FFCP PHASE1:Hg19::chr21:47545938..47545951,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr21:47545938..47545951,+ to FFCP PHASE1:Hg19::chr21:47545938..47545951,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1292 | |EntrezGene=1292 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=2212 | |HGNC=2212 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-452bp_to_uc002zic.1_5end | |||
|cluster_id=chr21:47545938..47545951,+ | |||
|coexpression_cluster_id=C198 | |||
|description=CAGE_peak_19_at_COL6A2_5end | |||
|id=chr21:47545938..47545951,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.64e-35!180;CL:0000057!1.02e-21!75;CL:0000680!1.70e-15!57;CL:0000056!1.70e-15!57;CL:0000355!1.70e-15!57;CL:0000187!1.21e-14!54;CL:0000183!4.65e-14!59;CL:0000393!4.31e-13!60;CL:0000211!4.31e-13!60;CL:0000048!2.69e-12!430;CL:0000723!2.16e-11!436;CL:0000192!4.04e-11!42;CL:0000514!4.04e-11!42;CL:0000034!4.19e-11!444;CL:0002620!1.59e-10!23;CL:0000359!2.44e-08!32;CL:0002570!1.39e-07!8;CL:0000499!3.83e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.76e-15;23!CL:0002570;4.73e-12;8!CL:0000723;4.91e-09;61!CL:0002320;2.43e-08;188!CL:0000134;3.35e-08;55!CL:0000057;4.55e-08;73!CL:0000499;1.16e-07;28!CL:0002559;1.53e-07;5!CL:0000048;1.98e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.02e-21,76;CL:0000048,2.73e-17,427;CL:0000723,1.31e-16,433;CL:0000034,9.81e-16,441;CL:0002620,3.26e-15,23;CL:0002320,7.36e-13,361;CL:0002570,6.37e-12,8;CL:0000134,3.48e-10,354;CL:0000187,7.97e-09,55;CL:0000680,8.32e-09,58;CL:0000056,8.32e-09,58;CL:0000355,8.32e-09,58;CL:0002559,9.80e-08,5;CL:0000219,1.00e-07,386;CL:0000499,1.38e-07,28;CL:0000393,2.54e-07,61;CL:0000211,2.54e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!7.75e-20!83;UBERON:0002329!7.75e-20!83;UBERON:0003077!7.75e-20!83;UBERON:0003059!7.75e-20!83;UBERON:0007282!7.75e-20!83;UBERON:0009618!7.75e-20!83;UBERON:0007285!7.75e-20!83;UBERON:0004290!9.80e-20!70;UBERON:0000486!1.99e-16!82;UBERON:0001134!9.17e-16!61;UBERON:0002036!9.17e-16!61;UBERON:0003082!9.17e-16!61;UBERON:0002385!1.74e-15!63;UBERON:0001015!1.74e-15!63;UBERON:0000383!1.74e-15!63;UBERON:0005256!1.76e-14!143;UBERON:0002199!2.41e-11!45;UBERON:0002416!2.41e-11!45;UBERON:0003102!2.31e-10!95;UBERON:0002100!8.42e-10!216;UBERON:0001013!4.20e-09!14;UBERON:0000475!8.12e-09!365;UBERON:0004872!1.22e-08!84;UBERON:0002097!2.57e-08!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0002199;2.30e-13;46!UBERON:0002416;2.30e-13;46!UBERON:0001013;1.30e-11;14!UBERON:0002097;7.00e-11;41!UBERON:0003102;1.38e-10;50!UBERON:0002067;5.07e-09;9!UBERON:0004905;1.06e-08;8!UBERON:0000982;1.06e-08;8!UBERON:0004770;1.06e-08;8!UBERON:0002384;2.09e-08;198!UBERON:0002072;2.84e-08;5!UBERON:0002385;1.52e-07;31!UBERON:0001015;1.52e-07;31!UBERON:0000383;1.52e-07;31!UBERON:0002073;1.53e-07;5!UBERON:0011135;3.13e-07;5!UBERON:0002216;3.13e-07;5!UBERON:0011134;3.13e-07;5!UBERON:0002209;3.13e-07;5!UBERON:0002213;3.13e-07;5!UBERON:0007844;3.13e-07;5!UBERON:0011138;3.13e-07;5!UBERON:0001130;3.13e-07;5!UBERON:0001066;3.13e-07;5!UBERON:0001468;3.13e-07;5!UBERON:0004573;4.76e-07;33!UBERON:0004571;4.76e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,5.04e-20,46;UBERON:0002416,5.04e-20,46;UBERON:0002097,1.14e-14,41;UBERON:0003102,1.95e-14,99;UBERON:0007524,4.66e-14,73;UBERON:0002329,1.48e-13,71;UBERON:0003059,1.48e-13,71;UBERON:0007282,1.48e-13,71;UBERON:0004290,1.48e-13,71;UBERON:0009618,1.48e-13,71;UBERON:0003077,3.15e-13,72;UBERON:0007285,3.15e-13,72;UBERON:0002384,2.47e-12,371;UBERON:0000486,3.38e-12,83;UBERON:0001013,1.17e-11,14;UBERON:0007503,1.88e-11,78;UBERON:0005256,2.04e-10,122;UBERON:0003104,8.33e-10,160;UBERON:0009142,8.33e-10,160;UBERON:0004905,4.46e-09,8;UBERON:0000982,4.46e-09,8;UBERON:0004770,4.46e-09,8;UBERON:0002067,6.83e-09,9;UBERON:0004016,6.83e-09,9;UBERON:0010083,6.83e-09,9;UBERON:0001134,1.57e-08,62;UBERON:0002036,1.57e-08,62;UBERON:0003082,1.57e-08,62;UBERON:0002072,1.82e-08,5;UBERON:0002385,4.79e-08,64;UBERON:0001015,4.79e-08,64;UBERON:0000383,4.79e-08,64;UBERON:0002073,9.80e-08,5;UBERON:0005086,9.80e-08,5;UBERON:0011135,1.15e-07,5;UBERON:0002216,1.15e-07,5;UBERON:0011134,1.15e-07,5;UBERON:0002209,1.15e-07,5;UBERON:0002213,1.15e-07,5;UBERON:0005856,1.15e-07,5;UBERON:0005866,1.15e-07,5;UBERON:0005863,1.15e-07,5;UBERON:0007844,1.15e-07,5;UBERON:0011138,1.15e-07,5;UBERON:0001130,1.15e-07,5;UBERON:0001066,1.15e-07,5;UBERON:0001468,1.15e-07,5;UBERON:0000926,2.92e-07,315;UBERON:0004120,2.92e-07,315;UBERON:0006603,2.92e-07,315;UBERON:0004573,4.14e-07,33;UBERON:0004571,4.14e-07,33 | |||
|phase1_expression=0.908391896352783,4.71021152560163,1.55049844505568,2.00146596706261,2.23480547213644,0.872338524100369,5.06599756336621,1.89515962028049,4.17897005119742,0.245733936501509,0,0,0,1.73272894144065,4.63956326019082,4.03395087871065,4.82155622419182,7.30310090387373,3.90346239032406,0.369363174230364,1.22400414746552,0.940364164434263,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,1.34140171940727,0.255725123687061,1.44575660953827,1.00267582127178,5.35932120155048,0.795285947051099,2.43317435151318,0.0945348171640679,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,1.51956613997496,0.794455084879313,3.15520282823695,1.06400514659507,0,1.06748995729705,1.2333377420858,0.622422070799533,0.67355336034844,0.653847612453835,0.454072282934794,1.15235184896,0.234321431833797,4.37024107562449,0,4.33401173600223,1.05691048779388,1.45685649931318,1.12360645361799,0.408308342509787,4.17636678860011,1.85986406116378,2.37600571456411,4.45080472701402,0,2.87447256726495,0,0.750711119231785,0,0,6.12975591598039,1.20190447125277,0.453728732640084,1.61450672119976,1.70845911054854,1.05965950579781,2.40072876867522,1.33968288009971,1.8034837803194,0.744467425326359,1.18143432568886,1.46155507741798,1.00973509697646,1.28869858099219,3.55621325001386,3.55009592516614,1.61203357164224,1.01736355386293,0,0,0,0.365921118388786,0,0.116193942869518,0.207322110030741,0,0,1.56449532329816,27.0161194041012,2.76269842704961,3.25057549622385,2.88751792667834,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,5.88034845542168,0,0,0,0,0,0.343135620597051,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0.822619941626588,0,0,0,0,0.51336800074665,0.258543431515556,17.8828222925941,3.381211010224,1.06375246633948,1.04007436911366,0,0,0.799266537048298,1.28680194292333,2.17048642156577,0,2.28015329005615,0.710783897485092,0,0.904318131178758,0,0.299918973546171,0,0,0,0.718874566474748,3.44585807502342,0,0.579125226670317,1.2328579353023,0.179060963239896,0,0.197030760201927,0.431255149719035,0,0,0,0,0,0,0,0,0,2.69921281782108,5.00170521059677,1.89885516589815,2.9115920614313,3.92543775353756,1.41932173530541,0.585707074963566,0.601892199455438,2.27407504055985,1.03473071292505,0,1.84369168541703,2.69339204851057,0.979005787313703,5.49029478097369,0,0.215714200818617,0,0,1.66435439510497,0.907170879989041,1.48864684691266,0.61384789315225,2.52594084989766,0.640695746278505,0.511707249066704,1.60853921143608,0,8.63574285294871,7.45759246315134,0.574890092096664,10.904343012856,6.97262270759755,0.120859449591622,0.200506470303285,0,1.26295892981067,7.28364672026868,4.98272776845812,0,0.0770153371044148,0.784349769176855,0,0.211103257785751,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.206082023295445,0.183138929636687,0,0.574265537996172,0,1.6068392984416,2.61010939388729,2.15668063960502,1.22802939780904,1.37836572484531,2.25582514223375,3.62541734785571,0.767039646744908,1.24644849905432,0,0,0,0,0.929691098594572,3.77774816196768,0,0.308033580176089,0,0,1.29726953372744,0.143124886741991,0.372158369359667,0.316379424718726,0.190630193923825,0.767693373934002,0,1.27281299170375,3.13979456079692,0.179872457583315,2.47083326762449,1.06031162111118,0,0,0.842516912477962,0,3.41198885483798,3.16950440270266,0.818999468447914,4.66637925447252,1.13008116620243,0.551365343546124,2.65375590096488,1.31535265576129,0.578775534266688,1.31178950409327,0.202910376962704,0.92947049429925,0.845086807596724,0.143411352204052,0.491245205065606,0,0.354761064070598,6.33322905892992,6.58589785919804,0,1.74967360122491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0.71623345421307,0,0,0,0.140669416410513,0.222617410045812,0,0,1.59398390600856,0,0,0,0,2.48831670129446,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0.173624994933292,0,0.120596438625408,0,0,0,0,0,0,0.538651809526579,0.227884111694002,0,0.0897576444097721,0,0.31900115973192,0.824378340616761,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0.313932918407225,0,0.284609546029793,0,0.173559738335131,0,0,1.22308667769421,0,0,0,0,0.484945082442097,0,1.12990370390266,0,0,0,0,0,1.06726497369676,0.599428828746391,0,0,0,0,0,0,0.271808412147228,0,0.101998217636322,0.577901179803038,0,0,0,0,0,0.837847203816763,0.458320848023367,0.717873024576814,0.199679000498991,0.429226048136571,0,0.134366944973453,0.720599767084807,0,0,0,0,0.0984274815147488,0,0,0.136203406111576,0.964518890790115,0.275078873194468,0,0,0,0,0,0,0.209818352539992,0.105600336519406,0,0,0.71469532637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| ||
|short_description=p19@COL6A2 | |||
}} | }} |
Latest revision as of 23:07, 18 September 2015
Short description: | p19@COL6A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_COL6A2_5end |
Coexpression cluster: | C198_Mesenchymal_Hair_Hepatic_Fibroblast_Smooth_tenocyte_Pericytes |
Association with transcript: | -452bp_to_uc002zic.1_5end |
EntrezGene: | COL6A2 |
HGNC: | 2212 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.02e-21 | 76 |
multi fate stem cell | 2.73e-17 | 427 |
somatic stem cell | 1.31e-16 | 433 |
stem cell | 9.81e-16 | 441 |
skin fibroblast | 3.26e-15 | 23 |
connective tissue cell | 7.36e-13 | 361 |
mesenchymal stem cell of adipose | 6.37e-12 | 8 |
mesenchymal cell | 3.48e-10 | 354 |
muscle cell | 7.97e-09 | 55 |
muscle precursor cell | 8.32e-09 | 58 |
myoblast | 8.32e-09 | 58 |
multi-potent skeletal muscle stem cell | 8.32e-09 | 58 |
hair follicle cell | 9.80e-08 | 5 |
motile cell | 1.00e-07 | 386 |
stromal cell | 1.38e-07 | 28 |
electrically responsive cell | 2.54e-07 | 61 |
electrically active cell | 2.54e-07 | 61 |