoderm/mesoderm-derived structure | 2.75e-07 | 29 |
hepatic sinusoid | 5.47e-07 | 2 |
abdomen blood vessel | 5.47e-07 | 2 |
sinusoid | 5.47e-07 | 2 |
abdominal segment blood vessel | 5.47e-07 | 2 |
surface structure | 6.25e-07 | 99 |