FFCP PHASE1:Hg19::chr2:110873422..110873434,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:110873422..110873434,- to FFCP PHASE1:Hg19::chr2:110873422..110873434,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7851 | |EntrezGene=7851 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6818 | |HGNC=6818 | ||
|TSSclassifier=strong | |||
|UniProt=F8WE57 | |UniProt=F8WE57 | ||
|association_with_transcript=-24bp_to_ENST00000424988_5end | |||
|cluster_id=chr2:110873422..110873434,- | |||
|coexpression_cluster_id=C4117 | |||
|description=CAGE_peak_2_at_MALL_5end | |||
|id=chr2:110873422..110873434,- | |||
|ontology_enrichment_celltype=CL:0000066!1.71e-17!254;CL:0002078!8.09e-13!44;CL:0000115!1.20e-12!35;CL:0002139!8.00e-12!24;CL:0000220!2.46e-10!246;CL:0000076!2.75e-10!62;CL:0000071!2.93e-10!18;CL:0002546!2.93e-10!18;CL:0002321!7.20e-10!248;CL:1000497!3.16e-09!18;CL:0002518!3.16e-09!18;CL:0002076!6.03e-09!43;CL:1000449!1.17e-08!16;CL:0000222!1.35e-08!119;CL:0000213!5.42e-08!57;CL:0000215!5.42e-08!57;CL:0002368!2.68e-07!13;CL:0002681!3.31e-07!13;CL:0002584!3.31e-07!13;CL:0000223!8.87e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.90e-13;24!CL:0000115;3.94e-13;36!CL:0000071;1.71e-11;18!CL:1000497;1.90e-10;17!CL:0002518;1.90e-10;17!CL:1000449;8.72e-10;15!CL:0002078;1.14e-09;45!CL:0002681;3.89e-08;12!CL:0002584;3.89e-08;12!CL:0002368;4.09e-08;13!CL:1000746;4.86e-07;7!CL:1000612;4.86e-07;7!CL:0000213;8.19e-07;58!CL:0000215;8.19e-07;58!CL:0002202;9.97e-07;9!CL:0002632;9.97e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.41e-19,253;CL:0000115,1.37e-15,36;CL:0002078,5.45e-15,45;CL:0002139,2.40e-13,24;CL:0000071,1.50e-11,18;CL:0002546,1.50e-11,18;CL:0000076,1.62e-11,63;CL:1000497,1.64e-10,17;CL:0002518,1.64e-10,17;CL:0002321,1.78e-10,250;CL:1000449,7.11e-10,15;CL:0000213,1.16e-09,58;CL:0000215,1.16e-09,58;CL:0002076,2.26e-09,42;CL:0002681,3.30e-08,12;CL:0002584,3.30e-08,12;CL:0002368,3.75e-08,13;CL:0000223,6.84e-08,58;CL:0000222,1.80e-07,121;CL:1000746,5.14e-07,7;CL:1000612,5.14e-07,7 | |||
|ontology_enrichment_development_v019=CL:0002546;1.71e-11;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000483!2.25e-20!309;UBERON:0004111!3.00e-20!241;UBERON:0000119!7.38e-20!312;UBERON:0000467!5.43e-19!625;UBERON:0000480!9.84e-19!626;UBERON:0000468!5.34e-18!659;UBERON:0000477!3.09e-17!286;UBERON:0000481!5.34e-16!347;UBERON:0003914!8.95e-16!118;UBERON:0000464!6.76e-15!104;UBERON:0000475!6.94e-15!365;UBERON:0000025!8.21e-14!194;UBERON:0004119!1.22e-13!169;UBERON:0000925!1.22e-13!169;UBERON:0006595!1.22e-13!169;UBERON:0002100!1.43e-12!216;UBERON:0000466!3.91e-12!126;UBERON:0003103!4.25e-12!69;UBERON:0000487!5.23e-12!22;UBERON:0000064!9.25e-12!219;UBERON:0005177!1.14e-11!107;UBERON:0003104!1.93e-11!238;UBERON:0009142!1.93e-11!238;UBERON:0001008!2.02e-11!45;UBERON:0000055!2.32e-11!69;UBERON:0006554!2.96e-11!44;UBERON:0002050!4.90e-11!605;UBERON:0005423!4.90e-11!605;UBERON:0001007!5.37e-11!155;UBERON:0001555!5.37e-11!155;UBERON:0007026!5.37e-11!155;UBERON:0002049!7.08e-11!79;UBERON:0007798!7.08e-11!79;UBERON:0004921!8.01e-11!129;UBERON:0004185!8.01e-11!129;UBERON:0003064!9.58e-11!37;UBERON:0000923!9.65e-11!604;UBERON:0005291!9.65e-11!604;UBERON:0006598!9.65e-11!604;UBERON:0002532!9.65e-11!604;UBERON:0004872!1.13e-10!84;UBERON:0000922!1.52e-10!612;UBERON:0006914!1.71e-10!25;UBERON:0001986!2.93e-10!18;UBERON:0004638!2.93e-10!18;UBERON:0004852!2.93e-10!18;UBERON:0001981!6.25e-10!60;UBERON:0007500!6.25e-10!60;UBERON:0004537!6.25e-10!60;UBERON:0006965!6.25e-10!60;UBERON:0009569!1.56e-09!113;UBERON:0000058!1.87e-09!26;UBERON:0000490!3.46e-09!138;UBERON:0000062!6.91e-09!511;UBERON:0005157!8.26e-09!51;UBERON:0004211!1.17e-08!16;UBERON:0001285!1.17e-08!16;UBERON:0007684!1.17e-08!16;UBERON:0003220!1.17e-08!16;UBERON:0004208!1.17e-08!16;UBERON:0006555!1.64e-08!17;UBERON:0005103!1.64e-08!17;UBERON:0000083!1.64e-08!17;UBERON:0009201!1.64e-08!17;UBERON:0004819!1.64e-08!17;UBERON:0006553!1.64e-08!17;UBERON:0003074!1.64e-08!17;UBERON:0003060!1.64e-08!17;UBERON:0002553!1.80e-08!70;UBERON:0004876!1.98e-08!20;UBERON:0003886!2.49e-08!63;UBERON:0000080!2.80e-08!18;UBERON:0002120!2.80e-08!18;UBERON:0004875!2.80e-08!18;UBERON:0005721!2.80e-08!18;UBERON:0005754!2.80e-08!18;UBERON:0007297!2.80e-08!18;UBERON:0000077!8.25e-08!130;UBERON:0005181!8.92e-08!35;UBERON:0005178!1.19e-07!34;UBERON:0002224!1.19e-07!34;UBERON:0005153!1.21e-07!37;UBERON:0001009!1.62e-07!113;UBERON:0000915!1.92e-07!52;UBERON:0003887!2.24e-07!21;UBERON:0007196!2.31e-07!14;UBERON:0001558!2.31e-07!14;UBERON:0001225!3.31e-07!13;UBERON:0008987!3.31e-07!13;UBERON:0004535!4.56e-07!110;UBERON:0005911!5.82e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0000487;1.73e-13;22!UBERON:0006914;1.24e-11;25!UBERON:0004638;1.71e-11;18!UBERON:0001986;1.71e-11;18!UBERON:0004852;1.71e-11;18!UBERON:0006555;8.72e-10;15!UBERON:0004819;8.72e-10;15!UBERON:0001285;8.72e-10;15!UBERON:0007684;8.72e-10;15!UBERON:0006554;3.67e-09;30!UBERON:0001008;3.67e-09;30!UBERON:0000490;4.23e-09;33!UBERON:0000025;7.10e-09;93!UBERON:0000353;2.38e-08;15!UBERON:0003914;2.43e-08;74!UBERON:0001225;3.89e-08;12!UBERON:0008987;3.89e-08;12!UBERON:0007196;4.97e-08;15!UBERON:0001558;4.97e-08;15!UBERON:0005178;8.26e-08;34!UBERON:0002224;8.26e-08;34!UBERON:0005181;1.36e-07;35!UBERON:0000074;4.86e-07;7!UBERON:0001229;4.86e-07;7 | |||
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| ||
|short_description=p2@MALL | |||
}} | }} |
Latest revision as of 07:39, 16 September 2015
Short description: | p2@MALL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MALL_5end |
Coexpression cluster: | C4117_Urothelial_small_Corneal_tubular_Smooth_cervical_pharyngeal |
Association with transcript: | -24bp_to_ENST00000424988_5end |
EntrezGene: | MALL |
HGNC: | 6818 |
UniProt: | F8WE57 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.41e-19 | 253 |
endothelial cell | 1.37e-15 | 36 |
meso-epithelial cell | 5.45e-15 | 45 |
endothelial cell of vascular tree | 2.40e-13 | 24 |
blood vessel endothelial cell | 1.50e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.50e-11 | 18 |
squamous epithelial cell | 1.62e-11 | 63 |
kidney cell | 1.64e-10 | 17 |
kidney epithelial cell | 1.64e-10 | 17 |
embryonic cell | 1.78e-10 | 250 |
epithelial cell of nephron | 7.11e-10 | 15 |
lining cell | 1.16e-09 | 58 |
barrier cell | 1.16e-09 | 58 |
endo-epithelial cell | 2.26e-09 | 42 |
kidney cortical cell | 3.30e-08 | 12 |
renal cortical epithelial cell | 3.30e-08 | 12 |
respiratory epithelial cell | 3.75e-08 | 13 |
endodermal cell | 6.84e-08 | 58 |
mesodermal cell | 1.80e-07 | 121 |
glomerular cell | 5.14e-07 | 7 |
kidney corpuscule cell | 5.14e-07 | 7 |