FFCP PHASE1:Hg19::chr1:35247907..35247950,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:35247907..35247950,+ to FFCP PHASE1:Hg19::chr1:35247907..35247950,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2707 | |EntrezGene=2707 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4285 | |HGNC=4285 | ||
|TSSclassifier=strong | |||
|UniProt=O75712 | |UniProt=O75712 | ||
|association_with_transcript=0bp_to_NM_001005752,uc001bxy.2_5end | |||
|cluster_id=chr1:35247907..35247950,+ | |||
|description=CAGE_peak_8_at_GJB3_5end | |||
|id=chr1:35247907..35247950,+ | |||
|ontology_enrichment_celltype=CL:0002076!4.01e-31!43;CL:0000066!2.41e-28!254;CL:0000223!2.01e-23!59;CL:0002251!1.20e-18!21;CL:0002368!7.65e-16!13;CL:0002159!2.42e-14!13;CL:0000622!5.05e-10!5;CL:0002202!9.72e-10!9;CL:0002632!9.72e-10!9;CL:0000244!8.90e-09!4;CL:0000731!8.90e-09!4;CL:0000154!2.94e-08!6;CL:0000076!5.53e-08!62;CL:0000349!1.53e-07!3;CL:0002577!1.53e-07!3;CL:0002077!2.63e-07!33;CL:0002621!6.74e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002159;5.25e-22;14!CL:0002076;6.76e-20;42!CL:0002368;5.94e-18;13!CL:0000349;1.65e-16;19!CL:0000622;6.13e-16;5!CL:0000154;3.10e-13;6!CL:0002577;1.17e-11;3!CL:0002251;2.31e-11;20!CL:0002621;1.71e-10;3!CL:0002166;4.71e-10;3!CL:0002077;5.42e-10;34!CL:0000307;6.27e-10;3!CL:0002623;6.47e-10;3!CL:0000362;2.29e-09;9!CL:0000240;3.71e-09;6!CL:0000311;3.71e-09;6!CL:0000079;3.71e-09;6!CL:0000237;3.71e-09;6!CL:0002202;1.01e-08;9!CL:0002632;1.01e-08;9!CL:0000150;1.02e-08;9!CL:0000244;1.28e-08;4!CL:0000731;1.28e-08;4!CL:0002327;3.66e-08;4!CL:0002536;4.00e-08;2!CL:0000575;6.78e-08;2!CL:0000317;9.98e-08;2!CL:1000448;9.98e-08;2!CL:0002308;9.98e-08;2!CL:0002140;9.98e-08;2!CL:0002537;7.05e-07;5!CL:0000312;8.01e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,3.47e-25,42;CL:0000066,1.48e-24,253;CL:0002159,4.19e-22,14;CL:0002368,6.02e-18,13;CL:0000223,7.86e-17,58;CL:0000349,1.89e-16,19;CL:0000622,7.55e-16,5;CL:0000154,3.69e-13,6;CL:0002577,1.15e-11,3;CL:0002077,1.63e-11,34;CL:0002251,2.09e-11,20;CL:0002621,1.39e-10,3;CL:0002166,3.90e-10,3;CL:0000068,6.27e-10,3;CL:0000069,6.27e-10,3;CL:0000307,6.27e-10,3;CL:0000377,6.27e-10,3;CL:0002623,8.33e-10,3;CL:0000362,2.25e-09,9;CL:0000240,3.38e-09,6;CL:0000311,3.38e-09,6;CL:0000079,3.38e-09,6;CL:0000237,3.38e-09,6;CL:0000036,3.38e-09,6;CL:0000357,3.38e-09,6;CL:0000114,3.38e-09,6;CL:0002202,1.03e-08,9;CL:0002632,1.03e-08,9;CL:0000150,1.14e-08,9;CL:0000244,1.36e-08,4;CL:0000731,1.36e-08,4;CL:0002327,3.16e-08,4;CL:0002536,3.94e-08,2;CL:0000076,5.18e-08,63;CL:0000575,6.13e-08,2;CL:0000317,9.50e-08,2;CL:1000448,9.50e-08,2;CL:0002308,9.50e-08,2;CL:0002140,9.50e-08,2;CL:0002537,7.49e-07,5;CL:0000312,8.10e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000223;3.99e-10;58!CL:0000377;6.27e-10;3!CL:0000357;3.71e-09;6!CL:0000114;3.71e-09;6 | |||
|ontology_enrichment_disease=DOID:1749!3.27e-19!14;DOID:305!2.95e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:1749;6.95e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,7.17e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0005631!3.27e-19!14;UBERON:0000158!3.27e-19!14;UBERON:0004119!1.45e-18!169;UBERON:0000925!1.45e-18!169;UBERON:0006595!1.45e-18!169;UBERON:0003124!1.26e-13!7;UBERON:0001004!1.57e-13!72;UBERON:0000166!3.27e-12!21;UBERON:0000077!2.14e-10!130;UBERON:0000365!2.15e-10!5;UBERON:0001007!3.72e-10!155;UBERON:0001555!3.72e-10!155;UBERON:0007026!3.72e-10!155;UBERON:0000161!6.57e-10!35;UBERON:0000165!7.73e-10!28;UBERON:0000930!7.73e-10!28;UBERON:0000478!8.07e-10!24;UBERON:0007196!2.20e-09!14;UBERON:0001558!2.20e-09!14;UBERON:0003729!4.23e-09!5;UBERON:0001987!8.23e-09!4;UBERON:0004340!8.23e-09!4;UBERON:0000344!9.54e-09!12;UBERON:0005910!1.46e-08!6;UBERON:0004923!1.51e-08!57;UBERON:0000064!2.97e-08!219;UBERON:0000305!1.03e-07!7;UBERON:0000065!1.45e-07!53;UBERON:0003343!1.63e-07!4;UBERON:0004785!1.63e-07!4;UBERON:0000974!1.75e-07!10;UBERON:0001949!6.74e-07!3;UBERON:0001041!7.89e-07!98;UBERON:0003102!9.07e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;4.41e-16;10!UBERON:0000158;4.41e-16;10!UBERON:0000486;6.39e-13;12!UBERON:0000478;1.30e-12;24!UBERON:0000305;1.70e-12;7!UBERON:0000365;2.44e-11;5!UBERON:0001949;1.71e-10;3!UBERON:0005910;1.91e-09;6!UBERON:0000161;2.28e-09;19!UBERON:0000166;2.28e-09;19!UBERON:0000165;3.41e-09;28!UBERON:0000344;6.94e-09;20!UBERON:0001987;7.88e-09;4!UBERON:0001911;3.66e-08;4!UBERON:0002419;9.98e-08;2!UBERON:0007771;9.98e-08;2!UBERON:0003297;9.98e-08;2!UBERON:0001821;9.98e-08;2!UBERON:0003487;9.98e-08;2!UBERON:0001820;9.98e-08;2!UBERON:0001708;1.21e-07;4!UBERON:0008895;1.21e-07;4!UBERON:0004923;3.62e-07;55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,4.04e-23,14;UBERON:0000158,4.04e-23,14;UBERON:0003102,1.21e-12,99;UBERON:0000478,1.45e-12,24;UBERON:0000305,1.81e-12,7;UBERON:0003124,2.63e-12,7;UBERON:0004923,7.13e-12,66;UBERON:0004119,2.27e-11,160;UBERON:0000925,2.27e-11,160;UBERON:0006595,2.27e-11,160;UBERON:0000365,2.97e-11,5;UBERON:0004871,7.37e-11,8;UBERON:0001949,1.39e-10,3;UBERON:0001004,1.70e-10,74;UBERON:0000161,4.95e-10,36;UBERON:0000166,6.22e-10,22;UBERON:0005910,2.24e-09,6;UBERON:0000033,3.39e-09,56;UBERON:0000344,6.67e-09,20;UBERON:0001987,7.79e-09,4;UBERON:0004340,7.79e-09,4;UBERON:0000165,7.89e-09,29;UBERON:0000930,7.89e-09,29;UBERON:0001911,3.16e-08,4;UBERON:0005333,3.16e-08,4;UBERON:0008425,3.16e-08,4;UBERON:0005311,3.16e-08,4;UBERON:0000153,5.46e-08,62;UBERON:0007811,5.46e-08,62;UBERON:0002419,9.50e-08,2;UBERON:0007771,9.50e-08,2;UBERON:0003297,9.50e-08,2;UBERON:0001821,9.50e-08,2;UBERON:0003487,9.50e-08,2;UBERON:0001820,9.50e-08,2;UBERON:0005089,9.50e-08,2;UBERON:0005088,9.50e-08,2;UBERON:0001708,1.05e-07,4;UBERON:0008895,1.05e-07,4;UBERON:0001444,9.24e-07,49 | |||
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| ||
|short_description=p8@GJB3 | |||
}} | }} |
Latest revision as of 17:53, 17 September 2015
Short description: | p8@GJB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_GJB3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_001005752, uc001bxy.2_5end |
EntrezGene: | GJB3 |
HGNC: | 4285 |
UniProt: | O75712 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 7.17e-10 | 14 |