FFCP PHASE1:Hg19::chr20:48808114..48808168,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr20:48808114..48808168,+ to FFCP PHASE1:Hg19::chr20:48808114..48808168,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1051 | |EntrezGene=1051 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=1834 | |HGNC=1834 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BSC0 | |UniProt=Q9BSC0 | ||
|association_with_transcript=-24bp_to_BC005132_5end | |||
|cluster_id=chr20:48808114..48808168,+ | |||
|description=CAGE_peak_5_at_CEBPB_5end | |||
|id=chr20:48808114..48808168,+ | |||
|ontology_enrichment_celltype=CL:0000766!5.04e-12!76;CL:0002057!3.93e-11!42;CL:0000860!6.42e-11!45;CL:0002194!2.40e-08!63;CL:0000576!2.40e-08!63;CL:0000040!2.40e-08!63;CL:0000559!2.40e-08!63;CL:0000557!2.49e-08!71;CL:0000839!3.66e-08!70;CL:0002009!2.51e-07!65 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.68e-11;33!CL:0002057;7.68e-11;33!CL:0000473;7.46e-10;39!CL:0000234;7.46e-10;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,4.79e-13,72;CL:0000473,2.82e-12,48;CL:0000234,2.82e-12,48;CL:0000860,1.11e-11,42;CL:0002057,1.11e-11,42;CL:0000557,3.24e-09,67;CL:0002194,4.74e-09,59;CL:0000576,4.74e-09,59;CL:0000040,4.74e-09,59;CL:0000559,4.74e-09,59;CL:0000839,7.47e-09,66;CL:0002009,3.98e-08,61 | |||
|ontology_enrichment_development_v019=CL:0002057;8.37e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.57e-09!80;UBERON:0001474!1.87e-08!86;UBERON:0002619!7.32e-08!22;UBERON:0001869!1.62e-07!32;UBERON:0002390!2.51e-07!102;UBERON:0003061!2.51e-07!102;UBERON:0004765!3.01e-07!101;UBERON:0001434!3.01e-07!101;UBERON:0001893!5.42e-07!34;UBERON:0001950!5.80e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.06e-08;22!UBERON:0001869;1.68e-07;32!UBERON:0001950;2.63e-07;20!UBERON:0002791;4.56e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.26e-10,76;UBERON:0001474,1.92e-09,82;UBERON:0002619,1.53e-08,22;UBERON:0001869,1.56e-08,32;UBERON:0002791,5.36e-08,32;UBERON:0002390,6.09e-08,98;UBERON:0003061,6.09e-08,98;UBERON:0001893,8.37e-08,34;UBERON:0002405,1.28e-07,93;UBERON:0004765,1.38e-07,90;UBERON:0001950,1.40e-07,20;UBERON:0003528,2.16e-07,34;UBERON:0002020,2.16e-07,34;UBERON:0002193,3.84e-07,108;UBERON:0001434,3.92e-07,100 | |||
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| ||
|short_description=p5@CEBPB | |||
}} | }} |
Latest revision as of 20:58, 16 September 2015
Short description: | p5@CEBPB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CEBPB_5end |
Coexpression cluster: | NA |
Association with transcript: | -24bp_to_BC005132_5end |
EntrezGene: | CEBPB |
HGNC: | 1834 |
UniProt: | Q9BSC0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 4.79e-13 | 72 |
defensive cell | 2.82e-12 | 48 |
phagocyte | 2.82e-12 | 48 |
classical monocyte | 1.11e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.11e-11 | 42 |
granulocyte monocyte progenitor cell | 3.24e-09 | 67 |
monopoietic cell | 4.74e-09 | 59 |
monocyte | 4.74e-09 | 59 |
monoblast | 4.74e-09 | 59 |
promonocyte | 4.74e-09 | 59 |
myeloid lineage restricted progenitor cell | 7.47e-09 | 66 |
macrophage dendritic cell progenitor | 3.98e-08 | 61 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.26e-10 | 76 |
bone element | 1.92e-09 | 82 |
regional part of cerebral cortex | 1.53e-08 | 22 |
cerebral hemisphere | 1.56e-08 | 32 |
regional part of telencephalon | 5.36e-08 | 32 |
hematopoietic system | 6.09e-08 | 98 |
blood island | 6.09e-08 | 98 |
telencephalon | 8.37e-08 | 34 |
immune system | 1.28e-07 | 93 |
skeletal element | 1.38e-07 | 90 |
neocortex | 1.40e-07 | 20 |
brain grey matter | 2.16e-07 | 34 |
gray matter | 2.16e-07 | 34 |
hemolymphoid system | 3.84e-07 | 108 |
skeletal system | 3.92e-07 | 100 |