FFCP PHASE1:Hg19::chr1:22979582..22979590,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:22979582..22979590,+ to FFCP PHASE1:Hg19::chr1:22979582..22979590,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=713 | |EntrezGene=713 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1242 | |HGNC=1242 | ||
|TSSclassifier=strong | |||
|UniProt=P02746,D6RA08 | |UniProt=P02746,D6RA08 | ||
|association_with_transcript=-91bp_to_ENST00000314933,ENST00000432749,NM_000491,uc001bgd.2_5end | |||
|cluster_id=chr1:22979582..22979590,+ | |||
|coexpression_cluster_id=C67 | |||
|description=CAGE_peak_5_at_C1QB_5end | |||
|id=chr1:22979582..22979590,+ | |||
|ontology_enrichment_celltype=CL:0002619!9.41e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0002619;1.69e-17;3!CL:0000235;2.62e-14;6!CL:0000840;1.69e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002619,1.70e-17,3;CL:0000235,2.49e-14,6;CL:0000840,1.92e-08,5;CL:0001029,1.92e-08,5;CL:0002194,4.42e-07,59;CL:0000576,4.42e-07,59;CL:0000040,4.42e-07,59;CL:0000559,4.42e-07,59;CL:0002009,8.53e-07,61 | |||
|ontology_enrichment_development_v019=UBERON:0004872;3.46e-12;7!UBERON:0006965;6.09e-11;2!UBERON:0006241;1.41e-07;3!UBERON:0003057;1.41e-07;3!UBERON:0010115;7.15e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.84e-90!115;UBERON:0001049!3.06e-42!57;UBERON:0005068!3.06e-42!57;UBERON:0006241!3.06e-42!57;UBERON:0007135!3.06e-42!57;UBERON:0001017!6.14e-36!82;UBERON:0005743!1.88e-35!86;UBERON:0002616!1.44e-33!59;UBERON:0000955!2.68e-32!69;UBERON:0006238!2.68e-32!69;UBERON:0000073!7.83e-31!94;UBERON:0001016!7.83e-31!94;UBERON:0003080!5.31e-30!42;UBERON:0003075!8.91e-29!86;UBERON:0007284!8.91e-29!86;UBERON:0002780!1.41e-28!41;UBERON:0001890!1.41e-28!41;UBERON:0006240!1.41e-28!41;UBERON:0002346!6.11e-27!90;UBERON:0001893!3.35e-21!34;UBERON:0002020!3.54e-21!34;UBERON:0003528!3.54e-21!34;UBERON:0000153!5.10e-20!129;UBERON:0007811!5.10e-20!129;UBERON:0002791!5.23e-20!33;UBERON:0003056!1.29e-19!61;UBERON:0001869!2.20e-18!32;UBERON:0000033!2.58e-18!123;UBERON:0002298!1.02e-14!8;UBERON:0000062!4.88e-14!511;UBERON:0004121!5.94e-14!169;UBERON:0002619!6.47e-14!22;UBERON:0000924!2.47e-13!173;UBERON:0006601!2.47e-13!173;UBERON:0003076!3.97e-13!15;UBERON:0003057!3.97e-13!15;UBERON:0002420!1.68e-12!9;UBERON:0007245!1.68e-12!9;UBERON:0010009!1.68e-12!9;UBERON:0010011!1.68e-12!9;UBERON:0000454!1.68e-12!9;UBERON:0002308!3.98e-12!9;UBERON:0000125!3.98e-12!9;UBERON:0000956!7.21e-12!25;UBERON:0000203!7.21e-12!25;UBERON:0000025!1.18e-11!194;UBERON:0001950!3.99e-11!20;UBERON:0000477!2.41e-10!286;UBERON:0004111!2.82e-10!241;UBERON:0000349!8.06e-10!5;UBERON:0000467!8.44e-10!625;UBERON:0000480!9.60e-10!626;UBERON:0001894!2.71e-09!7;UBERON:0006222!2.71e-09!7;UBERON:0009663!3.62e-09!7;UBERON:0000468!3.67e-09!659;UBERON:0004733!9.09e-09!12;UBERON:0002028!9.09e-09!12;UBERON:0007277!9.09e-09!12;UBERON:0001871!5.07e-08!7;UBERON:0004732!5.62e-08!13;UBERON:0000475!8.07e-08!365;UBERON:0000922!1.01e-07!612;UBERON:0000923!1.20e-07!604;UBERON:0005291!1.20e-07!604;UBERON:0006598!1.20e-07!604;UBERON:0002532!1.20e-07!604;UBERON:0002050!1.35e-07!605;UBERON:0005423!1.35e-07!605;UBERON:0001896!6.31e-07!3;UBERON:0005290!6.31e-07!3;UBERON:0010096!6.31e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001954;6.09e-11;2!UBERON:0003022;6.09e-11;2!UBERON:0002421;6.09e-11;2!UBERON:0002600;6.09e-11;2!UBERON:0000349;1.55e-09;5!UBERON:0002106;2.67e-08;3!UBERON:0001896;1.41e-07;3!UBERON:0002240;1.41e-07;3!UBERON:0005174;1.41e-07;3!UBERON:0005290;1.41e-07;3!UBERON:0001137;1.41e-07;3!UBERON:0002363;7.15e-07;1!UBERON:0007023;7.33e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.11e-18,114;UBERON:0001954,6.10e-11,2;UBERON:0003022,6.10e-11,2;UBERON:0002421,6.10e-11,2;UBERON:0002600,6.10e-11,2;UBERON:0000349,1.67e-09,5;UBERON:0001049,1.79e-08,56;UBERON:0005068,1.79e-08,56;UBERON:0006241,1.79e-08,56;UBERON:0007135,1.79e-08,56;UBERON:0002106,2.77e-08,3;UBERON:0004854,2.77e-08,3;UBERON:0009034,2.77e-08,3;UBERON:0002095,2.77e-08,3;UBERON:0004782,2.77e-08,3;UBERON:0003281,2.77e-08,3;UBERON:0009664,2.77e-08,3;UBERON:0002296,2.77e-08,3;UBERON:0005602,2.77e-08,3;UBERON:0001179,2.77e-08,3;UBERON:0006293,2.77e-08,3;UBERON:0002240,1.15e-07,3;UBERON:0005174,1.15e-07,3;UBERON:0001137,1.15e-07,3;UBERON:0001896,1.32e-07,3;UBERON:0005290,1.32e-07,3;UBERON:0010096,1.32e-07,3;UBERON:0001017,1.38e-07,81;UBERON:0002405,6.47e-07,93;UBERON:0002363,6.96e-07,1;UBERON:0007645,6.96e-07,1;UBERON:0007647,6.96e-07,1;UBERON:0010115,6.96e-07,1;UBERON:0002171,9.67e-07,1;UBERON:0006518,9.67e-07,1;UBERON:0008949,9.67e-07,1;UBERON:0000101,9.67e-07,1;UBERON:0002167,9.67e-07,1 | |||
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| ||
|short_description=p5@C1QB | |||
}} | }} |
Latest revision as of 06:27, 16 September 2015
Short description: | p5@C1QB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_C1QB_5end |
Coexpression cluster: | C67_CD14_Monocytederived_Macrophage_dura_Dendritic_spleen_lung |
Association with transcript: | -91bp_to_ENST00000314933, ENST00000432749, NM_000491, uc001bgd.2_5end |
EntrezGene: | C1QB |
HGNC: | 1242 |
UniProt: | P02746D6RA08 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult endothelial progenitor cell | 1.70e-17 | 3 |
macrophage | 2.49e-14 | 6 |
immature conventional dendritic cell | 1.92e-08 | 5 |
common dendritic progenitor | 1.92e-08 | 5 |
monopoietic cell | 4.42e-07 | 59 |
monocyte | 4.42e-07 | 59 |
monoblast | 4.42e-07 | 59 |
promonocyte | 4.42e-07 | 59 |
macrophage dendritic cell progenitor | 8.53e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.11e-18 | 114 |
Ammon's horn | 6.10e-11 | 2 |
lobe parts of cerebral cortex | 6.10e-11 | 2 |
hippocampal formation | 6.10e-11 | 2 |
limbic lobe | 6.10e-11 | 2 |
limbic system | 1.67e-09 | 5 |
neural tube | 1.79e-08 | 56 |
neural rod | 1.79e-08 | 56 |
future spinal cord | 1.79e-08 | 56 |
neural keel | 1.79e-08 | 56 |
spleen | 2.77e-08 | 3 |
gastrointestinal system mesentery | 2.77e-08 | 3 |
stomach region | 2.77e-08 | 3 |
mesentery | 2.77e-08 | 3 |
gastrointestinal system serosa | 2.77e-08 | 3 |
mesentery of stomach | 2.77e-08 | 3 |
gut mesentery | 2.77e-08 | 3 |
dorsal mesentery | 2.77e-08 | 3 |
dorsal mesogastrium | 2.77e-08 | 3 |
peritoneal cavity | 2.77e-08 | 3 |
spleen primordium | 2.77e-08 | 3 |
spinal cord | 1.15e-07 | 3 |
dorsal region element | 1.15e-07 | 3 |
dorsum | 1.15e-07 | 3 |
medulla oblongata | 1.32e-07 | 3 |
myelencephalon | 1.32e-07 | 3 |
future myelencephalon | 1.32e-07 | 3 |
central nervous system | 1.38e-07 | 81 |
immune system | 6.47e-07 | 93 |
dura mater | 6.96e-07 | 1 |
future meninx | 6.96e-07 | 1 |
ectomeninx | 6.96e-07 | 1 |
future dura mater | 6.96e-07 | 1 |
lower lobe of right lung | 9.67e-07 | 1 |
right lung lobe | 9.67e-07 | 1 |
lower lobe of lung | 9.67e-07 | 1 |
lobe of lung | 9.67e-07 | 1 |
right lung | 9.67e-07 | 1 |