FFCP PHASE1:Hg19::chr1:41249986..41250002,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:41249986..41250002,+ to FFCP PHASE1:Hg19::chr1:41249986..41250002,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9132 | |EntrezGene=9132 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6298 | |HGNC=6298 | ||
|TSSclassifier=strong | |||
|UniProt=P56696 | |UniProt=P56696 | ||
|association_with_transcript=302bp_to_AF105202_5end | |||
|cluster_id=chr1:41249986..41250002,+ | |||
|description=CAGE_peak_3_at_KCNQ4_5end | |||
|id=chr1:41249986..41250002,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.95e-10;3!UBERON:0000358;1.41e-08;1!UBERON:0004874;1.41e-08;1!UBERON:0006242;3.56e-08;1!UBERON:0005425;3.56e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3493;1.19e-14;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,1.93e-14,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.63e-43!115;UBERON:0001049!8.05e-16!57;UBERON:0005068!8.05e-16!57;UBERON:0006241!8.05e-16!57;UBERON:0007135!8.05e-16!57;UBERON:0003075!1.39e-14!86;UBERON:0007284!1.39e-14!86;UBERON:0002346!3.77e-14!90;UBERON:0002616!7.35e-13!59;UBERON:0005743!2.60e-12!86;UBERON:0000073!1.06e-11!94;UBERON:0001016!1.06e-11!94;UBERON:0002780!3.12e-11!41;UBERON:0001890!3.12e-11!41;UBERON:0006240!3.12e-11!41;UBERON:0000955!7.13e-11!69;UBERON:0006238!7.13e-11!69;UBERON:0003080!8.44e-11!42;UBERON:0001017!1.23e-10!82;UBERON:0000153!3.54e-09!129;UBERON:0007811!3.54e-09!129;UBERON:0000033!1.63e-08!123;UBERON:0003056!2.00e-08!61;UBERON:0001893!2.14e-08!34;UBERON:0000481!3.53e-08!347;UBERON:0002020!3.80e-08!34;UBERON:0003528!3.80e-08!34;UBERON:0002791!9.31e-08!33;UBERON:0002298!5.76e-07!8;UBERON:0002619!6.09e-07!22;UBERON:0001869!6.30e-07!32;UBERON:0004121!6.42e-07!169;UBERON:0000924!7.33e-07!173;UBERON:0006601!7.33e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0006834;1.41e-08;1!UBERON:0000989;1.41e-08;1!UBERON:0008811;1.41e-08;1!UBERON:0002426;1.41e-08;1!UBERON:0003831;1.41e-08;1!UBERON:0003898;1.41e-08;1!UBERON:0004830;1.41e-08;1!UBERON:0003830;1.41e-08;1!UBERON:0005175;1.41e-08;1!UBERON:0001774;1.41e-08;1!UBERON:0001103;1.41e-08;1!UBERON:0002146;3.56e-08;1!UBERON:0000941;3.56e-08;1!UBERON:0001785;3.56e-08;1!UBERON:0002464;3.56e-08;1!UBERON:0004904;3.56e-08;1!UBERON:0001021;3.56e-08;1!UBERON:0005623;3.56e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000966,5.64e-11,6;UBERON:0005388,5.64e-11,6;UBERON:0001802,5.64e-11,6;UBERON:0000989,1.31e-08,1;UBERON:0008811,1.31e-08,1;UBERON:0006258,1.31e-08,1;UBERON:0005876,1.31e-08,1;UBERON:0004874,1.31e-08,1;UBERON:0002426,1.41e-08,1;UBERON:0003831,1.41e-08,1;UBERON:0003898,1.41e-08,1;UBERON:0004830,1.41e-08,1;UBERON:0003830,1.41e-08,1;UBERON:0005175,1.41e-08,1;UBERON:0001774,1.41e-08,1;UBERON:0001103,1.41e-08,1;UBERON:0010084,1.41e-08,1;UBERON:0006834,1.63e-08,1;UBERON:0002146,2.17e-08,1;UBERON:0005623,2.17e-08,1;UBERON:0000941,3.33e-08,1;UBERON:0001785,3.33e-08,1;UBERON:0002464,3.33e-08,1;UBERON:0004904,3.33e-08,1;UBERON:0001021,3.33e-08,1;UBERON:0003902,3.33e-08,1;UBERON:0005425,3.33e-08,1;UBERON:0007023,8.25e-08,114;UBERON:0001781,1.20e-07,4 | |||
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| ||
|short_description=p3@KCNQ4 | |||
}} | }} |
Latest revision as of 02:02, 18 September 2015
Short description: | p3@KCNQ4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_KCNQ4_5end |
Coexpression cluster: | NA |
Association with transcript: | 302bp_to_AF105202_5end |
EntrezGene: | KCNQ4 |
HGNC: | 6298 |
UniProt: | P56696 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retina | 5.64e-11 | 6 |
photoreceptor array | 5.64e-11 | 6 |
posterior segment of eyeball | 5.64e-11 | 6 |
penis | 1.31e-08 | 1 |
intromittent organ | 1.31e-08 | 1 |
lateral plate mesenchyme | 1.31e-08 | 1 |
undifferentiated genital tubercle | 1.31e-08 | 1 |
somatopleure | 1.31e-08 | 1 |
chest muscle | 1.41e-08 | 1 |
respiratory system muscle | 1.41e-08 | 1 |
skeletal muscle of trunk | 1.41e-08 | 1 |
respiratory system skeletal muscle | 1.41e-08 | 1 |
thoracic segment muscle | 1.41e-08 | 1 |
chest organ | 1.41e-08 | 1 |
muscle of trunk | 1.41e-08 | 1 |
diaphragm | 1.41e-08 | 1 |
future diaphragm | 1.41e-08 | 1 |
uterus or analog | 1.63e-08 | 1 |
pulmonary valve | 2.17e-08 | 1 |
semi-lunar valve | 2.17e-08 | 1 |
cranial nerve II | 3.33e-08 | 1 |
cranial nerve | 3.33e-08 | 1 |
nerve trunk | 3.33e-08 | 1 |
nerve connecting eye with brain | 3.33e-08 | 1 |
nerve | 3.33e-08 | 1 |
retinal neural layer | 3.33e-08 | 1 |
presumptive neural retina | 3.33e-08 | 1 |
adult organism | 8.25e-08 | 114 |
layer of retina | 1.20e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.93e-14 | 2 |