FFCP PHASE1:Hg19::chr2:100938922..100938932,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:100938922..100938932,- to FFCP PHASE1:Hg19::chr2:100938922..100938932,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=164832 | |EntrezGene=164832 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24788 | |HGNC=24788 | ||
|TSSclassifier=strong | |||
|UniProt=Q1L5Z9 | |UniProt=Q1L5Z9 | ||
|association_with_transcript=262bp_to_ENST00000393437,NM_198461,uc002tal.3_5end | |||
|cluster_id=chr2:100938922..100938932,- | |||
|coexpression_cluster_id=C35 | |||
|description=CAGE_peak_3_at_LONRF2_5end | |||
|id=chr2:100938922..100938932,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000123;9.44e-12;2!CL:0000242;9.44e-12;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,1.00e-11,2 | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.78e-17;3!UBERON:0006601;3.00e-15;82!UBERON:0010122;1.67e-12;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.38e-67!57;UBERON:0005068!1.38e-67!57;UBERON:0006241!1.38e-67!57;UBERON:0007135!1.38e-67!57;UBERON:0001017!2.10e-60!82;UBERON:0000955!3.57e-59!69;UBERON:0006238!3.57e-59!69;UBERON:0005743!9.57e-59!86;UBERON:0002616!1.38e-56!59;UBERON:0000073!4.91e-55!94;UBERON:0001016!4.91e-55!94;UBERON:0002780!9.56e-53!41;UBERON:0001890!9.56e-53!41;UBERON:0006240!9.56e-53!41;UBERON:0003080!3.37e-51!42;UBERON:0007023!1.64e-48!115;UBERON:0003075!2.61e-46!86;UBERON:0007284!2.61e-46!86;UBERON:0002346!1.85e-43!90;UBERON:0002020!3.27e-42!34;UBERON:0003528!3.27e-42!34;UBERON:0001893!4.79e-42!34;UBERON:0002791!1.70e-40!33;UBERON:0001869!1.23e-39!32;UBERON:0003056!3.91e-33!61;UBERON:0000033!3.18e-32!123;UBERON:0004121!4.07e-31!169;UBERON:0000153!5.25e-31!129;UBERON:0007811!5.25e-31!129;UBERON:0002619!3.46e-30!22;UBERON:0000924!6.47e-30!173;UBERON:0006601!6.47e-30!173;UBERON:0000956!2.57e-28!25;UBERON:0000203!2.57e-28!25;UBERON:0001950!3.26e-27!20;UBERON:0000025!1.05e-17!194;UBERON:0003076!9.12e-17!15;UBERON:0003057!9.12e-17!15;UBERON:0002420!5.16e-16!9;UBERON:0007245!5.16e-16!9;UBERON:0010009!5.16e-16!9;UBERON:0010011!5.16e-16!9;UBERON:0000454!5.16e-16!9;UBERON:0002308!1.64e-15!9;UBERON:0000125!1.64e-15!9;UBERON:0004733!7.57e-13!12;UBERON:0002028!7.57e-13!12;UBERON:0007277!7.57e-13!12;UBERON:0004111!9.42e-13!241;UBERON:0009663!1.07e-12!7;UBERON:0000475!2.47e-12!365;UBERON:0001894!5.29e-12!7;UBERON:0006222!5.29e-12!7;UBERON:0004732!1.17e-11!13;UBERON:0000200!4.14e-11!6;UBERON:0001871!4.26e-11!7;UBERON:0000483!1.56e-10!309;UBERON:0000119!3.00e-10!312;UBERON:0002298!1.19e-09!8;UBERON:0000477!1.33e-09!286;UBERON:0000349!1.37e-09!5;UBERON:0001872!2.41e-09!5;UBERON:0002680!6.08e-09!9;UBERON:0001895!6.08e-09!9;UBERON:0010092!6.08e-09!9;UBERON:0000369!1.54e-08!4;UBERON:0002435!1.54e-08!4;UBERON:0000204!1.54e-08!4;UBERON:0010082!1.54e-08!4;UBERON:0000064!7.93e-08!219;UBERON:0003296!1.22e-07!4;UBERON:0010133!1.22e-07!4;UBERON:0000481!2.37e-07!347;UBERON:0000062!2.37e-07!511;UBERON:0005383!7.10e-07!3;UBERON:0005382!7.10e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;3.66e-60;32!UBERON:0003528;1.76e-56;34!UBERON:0002020;1.76e-56;34!UBERON:0002791;3.38e-55;32!UBERON:0001893;5.20e-55;34!UBERON:0002780;1.79e-52;41!UBERON:0001890;1.79e-52;41!UBERON:0000073;1.52e-48;53!UBERON:0002616;1.52e-48;53!UBERON:0002619;2.44e-48;22!UBERON:0001950;2.57e-46;20!UBERON:0000956;2.17e-42;25!UBERON:0000203;2.17e-42;25!UBERON:0000955;2.81e-38;68!UBERON:0001017;2.64e-31;75!UBERON:0002420;2.38e-29;9!UBERON:0007245;2.38e-29;9!UBERON:0010009;2.38e-29;9!UBERON:0010011;2.38e-29;9!UBERON:0000454;2.38e-29;9!UBERON:0001871;3.06e-27;6!UBERON:0001872;8.24e-26;5!UBERON:0001016;2.81e-25;83!UBERON:0000369;4.57e-23;4!UBERON:0002435;4.57e-23;4!UBERON:0000204;4.57e-23;4!UBERON:0000200;4.24e-22;6!UBERON:0000125;1.35e-21;9!UBERON:0002308;1.35e-21;9!UBERON:0009663;7.60e-20;7!UBERON:0005383;6.82e-18;3!UBERON:0005382;6.82e-18;3!UBERON:0000349;1.52e-17;5!UBERON:0002680;9.95e-15;9!UBERON:0001895;9.95e-15;9!UBERON:0002784;1.47e-12;4!UBERON:0001873;1.67e-12;2!UBERON:0001894;2.74e-12;7!UBERON:0003296;2.76e-12;4!UBERON:0010133;2.76e-12;4!UBERON:0001876;6.82e-12;2!UBERON:0002771;9.44e-12;2!UBERON:0007023;1.40e-11;114!UBERON:0001905;2.22e-11;2!UBERON:0002757;2.22e-11;2!UBERON:0010134;2.22e-11;2!UBERON:0005408;2.22e-11;2!UBERON:0001899;2.22e-11;2!UBERON:0004733;5.47e-11;12!UBERON:0002028;5.47e-11;12!UBERON:0011216;8.69e-11;132!UBERON:0004732;4.00e-10;13!UBERON:0002037;9.19e-09;6!UBERON:0000988;7.19e-08;3!UBERON:0010314;7.78e-08;132!UBERON:0001874;4.20e-07;1!UBERON:0001882;6.78e-07;1!UBERON:0005403;6.78e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.50e-83,56;UBERON:0005068,1.50e-83,56;UBERON:0006241,1.50e-83,56;UBERON:0007135,1.50e-83,56;UBERON:0000073,1.05e-82,53;UBERON:0002616,1.05e-82,53;UBERON:0002780,7.27e-74,41;UBERON:0001890,7.27e-74,41;UBERON:0003080,7.27e-74,41;UBERON:0006240,7.27e-74,41;UBERON:0000955,6.94e-72,68;UBERON:0006238,6.94e-72,68;UBERON:0001017,7.90e-68,81;UBERON:0001869,9.07e-67,32;UBERON:0001893,1.09e-62,34;UBERON:0003528,1.20e-62,34;UBERON:0002020,1.20e-62,34;UBERON:0001016,1.44e-60,89;UBERON:0002791,1.60e-60,32;UBERON:0003075,1.87e-55,82;UBERON:0007284,1.87e-55,82;UBERON:0002346,1.28e-52,86;UBERON:0010371,6.99e-49,104;UBERON:0002619,1.89e-48,22;UBERON:0003056,2.66e-48,61;UBERON:0001950,1.91e-46,20;UBERON:0000956,1.74e-42,25;UBERON:0000203,1.74e-42,25;UBERON:0007023,1.01e-38,114;UBERON:0010314,1.31e-34,132;UBERON:0004121,3.45e-33,171;UBERON:0000924,3.45e-33,171;UBERON:0006601,3.45e-33,171;UBERON:0002420,1.51e-29,9;UBERON:0007245,1.51e-29,9;UBERON:0010009,1.51e-29,9;UBERON:0010011,1.51e-29,9;UBERON:0000454,1.51e-29,9;UBERON:0001871,2.05e-27,6;UBERON:0001872,1.82e-25,5;UBERON:0000369,5.44e-23,4;UBERON:0002435,5.44e-23,4;UBERON:0000204,5.44e-23,4;UBERON:0010082,5.44e-23,4;UBERON:0011216,3.55e-22,223;UBERON:0000200,4.67e-22,6;UBERON:0000125,1.51e-21,9;UBERON:0002308,1.51e-21,9;UBERON:0000025,2.86e-20,192;UBERON:0009663,6.32e-20,7;UBERON:0005383,6.86e-18,3;UBERON:0005382,6.86e-18,3;UBERON:0000349,1.40e-17,5;UBERON:0004111,5.76e-15,240;UBERON:0002680,1.08e-14,9;UBERON:0001895,1.08e-14,9;UBERON:0010092,1.08e-14,9;UBERON:0001873,1.73e-12,2;UBERON:0010122,1.73e-12,2;UBERON:0000483,2.05e-12,306;UBERON:0002784,2.56e-12,4;UBERON:0003076,3.06e-12,15;UBERON:0003057,3.06e-12,15;UBERON:0000119,3.13e-12,309;UBERON:0001894,3.19e-12,7;UBERON:0006222,3.19e-12,7;UBERON:0003296,3.50e-12,4;UBERON:0010133,3.50e-12,4;UBERON:0001876,4.94e-12,2;UBERON:0002771,5.51e-12,2;UBERON:0001905,4.90e-11,2;UBERON:0002757,4.90e-11,2;UBERON:0010134,4.90e-11,2;UBERON:0005408,4.90e-11,2;UBERON:0001899,4.90e-11,2;UBERON:0004733,5.79e-11,12;UBERON:0002028,5.79e-11,12;UBERON:0007277,5.79e-11,12;UBERON:0004732,4.22e-10,13;UBERON:0002037,7.56e-09,6;UBERON:0006215,7.56e-09,6;UBERON:0000988,1.02e-07,3;UBERON:0001874,4.09e-07,1;UBERON:0001882,8.03e-07,1;UBERON:0005403,8.03e-07,1 | |||
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| ||
|short_description=p3@LONRF2 | |||
}} | }} |
Latest revision as of 23:02, 15 September 2015
Short description: | p3@LONRF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LONRF2_5end |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | 262bp_to_ENST00000393437, NM_198461, uc002tal.3_5end |
EntrezGene: | LONRF2 |
HGNC: | 24788 |
UniProt: | Q1L5Z9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 1.00e-11 | 2 |