FFCP PHASE1:Hg19::chr2:206950728..206950740,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:206950728..206950740,- to FFCP PHASE1:Hg19::chr2:206950728..206950740,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54891 | |EntrezGene=54891 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25997 | |HGNC=25997 | ||
|TSSclassifier=strong | |||
|UniProt=Q53TQ3 | |UniProt=Q53TQ3 | ||
|association_with_transcript=165bp_to_ENST00000233270,ENST00000403263,NM_017759,uc002vaz.3_5end | |||
|cluster_id=chr2:206950728..206950740,- | |||
|description=CAGE_peak_4_at_INO80D_5end | |||
|id=chr2:206950728..206950740,- | |||
|ontology_enrichment_celltype=CL:0002057!1.95e-12!42;CL:0000860!1.58e-11!45;CL:0000557!9.17e-10!71;CL:0000766!1.08e-09!76;CL:0000738!3.22e-09!140;CL:0000763!3.44e-09!112;CL:0000049!3.44e-09!112;CL:0000037!9.56e-09!172;CL:0000566!9.56e-09!172;CL:0000839!9.57e-09!70;CL:0000988!2.78e-08!182;CL:0002032!9.50e-08!165;CL:0000837!9.50e-08!165;CL:0002009!1.31e-07!65;CL:0002031!4.59e-07!124;CL:0002194!6.76e-07!63;CL:0000576!6.76e-07!63;CL:0000040!6.76e-07!63;CL:0000559!6.76e-07!63 | |||
|ontology_enrichment_celltype_v019=CL:0002393;2.25e-11;6!CL:0002397;2.25e-11;6!CL:0000576;4.06e-09;48!CL:0000766;2.92e-08;69!CL:0000860;3.47e-08;33!CL:0002057;3.47e-08;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,7.32e-19,72;CL:0000557,1.43e-17,67;CL:0000763,3.38e-16,108;CL:0000049,3.38e-16,108;CL:0000860,2.48e-15,42;CL:0002057,2.48e-15,42;CL:0000839,1.93e-14,66;CL:0000738,2.35e-14,136;CL:0000037,1.37e-13,168;CL:0000988,1.98e-13,177;CL:0002009,4.12e-13,61;CL:0000473,7.27e-13,48;CL:0000234,7.27e-13,48;CL:0002194,4.19e-12,59;CL:0000576,4.19e-12,59;CL:0000040,4.19e-12,59;CL:0000559,4.19e-12,59;CL:0002032,9.83e-12,161;CL:0000837,9.83e-12,161;CL:0002031,9.82e-10,120;CL:0002087,1.15e-07,115;CL:0002393,1.28e-07,9;CL:0002397,1.28e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.51e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.37e-10!115;UBERON:0002390!3.49e-09!102;UBERON:0003061!3.49e-09!102;UBERON:0001474!5.39e-09!86;UBERON:0002193!5.49e-09!112;UBERON:0002371!8.90e-09!80 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.41e-16,76;UBERON:0001474,5.61e-16,82;UBERON:0002390,7.09e-15,98;UBERON:0003061,7.09e-15,98;UBERON:0002193,4.55e-14,108;UBERON:0004765,5.75e-14,90;UBERON:0002405,2.38e-13,93;UBERON:0001434,6.45e-12,100 | |||
|phase1_expression=0.363356758541113,0,0.704772020479856,1.0007329835313,0,0,0,0,0.522371256399677,0.491467873003018,0.697801167972428,0,0,0.123766352960047,0,0,0.602694528023977,0,0,0,0,0.313454721478088,0.572471974262113,0.273748850145768,0,0.0764134057479513,0.164201178899891,0.0787107813136792,0.393364276848904,1.15148819429164,1.08371286321253,0,0,0,0.0774672005803016,0.284338464974843,1.17440175733939,1.66198622559563,2.60707781711184,1.51907609501096,1.11957737119962,0.32389366601898,0.77272670290256,0.290796477559129,0.755751887377619,0.970336244751265,2.09186133215116,1.6446715520873,0.309706370895104,0.28769239232215,0.256160706529101,1.6553756092201,2.41321976515633,2.5819387343353,0,0.188242339542605,0.545812300115692,1.57306439111559,0.306083892370903,1.28371610830437,0.639337125799041,1.31940520074686,0.398927315243264,0.426224750532694,0,1.13477044938228,1.24564449799115,0.75374599577023,0.521482918420201,0.65156653411535,0.605399502633369,3.68277635987565,1.58231193720442,1.05627643155971,0.637812899895131,1.25795187305026,0.786300418025466,0.901061357049038,0.803627933485401,0.285012743741249,0.39783335439818,0.365328307529268,1.75996244461323,0,0,0.853460445133014,0,1.14950487990897,0,0,0.569212969109448,1.17447437874188,0,1.32171328579026,3.36305137788922,1.31692042387539,0.786839080455332,1.57204305099666,0.411202997999018,0.501559486172034,0.32592226663359,0.946895611469467,0,0.557052284425868,0.589211814949674,0,0.270803863765016,0.25618263945135,0.260118695119756,0.164437904603676,0.552700035571697,0,0.14828656316206,0,0,0.339928028092699,0,0,0,0.637130828648193,0,0,0.150575119077773,0.383959833463255,0,0.473554504088034,0,0.403213486449465,0.534880391567015,0.434473211648397,0,0,0,0.722878304769133,0,0.289693037921647,0,0,0.189069634328136,0.221729397462564,0.263504357079378,0.851363990735132,0,0,0,0,0.132957960518865,1.43094374583205,1.14398982156026,0.371457501329565,0,0,0,0,0,0.275118041940067,0,0,0.35576626268671,0.33472061276467,0.805658634218294,0,0.24406205754817,0.735326160691737,0,0.0892997282840798,0,0,0,0.949265659568129,0,1.31780417436063,0,0,0,0.12663051166458,0.397227542439656,0.573673241497627,0,0,0,0.24666754841716,0.311211035399766,0.134710672069688,0.163461903113459,0.454072282934794,0,0,0,0.570471821544449,0.149448680551801,0.117434498643765,0.161872944368132,0.140450806702248,0.408308342509787,0.122834317311768,0.103325781175765,0,0.247266929278557,1.82032272387605,0,0,0.125118519871964,0,0,0,0,0.113432183160021,0,0.213557388818567,0.423863802319124,0.600182192168805,0,0.257640540045629,0.18611685633159,0.168776332241266,0.0974370051611986,0.252433774244115,0.552299391853796,0.161646056818812,0.710019185033229,0.403008392910561,0,0,0.545492241181669,0.286804595389004,0.487894824518382,0.265059536642971,0.348581828608555,0.621966330092223,0.504641701751257,0.36497735907583,0,0,0,0,0.721879481669586,0.118306800039844,0,0.482022059766964,0,0,0.71181185733329,0.134831308160164,0.392442930250692,0.38474715694639,0,0,0,0,0,0.982827216677626,0,0,0.122988438543114,0.171567810298526,0.219500570817251,1.1240175325762,0.402115889646523,0.277765335475589,0,0,0,0,0,0.433099343283221,0,0.380508304469197,0,0.858486162094873,0.492434012174795,0.234004265139238,0,0,0.16798212819886,0.425325291727159,0.179117045405697,0.290633938513962,0.383382679165211,2.46331618947972,0.44024217006613,1.03664057770386,0.864719720501769,1.13618190083742,0.063497894292169,0.381988425558278,0,0,0.102827492703324,0,0,0,0.43596006883328,0.07333828582095,0.387815147273333,0,0,0,0,0.257207374262142,0,0,0.285955987316295,0,0,0,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0.479249710983165,0,0,0.144781306667579,0.61642896765115,0.179060963239896,0.336255431980582,0.591092280605782,0.862510299438069,0.898401253958239,1.01637849688985,1.30139853857622,0,0.335032530668698,1.27587750330633,0,2.99161459204025,0.828831026872071,0.24538298343828,0,0.271265023699736,0.623912584592421,0.178428988797162,0,0.117141414992713,0,0,0,0.664225598535437,0.368738337083406,0.434418072340414,0.195801157462741,0.343143423810856,1.24060815673732,0.862856803274467,0.320182673410333,0.606255142892519,0,0,0,0.153461973288062,0,0.384417447767103,0,0.321707842287215,0,0.308419387605311,0.177561725313127,0.164254312027618,0.519254429183621,0,0.241718899183244,0.200506470303285,0.0920809889358963,0.229628896329213,0.182091168006717,0.131124414959424,0,0.0770153371044148,0,0,0.105551628892876,0,0.340187410553031,0.431831832204279,0,0,0,0,0,0,0.657779629937804,0.261435451024901,0,0,0.325378394664303,0.309123034943167,0.0915694648183434,0.742585499285292,0,0,0,0,0,0.15350367472613,0.137836572484531,0.214840489736547,0.290033387828457,0.340906509664404,0.0890320356467374,0.165284915360978,0.384380134730212,1.02090169995667,0.10115778085555,0,0.94443704049192,0.6970372701606,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0.179872457583315,0.274537029736055,0.117812402345686,0.202182481573316,0,0,0,0,1.05650146756755,0.136499911407986,0.565621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|phase1_expression=0.363356758541113,0,0.704772020479856,1.0007329835313,0,0,0,0,0.522371256399677,0.491467873003018,0.697801167972428,0,0,0.123766352960047,0,0,0.602694528023977,0,0,0,0,0.313454721478088,0.572471974262113,0.273748850145768,0,0.0764134057479513,0.164201178899891,0.0787107813136792,0.393364276848904,1.15148819429164,1.08371286321253,0,0,0,0.0774672005803016,0.284338464974843,1.17440175733939,1.66198622559563,2.60707781711184,1.51907609501096,1.11957737119962,0.32389366601898,0.77272670290256,0.290796477559129,0.755751887377619,0.970336244751265,2.09186133215116,1.6446715520873,0.309706370895104,0.28769239232215,0.256160706529101,1.6553756092201,2.41321976515633,2.5819387343353,0,0.188242339542605,0.545812300115692,1.57306439111559,0.306083892370903,1.28371610830437,0.639337125799041,1.31940520074686,0.398927315243264,0.426224750532694,0,1.13477044938228,1.24564449799115,0.75374599577023,0.521482918420201,0.65156653411535,0.605399502633369,3.68277635987565,1.58231193720442,1.05627643155971,0.637812899895131,1.25795187305026,0.786300418025466,0.901061357049038,0.803627933485401,0.285012743741249,0.39783335439818,0.365328307529268,1.75996244461323,0,0,0.853460445133014,0,1.14950487990897,0,0,0.569212969109448,1.17447437874188,0,1.32171328579026,3.36305137788922,1.31692042387539,0.786839080455332,1.57204305099666,0.411202997999018,0.501559486172034,0.32592226663359,0.946895611469467,0,0.557052284425868,0.589211814949674,0,0.270803863765016,0.25618263945135,0.260118695119756,0.164437904603676,0.552700035571697,0,0.14828656316206,0,0,0.339928028092699,0,0,0,0.637130828648193,0,0,0.150575119077773,0.383959833463255,0,0.473554504088034,0,0.403213486449465,0.534880391567015,0.434473211648397,0,0,0,0.722878304769133,0,0.289693037921647,0,0,0.189069634328136,0.221729397462564,0.263504357079378,0.851363990735132,0,0,0,0,0.132957960518865,1.43094374583205,1.14398982156026,0.371457501329565,0,0,0,0,0,0.275118041940067,0,0,0.35576626268671,0.33472061276467,0.805658634218294,0,0.24406205754817,0.735326160691737,0,0.0892997282840798,0,0,0,0.949265659568129,0,1.31780417436063,0,0,0,0.12663051166458,0.397227542439656,0.573673241497627,0,0,0,0.24666754841716,0.311211035399766,0.134710672069688,0.163461903113459,0.454072282934794,0,0,0,0.570471821544449,0.149448680551801,0.117434498643765,0.161872944368132,0.140450806702248,0.408308342509787,0.122834317311768,0.103325781175765,0,0.247266929278557,1.82032272387605,0,0,0.125118519871964,0,0,0,0,0.113432183160021,0,0.213557388818567,0.423863802319124,0.600182192168805,0,0.257640540045629,0.18611685633159,0.168776332241266,0.0974370051611986,0.252433774244115,0.552299391853796,0.161646056818812,0.710019185033229,0.403008392910561,0,0,0.545492241181669,0.286804595389004,0.487894824518382,0.265059536642971,0.348581828608555,0.621966330092223,0.504641701751257,0.36497735907583,0,0,0,0,0.721879481669586,0.118306800039844,0,0.482022059766964,0,0,0.71181185733329,0.134831308160164,0.392442930250692,0.38474715694639,0,0,0,0,0,0.982827216677626,0,0,0.122988438543114,0.171567810298526,0.219500570817251,1.1240175325762,0.402115889646523,0.277765335475589,0,0,0,0,0,0.433099343283221,0,0.380508304469197,0,0.858486162094873,0.492434012174795,0.234004265139238,0,0,0.16798212819886,0.425325291727159,0.179117045405697,0.290633938513962,0.383382679165211,2.46331618947972,0.44024217006613,1.03664057770386,0.864719720501769,1.13618190083742,0.063497894292169,0.381988425558278,0,0,0.102827492703324,0,0,0,0.43596006883328,0.07333828582095,0.387815147273333,0,0,0,0,0.257207374262142,0,0,0.285955987316295,0,0,0,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0.479249710983165,0,0,0.144781306667579,0.61642896765115,0.179060963239896,0.336255431980582,0.591092280605782,0.862510299438069,0.898401253958239,1.01637849688985,1.30139853857622,0,0.335032530668698,1.27587750330633,0,2.99161459204025,0.828831026872071,0.24538298343828,0,0.271265023699736,0.623912584592421,0.178428988797162,0,0.117141414992713,0,0,0,0.664225598535437,0.368738337083406,0.434418072340414,0.195801157462741,0.343143423810856,1.24060815673732,0.862856803274467,0.320182673410333,0.606255142892519,0,0,0,0.153461973288062,0,0.384417447767103,0,0.321707842287215,0,0.308419387605311,0.177561725313127,0.164254312027618,0.519254429183621,0,0.241718899183244,0.200506470303285,0.0920809889358963,0.229628896329213,0.182091168006717,0.131124414959424,0,0.0770153371044148,0,0,0.105551628892876,0,0.340187410553031,0.431831832204279,0,0,0,0,0,0,0.657779629937804,0.261435451024901,0,0,0.325378394664303,0.309123034943167,0.0915694648183434,0.742585499285292,0,0,0,0,0,0.15350367472613,0.137836572484531,0.214840489736547,0.290033387828457,0.340906509664404,0.0890320356467374,0.165284915360978,0.384380134730212,1.02090169995667,0.10115778085555,0,0.94443704049192,0.6970372701606,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0.179872457583315,0.274537029736055,0.117812402345686,0.202182481573316,0,0,0,0,1.05650146756755,0.136499911407986,0.565621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| ||
|short_description=p4@INO80D | |||
}} | }} |
Latest revision as of 17:32, 19 September 2015
Short description: | p4@INO80D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_INO80D_5end |
Coexpression cluster: | NA |
Association with transcript: | 165bp_to_ENST00000233270, ENST00000403263, NM_017759, uc002vaz.3_5end |
EntrezGene: | INO80D |
HGNC: | 25997 |
UniProt: | Q53TQ3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 7.32e-19 | 72 |
granulocyte monocyte progenitor cell | 1.43e-17 | 67 |
myeloid cell | 3.38e-16 | 108 |
common myeloid progenitor | 3.38e-16 | 108 |
classical monocyte | 2.48e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.48e-15 | 42 |
myeloid lineage restricted progenitor cell | 1.93e-14 | 66 |
leukocyte | 2.35e-14 | 136 |
hematopoietic stem cell | 1.37e-13 | 168 |
hematopoietic cell | 1.98e-13 | 177 |
macrophage dendritic cell progenitor | 4.12e-13 | 61 |
defensive cell | 7.27e-13 | 48 |
phagocyte | 7.27e-13 | 48 |
monopoietic cell | 4.19e-12 | 59 |
monocyte | 4.19e-12 | 59 |
monoblast | 4.19e-12 | 59 |
promonocyte | 4.19e-12 | 59 |
hematopoietic oligopotent progenitor cell | 9.83e-12 | 161 |
hematopoietic multipotent progenitor cell | 9.83e-12 | 161 |
hematopoietic lineage restricted progenitor cell | 9.82e-10 | 120 |
nongranular leukocyte | 1.15e-07 | 115 |
intermediate monocyte | 1.28e-07 | 9 |
CD14-positive, CD16-positive monocyte | 1.28e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.41e-16 | 76 |
bone element | 5.61e-16 | 82 |
hematopoietic system | 7.09e-15 | 98 |
blood island | 7.09e-15 | 98 |
hemolymphoid system | 4.55e-14 | 108 |
skeletal element | 5.75e-14 | 90 |
immune system | 2.38e-13 | 93 |
skeletal system | 6.45e-12 | 100 |